5EE4 - Sequence, Chains, Asymmetric and Biological Units

• Title: THE CRYSTAL STRUCTURE OF HPUA FROM KINGELLA DENITRIFICANS IN WITH HUMAN HAEMOGLOBIN
• Keywords: OUTER MEMBRANE, RECEPTOR, BETA BARREL, METAL TRANSPORT
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5EE4	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	HPUA	A	297	2195	0
2	Protein	HPUA	B	298	2206	0
3	Protein	HEMOGLOBIN SUBUNIT ALPHA	C	141	1068	0
4	Protein	HEMOGLOBIN SUBUNIT BETA	D	146	1122	0
5	Protein	HEMOGLOBIN SUBUNIT ALPHA	E	141	1068	0
6	Protein	HEMOGLOBIN SUBUNIT BETA	F	141	1083	0
7	Ligand	HPUA	A	1	0	6
8	Ligand	HEMOGLOBIN SUBUNIT ALPHA	C	2	0	45
9	Ligand	HEMOGLOBIN SUBUNIT BETA	D	3	0	51
10	Ligand	HEMOGLOBIN SUBUNIT ALPHA	E	2	0	45
11	Ligand	HEMOGLOBIN SUBUNIT BETA	F	2	0	45
12	Water			374	0	374
total				1548	8742	566

Proteins

Unit 1	PRO 15 ILE 16 PRO 17 VAL 18 LEU 19 ARG 20 ALA 21 VAL 22 ASP 23 THR 24 THR 25 SER 26 PRO 27 ASN 28 ILE 29 VAL 30 ALA 31 ASP 32 THR 33 SER 34 THR 35 ASP 36 ARG 37 GLU 38 GLN 39 ARG 40 THR 41 PHE 42 ALA 43 THR 44 GLN 45 GLY 46 GLY 47 SER 48 VAL 49 LYS 50 PRO 51 PHE 52 THR 53 ILE 54 THR 55 LYS 56 PRO 57 SER 58 PRO 59 TYR 60 ILE 61 PRO 62 GLY 63 LEU 64 MET 65 LEU 66 THR 67 ASN 68 GLN 69 GLU 70 ILE 71 LEU 72 TYR 73 GLN 74 ALA 75 PRO 76 ASP 77 GLY 78 LYS 79 TYR 80 TYR 81 ASP 82 PHE 83 GLY 84 THR 85 TYR 86 ASN 87 THR 88 LEU 89 ILE 90 MET 91 PRO 92 SER 93 SER 94 SER 95 THR 96 SER 97 ALA 98 ARG 99 VAL 100 LEU 101 PRO 102 ASN 103 SER 104 HIS 105 PRO 106 MET 107 GLN 108 PRO 109 LEU 110 ASP 111 SER 112 GLY 113 GLY 114 LYS 115 MET 116 ILE 117 ALA 118 CYS 119 CYS 120 THR 121 ASN 122 GLN 123 THR 124 SER 125 THR 126 GLY 127 MET 128 ASN 129 ALA 130 LEU 131 ARG 132 LEU 133 LYS 134 SER 135 MET 136 GLN 137 PHE 138 GLY 139 ALA 140 TRP 141 MET 142 SER 143 PRO 144 SER 145 LYS 146 THR 147 VAL 148 SER 149 LEU 150 PHE 151 ALA 152 GLY 153 GLY 154 THR 155 PRO 156 ALA 157 PRO 158 THR 159 ASP 160 THR 161 LEU 162 GLN 163 GLY 164 VAL 165 ASP 166 THR 167 ALA 168 GLY 169 ARG 170 PRO 171 THR 172 GLY 173 LYS 174 ALA 175 THR 176 TYR 177 GLU 178 VAL 179 ILE 180 GLY 181 LEU 182 ARG 183 VAL 184 LYS 185 ASN 186 ASP 187 ARG 188 ALA 189 VAL 190 THR 191 SER 192 SER 193 TYR 194 GLU 195 THR 196 VAL 206 VAL 207 THR 208 GLY 209 SER 210 PHE 211 LEU 212 THR 213 VAL 214 ASN 215 PHE 216 ASN 217 THR 218 GLY 219 LYS 220 LEU 221 GLY 222 GLY 223 THR 224 ILE 225 VAL 226 GLY 227 ASN 228 SER 229 GLU 230 PHE 231 GLY 232 ASP 233 SER 234 ILE 235 GLU 236 MET 237 ARG 238 ASP 239 VAL 240 ASN 241 VAL 242 ASN 243 GLY 244 ASN 245 GLN 246 PHE 247 SER 248 GLY 249 THR 250 ALA 251 SER 252 SER 253 GLY 254 GLY 255 HIS 256 THR 257 GLY 258 GLN 259 VAL 260 SER 261 GLY 262 GLY 263 LEU 264 PHE 265 ALA 266 LYS 267 GLU 268 GLU 269 ARG 270 PHE 271 TYR 272 SER 273 GLY 274 THR 275 LEU 276 GLU 277 HIS 278 PRO 279 SER 280 GLY 281 GLY 282 GLU 283 ILE 284 GLY 285 GLY 286 THR 287 VAL 288 ASN 289 PHE 290 GLY 291 SER 292 ASN 293 SER 294 PRO 295 LEU 296 ASN 297 ALA 298 SER 299 PHE 300 GLY 301 GLY 302 THR 303 ARG 304 ARG 305 GLU 306 TYR 307 ASN 308 ALA 309 ALA 310 ASP 311 THR 312 SER 313 THR 314 ASP 315 THR 316 SER 317 HIS 318 LEU 319 VAL 320
Unit 2	PRO 15 ILE 16 PRO 17 VAL 18 LEU 19 ARG 20 ALA 21 VAL 22 ASP 23 THR 24 THR 25 SER 26 PRO 27 ASN 28 ILE 29 VAL 30 ALA 31 ASP 32 THR 33 SER 34 THR 35 ASP 36 ARG 37 GLU 38 GLN 39 ARG 40 THR 41 PHE 42 ALA 43 THR 44 GLN 45 GLY 46 GLY 47 SER 48 VAL 49 LYS 50 PRO 51 PHE 52 THR 53 ILE 54 THR 55 LYS 56 PRO 57 SER 58 PRO 59 TYR 60 ILE 61 PRO 62 GLY 63 LEU 64 MET 65 LEU 66 THR 67 ASN 68 GLN 69 GLU 70 ILE 71 LEU 72 TYR 73 GLN 74 ALA 75 PRO 76 ASP 77 GLY 78 LYS 79 TYR 80 TYR 81 ASP 82 PHE 83 GLY 84 THR 85 TYR 86 ASN 87 THR 88 LEU 89 ILE 90 MET 91 PRO 92 SER 93 SER 94 SER 95 THR 96 SER 97 ALA 98 ARG 99 VAL 100 LEU 101 PRO 102 ASN 103 SER 104 HIS 105 PRO 106 MET 107 GLN 108 PRO 109 LEU 110 ASP 111 SER 112 GLY 113 GLY 114 LYS 115 MET 116 ILE 117 ALA 118 CYS 119 CYS 120 THR 121 ASN 122 GLN 123 THR 124 SER 125 THR 126 GLY 127 MET 128 ASN 129 ALA 130 LEU 131 ARG 132 LEU 133 LYS 134 SER 135 MET 136 GLN 137 PHE 138 GLY 139 ALA 140 TRP 141 MET 142 SER 143 PRO 144 SER 145 LYS 146 THR 147 VAL 148 SER 149 LEU 150 PHE 151 ALA 152 GLY 153 GLY 154 THR 155 PRO 156 ALA 157 PRO 158 THR 159 ASP 160 THR 161 LEU 162 GLN 163 GLY 164 VAL 165 ASP 166 THR 167 ALA 168 GLY 169 ARG 170 PRO 171 THR 172 GLY 173 LYS 174 ALA 175 THR 176 TYR 177 GLU 178 VAL 179 ILE 180 GLY 181 LEU 182 ARG 183 VAL 184 LYS 185 ASN 186 ASP 187 ARG 188 ALA 189 VAL 190 THR 191 SER 192 SER 193 TYR 194 GLU 195 THR 196 ARG 197 VAL 206 VAL 207 THR 208 GLY 209 SER 210 PHE 211 LEU 212 THR 213 VAL 214 ASN 215 PHE 216 ASN 217 THR 218 GLY 219 LYS 220 LEU 221 GLY 222 GLY 223 THR 224 ILE 225 VAL 226 GLY 227 ASN 228 SER 229 GLU 230 PHE 231 GLY 232 ASP 233 SER 234 ILE 235 GLU 236 MET 237 ARG 238 ASP 239 VAL 240 ASN 241 VAL 242 ASN 243 GLY 244 ASN 245 GLN 246 PHE 247 SER 248 GLY 249 