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Sequence, Chains, Asymmetric and Biological Units

Title HUMAN ADENOSINE DEAMINASE ACTING ON DSRNA (ADAR2) MUTANT E48 TO DSRNA SEQUENCE DERIVED FROM HUMAN GLI1 GENE
Keywords DEAMINASE, HUMAN, HYDROLASE-RNA COMPLEX
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5ED2     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   DOUBLE-STRANDED RNA-SPECIFIC EDITASE 1  A 385 3019 0
2  RNA    B 23 468 22
3  RNA    C 23 485 0
4  Protein   DOUBLE-STRANDED RNA-SPECIFIC EDITASE 1  D 385 3019 0
5  RNA    E 23 468 22
6  RNA    F 23 485 0
7  Ligand   DOUBLE-STRANDED RNA-SPECIFIC EDITASE 1  A 2 0 37
8  Ligand   DOUBLE-STRANDED RNA-SPECIFIC EDITASE 1  D 2 0 37
total       866 7944 118
Proteins
Unit 1 GLN316 LEU317 HIS318 LEU319 PRO320 GLN321 VAL322 LEU323 ALA324 ASP325 ALA326 VAL327 SER328 ARG329 LEU330 VAL331 LEU332 GLY333 LYS334 PHE335 GLY336 ASP337 LEU338 THR339 ASP340 ASN341 PHE342 SER343 SER344 PRO345 HIS346 ALA347 ARG348 ARG349 LYS350 VAL351 LEU352 ALA353 GLY354 VAL355 VAL356 MET357 THR358 THR359 GLY360 THR361 ASP362 VAL363 LYS364 ASP365 ALA366 LYS367 VAL368 ILE369 SER370 VAL371 SER372 THR373 GLY374 THR375 LYS376 CYS377 ILE378 ASN379 GLY380 GLU381 TYR382 MET383 SER384 ASP385 ARG386 GLY387 LEU388 ALA389 LEU390 ASN391 ASP392 CYS393 HIS394 ALA395 GLU396 ILE397 ILE398 SER399 ARG400 ARG401 SER402 LEU403 LEU404 ARG405 PHE406 LEU407 TYR408 THR409 GLN410 LEU411 GLU412 LEU413 TYR414 LEU415 ASN416 ASN417 LYS418 ASP419 ASP420 GLN421 LYS422 ARG423 SER424 ILE425 PHE426 GLN427 LYS428 SER429 GLU430 ARG431 GLY432 GLY433 PHE434 ARG435 LEU436 LYS437 GLU438 ASN439 VAL440 GLN441 PHE442 HIS443 LEU444 TYR445 ILE446 SER447 THR448 SER449 PRO450 CYS451 GLY452 ASP453 ALA454 ARG455 ILE456 PHE457 SER458 PRO459 HIS460 GLU461 PRO462 ILE463 LEU464 GLU465 GLU466 PRO467 ALA468 ASP469 ARG470 HIS471 PRO472 ASN473 ARG474 LYS475 ALA476 ARG477 GLY478 GLN479 LEU480 ARG481 THR482 LYS483 ILE484 GLU485 SER486 GLY487 GLN488 GLY489 THR490 ILE491 PRO492 VAL493 ARG494 SER495 ASN496 ALA497 SER498 ILE499 GLN500 THR501 TRP502 ASP503 GLY504 VAL505 LEU506 GLN507 GLY508 GLU509 ARG510 LEU511 LEU512 THR513 MET514 SER515 CYS516 SER517 ASP518 LYS519 ILE520 ALA521 ARG522 TRP523 ASN524 VAL525 VAL526 GLY527 ILE528 GLN529 GLY530 SER531 LEU532 LEU533 SER534 ILE535 PHE536 VAL537 GLU538 PRO539 ILE540 TYR541 PHE542 SER543 SER544 ILE545 ILE546 LEU547 GLY548 SER549 LEU550 TYR551 HIS552 GLY553 ASP554 HIS555 LEU556 SER557 ARG558 ALA559 MET560 TYR561 GLN562 ARG563 ILE564 SER565 ASN566 ILE567 GLU568 ASP569 LEU570 PRO571 PRO572 LEU573 TYR574 THR575 LEU576 ASN577 LYS578 PRO579 LEU580 LEU581 SER582 GLY583 ILE584 SER585 ASN586 ALA587 GLU588 ALA589 ARG590 GLN591 PRO592 GLY593 LYS594 ALA595 PRO596 ASN597 PHE598 SER599 VAL600 ASN601 TRP602 THR603 VAL604 GLY605 ASP606 SER607 ALA608 ILE609 GLU610 VAL611 ILE612 ASN613 ALA614 THR615 THR616 GLY617 LYS618 ASP619 GLU620 LEU621 GLY622 ARG623 ALA624 SER625 ARG626 LEU627 CYS628 LYS629 HIS630 ALA631 LEU632 TYR633 CYS634 ARG635 TRP636 MET637 ARG638 VAL639 HIS640 GLY641 LYS642 VAL643 PRO644 SER645 HIS646 LEU647 LEU648 ARG649 SER650 LYS651 ILE652 THR653 LYS654 PRO655 ASN656 VAL657 TYR658 HIS659 GLU660 SER661 LYS662 LEU663 ALA664 ALA665 LYS666 GLU667 TYR668 GLN669 ALA670 ALA671 LYS672 ALA673 ARG674 LEU675 PHE676 THR677 ALA678 PHE679 ILE680 LYS681 ALA682 GLY683 LEU684 GLY685 ALA686 TRP687 VAL688 GLU689 LYS690 PRO691 THR692 GLU693 GLN694 ASP695 GLN696 PHE697 SER698 LEU699 THR700
