5EF4 - Sequence, Chains, Asymmetric and Biological Units

• Title: 2.05 A CRYSTAL STRUCTURE OF THE AMB A 11 CYSTEINE PROTEASE, RAGWEED POLLEN ALLERGEN, IN ITS PROFORM
• Keywords: ALLERGEN, RAGWEED, CYSTEINE PROTEASE, PROPEPTIDE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5EF4	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	CYSTEINE PROTEASE	A	328	2593	0
2	Protein	CYSTEINE PROTEASE	B	322	2535	0
3	Ligand	CYSTEINE PROTEASE	A	4	0	24
4	Water			282	0	282
total				936	5128	306

Proteins

Unit 1

SER 5 HIS 6 HIS 7 HIS 8 HIS 9 HIS 10 HIS 11 SER 12 HIS 21 MET 22 PHE 23 HIS 24 TYR 25 HIS 26 GLU 27 ARG 28 GLU 29 LEU 30 GLU 31 SER 32 GLU 33 GLU 34 GLY 35 PHE 36 MET 37 GLY 38 MET 39 TYR 40 ASP 41 ARG 42 TRP 43 ARG 44 GLU 45 GLN 46 HIS 47 ASN 48 ILE 49 GLU 50 MET 51 ARG 52 SER 53 PRO 54 GLU 55 ARG 56 PHE 57 ASN 58 VAL 59 PHE 60 LYS 61 TYR 62 ASN 63 VAL 64 ARG 65 ARG 66 ILE 67 HIS 68 GLU 69 SER 70 ASN 71 LYS 72 MET 73 ASP 74 LYS 75 PRO 76 TYR 77 LYS 78 LEU 79 LYS 80 VAL 81 ASN 82 GLU 83 PHE 84 ALA 85 ASP 86 MET 87 THR 88 ASN 89 LEU 90 GLU 91 PHE 92 VAL 93 ASN 94 THR 95 TYR 96 ALA 97 ASN 98 SER 99 LYS 100 ILE 101 SER 102 HIS 103 PHE 104 GLN 105 ALA 106 LEU 107 ARG 108 GLY 109 SER 110 ALA 111 PRO 112 GLY 113 SER 114 LYS 121 ASP 122 PHE 123 ILE 124 TYR 125 ALA 126 ASN 127 VAL 128 THR 129 LYS 130 ILE 131 PRO 132 ASP 133 LYS 134 VAL 135 ASP 136 TRP 137 ARG 138 GLU 139 LYS 140 ASN 141 ALA 142 VAL 143 THR 144 ASP 145 VAL 146 LYS 147 GLY 148 GLN 149 GLY 150 GLY 151 CYS 152 GLY 153 SER 154 CYS 155 TRP 156 ALA 157 PHE 158 ALA 159 ALA 160 VAL 161 VAL 162 ALA 163 LEU 164 GLU 165 GLY 166 ILE 167 ASN 168 ALA 169 ILE 170 ARG 171 THR 172 GLY 173 LYS 174 LEU 175 VAL 176 LYS 177 PHE 178 SER 179 GLU 180 GLN 181 GLN 182 LEU 183 VAL 184 ASP 185 CYS 186 ASP 187 MET 188 THR 189 ASN 190 ALA 191 GLY 192 CYS 193 ASP 194 GLY 195 GLY 196 LEU 197 MET 198 GLU 199 PRO 200 ALA 201 PHE 202 THR 203 TYR 204 VAL 205 ILE 206 LYS 207 HIS 208 GLY 209 GLY 210 ILE 211 ALA 212 PRO 213 GLU 214 ALA 215 SER 216 TYR 217 PRO 218 TYR 219 VAL 220 GLY 221 LYS 222 ARG 223 GLU 224 THR 225 CYS 226 ASP 227 LYS 228 ALA 229 LYS 230 ILE 231 LYS 232 ASP 233 VAL 234 LEU 235 LYS 236 ILE 237 ASP 238 GLY 239 ARG 240 GLN 241 ASN 242 VAL 243 PRO 244 GLY 245 LEU 246 ASP 247 GLU 248 GLU 249 ALA 250 LEU 251 ARG 252 LYS 253 ALA 254 VAL 255 ALA 256 HIS 257 GLN 258 PRO 259 VAL 260 ALA 261 THR 262 GLY 263 ILE 264 GLN 265 LEU 266 SER 267 GLY 268 HIS 269 GLY 270 LEU 271 GLN 272 PHE 273 TYR 274 SER 275 GLU 276 GLY 277 VAL 278 TYR 279 THR 280 GLY 281 ASP 282 CYS 283 GLY 284 THR 285 GLU 286 PRO 287 ASN 288 HIS 289 GLY 290 VAL 291 GLY 292 ILE 293 VAL 294 GLY 295 TYR 296 GLY 297 GLU 298 ASN 299 GLU 300 LYS 301 GLY 302 ILE 303 LYS 304 PHE 305 TRP 306 THR 307 VAL 308 LYS 309 ASN 310 SER 311 TRP 312 GLY 313 PRO 314 THR 315 TRP 316 GLY 317 GLU 318 LYS 319 GLY 320 TYR 321 ILE 322 HIS 323 LEU 324 GLN 325 ARG 326 GLY 327 ALA 328 ARG 329 LYS 330 GLU 331 GLY 332 LEU 333 CYS 334 GLY 335 VAL 336 ALA 337 MET 338 HIS 339 SER 340 SER 341 PHE 342 PRO 343 ILE 344 MET 345 ASN 346