THR 250 ALA 251 SER 252 SER 253 GLY 254 GLY 255 HIS 256 THR 257 GLY 258 GLN 259 VAL 260 SER 261 GLY 262 GLY 263 LEU 264 PHE 265 ALA 266 LYS 267 GLU 268 GLU 269 ARG 270 PHE 271 TYR 272 SER 273 GLY 274 THR 275 LEU 276 GLU 277 HIS 278 PRO 279 SER 280 GLY 281 GLY 282 GLU 283 ILE 284 GLY 285 GLY 286 THR 287 VAL 288 ASN 289 PHE 290 GLY 291 SER 292 ASN 293 SER 294 PRO 295 LEU 296 ASN 297 ALA 298 SER 299 PHE 300 GLY 301 GLY 302 THR 303 ARG 304 ARG 305 GLU 306 TYR 307 ASN 308 ALA 309 ALA 310 ASP 311 THR 312 SER 313 THR 314 ASP 315 THR 316 SER 317 HIS 318 LEU 319 VAL 320
Unit 3	VAL 1 LEU 2 SER 3 PRO 4 ALA 5 ASP 6 LYS 7 THR 8 ASN 9 VAL 10 LYS 11 ALA 12 ALA 13 TRP 14 GLY 15 LYS 16 VAL 17 GLY 18 ALA 19 HIS 20 ALA 21 GLY 22 GLU 23 TYR 24 GLY 25 ALA 26 GLU 27 ALA 28 LEU 29 GLU 30 ARG 31 MET 32 PHE 33 LEU 34 SER 35 PHE 36 PRO 37 THR 38 THR 39 LYS 40 THR 41 TYR 42 PHE 43 PRO 44 HIS 45 PHE 46 ASP 47 LEU 48 SER 49 HIS 50 GLY 51 SER 52 ALA 53 GLN 54 VAL 55 LYS 56 GLY 57 HIS 58 GLY 59 LYS 60 LYS 61 VAL 62 ALA 63 ASP 64 ALA 65 LEU 66 THR 67 ASN 68 ALA 69 VAL 70 ALA 71 HIS 72 VAL 73 ASP 74 ASP 75 MET 76 PRO 77 ASN 78 ALA 79 LEU 80 SER 81 ALA 82 LEU 83 SER 84 ASP 85 LEU 86 HIS 87 ALA 88 HIS 89 LYS 90 LEU 91 ARG 92 VAL 93 ASP 94 PRO 95 VAL 96 ASN 97 PHE 98 LYS 99 LEU 100 LEU 101 SER 102 HIS 103 CYS 104 LEU 105 LEU 106 VAL 107 THR 108 LEU 109 ALA 110 ALA 111 HIS 112 LEU 113 PRO 114 ALA 115 GLU 116 PHE 117 THR 118 PRO 119 ALA 120 VAL 121 HIS 122 ALA 123 SER 124 LEU 125 ASP 126 LYS 127 PHE 128 LEU 129 ALA 130 SER 131 VAL 132 SER 133 THR 134 VAL 135 LEU 136 THR 137 SER 138 LYS 139 TYR 140 ARG 141
Unit 4	VAL 1 HIS 2 LEU 3 THR 4 PRO 5 GLU 6 GLU 7 LYS 8 SER 9 ALA 10 VAL 11 THR 12 ALA 13 LEU 14 TRP 15 GLY 16 LYS 17 VAL 18 ASN 19 VAL 20 ASP 21 GLU 22 VAL 23 GLY 24 GLY 25 GLU 26 ALA 27 LEU 28 GLY 29 ARG 30 LEU 31 LEU 32 VAL 33 VAL 34 TYR 35 PRO 36 TRP 37 THR 38 GLN 39 ARG 40 PHE 41 PHE 42 GLU 43 SER 44 PHE 45 GLY 46 ASP 47 LEU 48 SER 49 THR 50 PRO 51 ASP 52 ALA 53 VAL 54 MET 55 GLY 56 ASN 57 PRO 58 LYS 59 VAL 60 LYS 61 ALA 62 HIS 63 GLY 64 LYS 65 LYS 66 VAL 67 LEU 68 GLY 69 ALA 70 PHE 71 SER 72 ASP 73 GLY 74 LEU 75 ALA 76 HIS 77 LEU 78 ASP 79 ASN 80 LEU 81 LYS 82 GLY 83 THR 84 PHE 85 ALA 86 THR 87 LEU 88 SER 89 GLU 90 LEU 91 HIS 92 CYS 93 ASP 94 LYS 95 LEU 96 HIS 97 VAL 98 ASP 99 PRO 100 GLU 101 ASN 102 PHE 103 ARG 104 LEU 105 LEU 106 GLY 107 ASN 108 VAL 109 LEU 110 VAL 111 CYS 112 VAL 113 LEU 114 ALA 115 HIS 116 HIS 117 PHE 118 GLY 119 LYS 120 GLU 121 PHE 122 THR 123 PRO 124 PRO 125 VAL 126 GLN 127 ALA 128 ALA 129 TYR 130 GLN 131 LYS 132 VAL 133 VAL 134 ALA 135 GLY 136 VAL 137 ALA 138 ASN 139 ALA 140 LEU 141 ALA 142 HIS 143 LYS 144 TYR 145 HIS 146
