5E8M - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF HUMAN HEPARANASE
• Keywords: GLYCOSIDE HYDROLASE, APO, PROTEIN, SUGAR, HYDROLASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5E8M	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	HEPARANASE	A	385	3057	0
2	Protein	HEPARANASE	B	74	586	0
3	Ligand		C	2	0	24
4	Ligand	HEPARANASE	A	21	0	115
5	Ligand	HEPARANASE	B	1	0	4
6	Water			249	0	249
total				732	3643	392

Proteins

Unit 1

LYS 159 PHE 160 LYS 161 ASN 162 SER 163 THR 164 TYR 165 SER 166 ARG 167 SER 168 SER 169 VAL 170 ASP 171 VAL 172 LEU 173 TYR 174 THR 175 PHE 176 ALA 177 ASN 178 CYS 179 SER 180 GLY 181 LEU 182 ASP 183 LEU 184 ILE 185 PHE 186 GLY 187 LEU 188 ASN 189 ALA 190 LEU 191 LEU 192 ARG 193 THR 194 ALA 195 ASP 196 LEU 197 GLN 198 TRP 199 ASN 200 SER 201 SER 202 ASN 203 ALA 204 GLN 205 LEU 206 LEU 207 LEU 208 ASP 209 TYR 210 CYS 211 SER 212 SER 213 LYS 214 GLY 215 TYR 216 ASN 217 ILE 218 SER 219 TRP 220 GLU 221 LEU 222 GLY 223 ASN 224 GLU 225 PRO 226 ASN 227 SER 228 PHE 229 LEU 230 LYS 231 LYS 232 ALA 233 ASP 234 ILE 235 PHE 236 ILE 237 ASN 238 GLY 239 SER 240 GLN 241 LEU 242 GLY 243 GLU 244 ASP 245 PHE 246 ILE 247 GLN 248 LEU 249 HIS 250 LYS 251 LEU 252 LEU 253 ARG 254 LYS 255 SER 256 THR 257 PHE 258 LYS 259 ASN 260 ALA 261 LYS 262 LEU 263 TYR 264 GLY 265 PRO 266 ASP 267 VAL 268 GLY 269 GLN 270 PRO 271 ARG 272 ARG 273 LYS 274 THR 275 ALA 276 LYS 277 MET 278 LEU 279 LYS 280 SER 281 PHE 282 LEU 283 LYS 284 ALA 285 GLY 286 GLY 287 GLU 288 VAL 289 ILE 290 ASP 291 SER 292 VAL 293 THR 294 TRP 295 HIS 296 HIS 297 TYR 298 TYR 299 LEU 300 ASN 301 GLY 302 ARG 303 THR 304 ALA 305 THR 306 ARG 307 GLU 308 ASP 309 PHE 310 LEU 311 ASN 312 PRO 313 ASP 314 VAL 315 LEU 316 ASP 317 ILE 318 PHE 319 ILE 320 SER 321 SER 322 VAL 323 GLN 324 LYS 325 VAL 326 PHE 327 GLN 328 VAL 329 VAL 330 GLU 331 SER 332 THR 333 ARG 334 PRO 335 GLY 336 LYS 337 LYS 338 VAL 339 TRP 340 LEU 341 GLY 342 GLU 343 THR 344 SER 345 SER 346 ALA 347 TYR 348 GLY 349 GLY 350 GLY 351 ALA 352 PRO 353 LEU 354 LEU 355 SER 356 ASP 357 THR 358 PHE 359 ALA 360 ALA 361 GLY 362 PHE 363 MET 364 TRP 365 LEU 366 ASP 367 LYS 368 LEU 369 GLY 370 LEU 371 SER 372 ALA 373 ARG 374 MET 375 GLY 376 ILE 377 GLU 378 VAL 379 VAL 380 MET 381 ARG 382 GLN 383 VAL 384 PHE 385 PHE 386 GLY 387 ALA 388 GLY 389 ASN 390 TYR 391 HIS 392 LEU 393 VAL 394 ASP 395 GLU 396 ASN 397 PHE 398 ASP 399 PRO 400 LEU 401 PRO 402 ASP 403 TYR 404 TRP 405 LEU 406 SER 407 LEU 408 LEU 409 PHE 410 LYS 411 LYS 412 LEU 413 VAL 414 GLY 415 THR 416 LYS 417 VAL 418 LEU 419 MET 420 ALA 421 SER 422 VAL 423 GLN 424 GLY 425 SER 426 LYS 427 ARG 428 ARG 429 LYS 430 LEU 431 ARG 432 VAL 433 TYR 434 LEU 435 HIS 436 CYS 437 THR 438 ASN 439 THR 440 ASP 441 ASN 442 PRO 443 ARG 444 TYR 445 LYS 446 GLU 447 GLY 448 ASP 449 LEU 450 THR 451 LEU 452 TYR 453 ALA 454 ILE 455 ASN 456 LEU 457 HIS 458 ASN 459 VAL 460 THR 461 LYS 462 TYR 463 LEU 464 ARG 465 LEU 466 PRO 467 TYR 468 PRO 469 PHE 470 SER 471 ASN 472 LYS 473 GLN 474 VAL 475 ASP 476 LYS 477 TYR 478 LEU 479 LEU 480 ARG 481 PRO 482 LEU 483 GLY 484 PRO 485 HIS 486 GLY 487 LEU 488 LEU 489 SER 490 LYS 491 SER 492 VAL 493 GLN 494 LEU 495 ASN 496 GLY 497 LEU 498 THR 499 LEU 500 LYS 501 MET 502 VAL 503 ASP 504 ASP 505 GLN 506 THR 507 LEU 508 PRO 509 PRO 510 LEU 511 MET 512 GLU 513 LYS 514 PRO 515 LEU 516 ARG 517 PRO 518 GLY 519 SER 520 SER 521 LEU 522 GLY 523 LEU 524 PRO 525 ALA 526 PHE 527 SER 528 TYR 529 SER 530 PHE 531 PHE 532 VAL 533 ILE 534 ARG 535 ASN 536 ALA 537 LYS 538 VAL 539 ALA 540 ALA 541 CYS 542 ILE 543

Unit 2

GLN 1 ASP 2 VAL 3 VAL 4 ASP 5 LEU 6 ASP 7 PHE 8 PHE 9 THR 10 GLN 11 GLU 12 PRO 13 LEU 14 HIS 15 LEU 16 VAL 17 SER 18 PRO 19 SER 20 PHE 21 LEU 22 SER 23 VAL 24 THR 25 ILE 26 ASP 27 ALA 28 ASN 29 LEU 30 ALA 31 THR 32 ASP 33 PRO 34 ARG 35 PHE 36 LEU 37 ILE 38 LEU 39 LEU 40 GLY 41 SER 42 PRO 43 LYS 44 LEU 45 ARG 46 THR 47 LEU 48 ALA 49 ARG 50 GLY 51 LEU 52 SER 53 PRO 54 ALA 55 TYR 56 LEU 57 ARG 58 PHE 59 GLY 60 GLY 61 THR 62 LYS 63 THR 64 ASP 65 PHE 66 LEU 67 ILE 68 PHE 69 ASP 70 PRO 71 LYS 72 LYS 73 GLU 74

Ligands

Unit 3	NAG 1 FUC 2
Unit 4	NAG 601 NAG 602 NAG 603 NAG 604 EDO 607 EDO 608 EDO 609 EDO 610 EDO 611 EDO 612 EDO 613 EDO 614 EDO 615 EDO 616 EDO 617 EDO 618 EDO 619 EDO 620 CL 621 CL 622 CL 623
Unit 5	EDO 101