Unit 2

HIS 21 MET 22 PHE 23 HIS 24 TYR 25 HIS 26 GLU 27 ARG 28 GLU 29 LEU 30 GLU 31 SER 32 GLU 33 GLU 34 GLY 35 PHE 36 MET 37 GLY 38 MET 39 TYR 40 ASP 41 ARG 42 TRP 43 ARG 44 GLU 45 GLN 46 HIS 47 ASN 48 ILE 49 GLU 50 MET 51 ARG 52 SER 53 PRO 54 GLU 55 ARG 56 PHE 57 ASN 58 VAL 59 PHE 60 LYS 61 TYR 62 ASN 63 VAL 64 ARG 65 ARG 66 ILE 67 HIS 68 GLU 69 SER 70 ASN 71 LYS 72 MET 73 ASP 74 LYS 75 PRO 76 TYR 77 LYS 78 LEU 79 LYS 80 VAL 81 ASN 82 GLU 83 PHE 84 ALA 85 ASP 86 MET 87 THR 88 ASN 89 LEU 90 GLU 91 PHE 92 VAL 93 ASN 94 THR 95 TYR 96 ALA 97 ASN 98 SER 99 LYS 100 ILE 101 SER 102 HIS 103 PHE 104 GLN 105 ALA 106 LEU 107 ARG 108 GLY 109 SER 110 ALA 111 PRO 112 GLY 113 SER 114 ILE 115 ASP 122 PHE 123 ILE 124 TYR 125 ALA 126 ASN 127 VAL 128 THR 129 LYS 130 ILE 131 PRO 132 ASP 133 LYS 134 VAL 135 ASP 136 TRP 137 ARG 138 GLU 139 LYS 140 ASN 141 ALA 142 VAL 143 THR 144 ASP 145 VAL 146 LYS 147 GLY 148 GLN 149 GLY 150 GLY 151 CYS 152 GLY 153 SER 154 CYS 155 TRP 156 ALA 157 PHE 158 ALA 159 ALA 160 VAL 161 VAL 162 ALA 163 LEU 164 GLU 165 GLY 166 ILE 167 ASN 168 ALA 169 ILE 170 ARG 171 THR 172 GLY 173 LYS 174 LEU 175 VAL 176 LYS 177 PHE 178 SER 179 GLU 180 GLN 181 GLN 182 LEU 183 VAL 184 ASP 185 CYS 186 ASP 187 MET 188 THR 189 ASN 190 ALA 191 GLY 192 CYS 193 ASP 194 GLY 195 GLY 196 LEU 197 MET 198 GLU 199 PRO 200 ALA 201 PHE 202 THR 203 TYR 204 VAL 205 ILE 206 LYS 207 HIS 208 GLY 209 GLY 210 ILE 211 ALA 212 PRO 213 GLU 214 ALA 215 SER 216 TYR 217 PRO 218 TYR 219 VAL 220 GLY 221 LYS 222 ARG 223 GLU 224 THR 225 CYS 226 ASP 227 LYS 228 ALA 229 LYS 230 ILE 231 LYS 232 ASP 233 VAL 234 LEU 235 LYS 236 ILE 237 ASP 238 GLY 239 ARG 240 GLN 241 ASN 242 VAL 243 PRO 244 GLY 245 LEU 246 ASP 247 GLU 248 GLU 249 ALA 250 LEU 251 ARG 252 LYS 253 ALA 254 VAL 255 ALA 256 HIS 257 GLN 258 PRO 259 VAL 260 ALA 261 THR 262 GLY 263 ILE 264 GLN 265 LEU 266 SER 267 GLY 268 HIS 269 GLY 270 LEU 271 GLN 272 PHE 273 TYR 274 SER 275 GLU 276 GLY 277 VAL 278 TYR 279 THR 280 GLY 281 ASP 282 CYS 283 GLY 284 THR 285 GLU 286 PRO 287 ASN 288 HIS 289 GLY 290 VAL 291 GLY 292 ILE 293 VAL 294 GLY 295 TYR 296 GLY 297 GLU 298 ASN 299 GLU 300 LYS 301 GLY 302 ILE 303 LYS 304 PHE 305 TRP 306 THR 307 VAL 308 LYS 309 ASN 310 SER 311 TRP 312 GLY 313 PRO 314 THR 315 TRP 316 GLY 317 GLU 318 LYS 319 GLY 320 TYR 321 ILE 322 HIS 323 LEU 324 GLN 325 ARG 326 GLY 327 ALA 328 ARG 329 LYS 330 GLU 331 GLY 332 LEU 333 CYS 334 GLY 335 VAL 336 ALA 337 MET 338 HIS 339 SER 340 SER 341 PHE 342 PRO 343 ILE 344 MET 345 ASN 346 ASP 347 PRO 348

Ligands

Unit 3

GOL 501 GOL 502 GOL 503 GOL 504