Unit 5	VAL 1 LEU 2 SER 3 PRO 4 ALA 5 ASP 6 LYS 7 THR 8 ASN 9 VAL 10 LYS 11 ALA 12 ALA 13 TRP 14 GLY 15 LYS 16 VAL 17 GLY 18 ALA 19 HIS 20 ALA 21 GLY 22 GLU 23 TYR 24 GLY 25 ALA 26 GLU 27 ALA 28 LEU 29 GLU 30 ARG 31 MET 32 PHE 33 LEU 34 SER 35 PHE 36 PRO 37 THR 38 THR 39 LYS 40 THR 41 TYR 42 PHE 43 PRO 44 HIS 45 PHE 46 ASP 47 LEU 48 SER 49 HIS 50 GLY 51 SER 52 ALA 53 GLN 54 VAL 55 LYS 56 GLY 57 HIS 58 GLY 59 LYS 60 LYS 61 VAL 62 ALA 63 ASP 64 ALA 65 LEU 66 THR 67 ASN 68 ALA 69 VAL 70 ALA 71 HIS 72 VAL 73 ASP 74 ASP 75 MET 76 PRO 77 ASN 78 ALA 79 LEU 80 SER 81 ALA 82 LEU 83 SER 84 ASP 85 LEU 86 HIS 87 ALA 88 HIS 89 LYS 90 LEU 91 ARG 92 VAL 93 ASP 94 PRO 95 VAL 96 ASN 97 PHE 98 LYS 99 LEU 100 LEU 101 SER 102 HIS 103 CYS 104 LEU 105 LEU 106 VAL 107 THR 108 LEU 109 ALA 110 ALA 111 HIS 112 LEU 113 PRO 114 ALA 115 GLU 116 PHE 117 THR 118 PRO 119 ALA 120 VAL 121 HIS 122 ALA 123 SER 124 LEU 125 ASP 126 LYS 127 PHE 128 LEU 129 ALA 130 SER 131 VAL 132 SER 133 THR 134 VAL 135 LEU 136 THR 137 SER 138 LYS 139 TYR 140 ARG 141
Unit 6	GLU 6 GLU 7 LYS 8 SER 9 ALA 10 VAL 11 THR 12 ALA 13 LEU 14 TRP 15 GLY 16 LYS 17 VAL 18 ASN 19 VAL 20 ASP 21 GLU 22 VAL 23 GLY 24 GLY 25 GLU 26 ALA 27 LEU 28 GLY 29 ARG 30 LEU 31 LEU 32 VAL 33 VAL 34 TYR 35 PRO 36 TRP 37 THR 38 GLN 39 ARG 40 PHE 41 PHE 42 GLU 43 SER 44 PHE 45 GLY 46 ASP 47 LEU 48 SER 49 THR 50 PRO 51 ASP 52 ALA 53 VAL 54 MET 55 GLY 56 ASN 57 PRO 58 LYS 59 VAL 60 LYS 61 ALA 62 HIS 63 GLY 64 LYS 65 LYS 66 VAL 67 LEU 68 GLY 69 ALA 70 PHE 71 SER 72 ASP 73 GLY 74 LEU 75 ALA 76 HIS 77 LEU 78 ASP 79 ASN 80 LEU 81 LYS 82 GLY 83 THR 84 PHE 85 ALA 86 THR 87 LEU 88 SER 89 GLU 90 LEU 91 HIS 92 CYS 93 ASP 94 LYS 95 LEU 96 HIS 97 VAL 98 ASP 99 PRO 100 GLU 101 ASN 102 PHE 103 ARG 104 LEU 105 LEU 106 GLY 107 ASN 108 VAL 109 LEU 110 VAL 111 CYS 112 VAL 113 LEU 114 ALA 115 HIS 116 HIS 117 PHE 118 GLY 119 LYS 120 GLU 121 PHE 122 THR 123 PRO 124 PRO 125 VAL 126 GLN 127 ALA 128 ALA 129 TYR 130 GLN 131 LYS 132 VAL 133 VAL 134 ALA 135 GLY 136 VAL 137 ALA 138 ASN 139 ALA 140 LEU 141 ALA 142 HIS 143 LYS 144 TYR 145 HIS 146

Ligands

Unit 7	GOL 401
Unit 8	HEM 201 OXY 202
Unit 9	HEM 201 OXY 202 GOL 203
Unit 10	HEM 201 OXY 202
Unit 11	HEM 201 OXY 202