Unit 4 GLN316 LEU317 HIS318 LEU319 PRO320 GLN321 VAL322 LEU323 ALA324 ASP325 ALA326 VAL327 SER328 ARG329 LEU330 VAL331 LEU332 GLY333 LYS334 PHE335 GLY336 ASP337 LEU338 THR339 ASP340 ASN341 PHE342 SER343 SER344 PRO345 HIS346 ALA347 ARG348 ARG349 LYS350 VAL351 LEU352 ALA353 GLY354 VAL355 VAL356 MET357 THR358 THR359 GLY360 THR361 ASP362 VAL363 LYS364 ASP365 ALA366 LYS367 VAL368 ILE369 SER370 VAL371 SER372 THR373 GLY374 THR375 LYS376 CYS377 ILE378 ASN379 GLY380 GLU381 TYR382 MET383 SER384 ASP385 ARG386 GLY387 LEU388 ALA389 LEU390 ASN391 ASP392 CYS393 HIS394 ALA395 GLU396 ILE397 ILE398 SER399 ARG400 ARG401 SER402 LEU403 LEU404 ARG405 PHE406 LEU407 TYR408 THR409 GLN410 LEU411 GLU412 LEU413 TYR414 LEU415 ASN416 ASN417 LYS418 ASP419 ASP420 GLN421 LYS422 ARG423 SER424 ILE425 PHE426 GLN427 LYS428 SER429 GLU430 ARG431 GLY432 GLY433 PHE434 ARG435 LEU436 LYS437 GLU438 ASN439 VAL440 GLN441 PHE442 HIS443 LEU444 TYR445 ILE446 SER447 THR448 SER449 PRO450 CYS451 GLY452 ASP453 ALA454 ARG455 ILE456 PHE457 SER458 PRO459 HIS460 GLU461 PRO462 ILE463 LEU464 GLU465 GLU466 PRO467 ALA468 ASP469 ARG470 HIS471 PRO472 ASN473 ARG474 LYS475 ALA476 ARG477 GLY478 GLN479 LEU480 ARG481 THR482 LYS483 ILE484 GLU485 SER486 GLY487 GLN488 GLY489 THR490 ILE491 PRO492 VAL493 ARG494 SER495 ASN496 ALA497 SER498 ILE499 GLN500 THR501 TRP502 ASP503 GLY504 VAL505 LEU506 GLN507 GLY508 GLU509 ARG510 LEU511 LEU512 THR513 MET514 SER515 CYS516 SER517 ASP518 LYS519 ILE520 ALA521 ARG522 TRP523 ASN524 VAL525 VAL526 GLY527 ILE528 GLN529 GLY530 SER531 LEU532 LEU533 SER534 ILE535 PHE536 VAL537 GLU538 PRO539 ILE540 TYR541 PHE542 SER543 SER544 ILE545 ILE546 LEU547 GLY548 SER549 LEU550 TYR551 HIS552 GLY553 ASP554 HIS555 LEU556 SER557 ARG558 ALA559 MET560 TYR561 GLN562 ARG563 ILE564 SER565 ASN566 ILE567 GLU568 ASP569 LEU570 PRO571 PRO572 LEU573 TYR574 THR575 LEU576 ASN577 LYS578 PRO579 LEU580 LEU581 SER582 GLY583 ILE584 SER585 ASN586 ALA587 GLU588 ALA589 ARG590 GLN591 PRO592 GLY593 LYS594 ALA595 PRO596 ASN597 PHE598 SER599 VAL600 ASN601 TRP602 THR603 VAL604 GLY605 ASP606 SER607 ALA608 ILE609 GLU610 VAL611 ILE612 ASN613 ALA614 THR615 THR616 GLY617 LYS618 ASP619 GLU620 LEU621 GLY622 ARG623 ALA624 SER625 ARG626 LEU627 CYS628 LYS629 HIS630 ALA631 LEU632 TYR633 CYS634 ARG635 TRP636 MET637 ARG638 VAL639 HIS640 GLY641 LYS642 VAL643 PRO644 SER645 HIS646 LEU647 LEU648 ARG649 SER650 LYS651 ILE652 THR653 LYS654 PRO655 ASN656 VAL657 TYR658 HIS659 GLU660 SER661 LYS662 LEU663 ALA664 ALA665 LYS666 GLU667 TYR668 GLN669 ALA670 ALA671 LYS672 ALA673 ARG674 LEU675 PHE676 THR677 ALA678 PHE679 ILE680 LYS681 ALA682 GLY683 LEU684 GLY685 ALA686 TRP687 VAL688 GLU689 LYS690 PRO691 THR692 GLU693 GLN694 ASP695 GLN696 PHE697 SER698 LEU699 THR700
Nucleic acids
Unit 2 G1 C2 U3 C4 G5 C6 G7 A8 U9 G10 C11 U12 8AZ13 G14 A15 G16 G17 G18 C19 U20 C21 U22 G23
Unit 3 C1 A2 G3 A4 G5 C6 C7 C8 C9 C10 C11 A12 G13 C14 A15 U16 C17 G18 C19 G20 A21 G22 C23
Unit 5 G1 C2 U3 C4 G5 C6 G7 A8 U9 G10 C11 U12 8AZ13 G14 A15 G16 G17 G18 C19 U20 C21 U22 G23
Unit 6 C1 A2 G3 A4 G5 C6 C7 C8 C9 C10 C11 A12 G13 C14 A15 U16 C17 G18 C19 G20 A21 G22 C23
Ligands
Unit 7 IHP801 ZN802
Unit 8 IHP801 ZN802
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany