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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURES OF LEUKOCYTE INTEGRIN ALB2: THE AI DOMAIN, THE HE AND THE POCKET FOR THE INTERNAL LIGAND
Keywords LYMPHOCYTE FUNCTION-ASSOCIATED ANTIGEN-1, LFA-1, CELL ADHESI
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5E6U     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   INTEGRIN ALPHA-L  A 583 4474 0
2  Protein   INTEGRIN BETA-2  B 453 3513 0
3  Ligand   INTEGRIN ALPHA-L  A 5 0 18
4  Ligand   INTEGRIN BETA-2  B 5 0 31
5 Water     654 0 654
total       1700 7987 703

Proteins
Unit 1 TYR1 ASN2 LEU3 ASP4 VAL5 ARG6 GLY7 ALA8 ARG9 SER10 PHE11 SER12 PRO13 PRO14 ARG15 ALA16 GLY17 ARG18 HIS19 PHE20 GLY21 TYR22 ARG23 VAL24 LEU25 GLN26 VAL27 GLY28 ASN29 GLY30 VAL31 ILE32 VAL33 GLY34 ALA35 PRO36 GLY37 GLU38 GLY39 ASN40 SER41 THR42 GLY43 SER44 LEU45 TYR46 GLN47 CYS48 GLN49 SER50 GLY51 THR52 GLY53 HIS54 CYS55 LEU56 PRO57 VAL58 THR59 LEU60 ARG61 GLY62 SER63 ASN64 TYR65 THR66 SER67 LYS68 TYR69 LEU70 GLY71 MET72 THR73 LEU74 ALA75 THR76 ASP77 PRO78 THR79 ASP80 GLY81 SER82 ILE83 LEU84 ALA85 CYS86 ASP87 PRO88 GLY89 LEU90 SER91 ARG92 THR93 CYS94 ASP95 GLN96 ASN97 THR98 TYR99 LEU100 SER101 GLY102 LEU103 CYS104 TYR105 LEU106 PHE107 ARG108 GLN109 ASN110 LEU111 GLN112 GLY113 PRO114 MET115 LEU116 GLN117 GLY118 ARG119 PRO120 GLY121 PHE122 GLN123 GLU124 CYS125 ILE126 LYS127 GLY128 ASN129 VAL130 ASP131 LEU132 VAL133 PHE134 LEU135 PHE136 ASP137 GLY138 SER139 MET140 SER141 LEU142 GLN143 PRO144 ASP145 GLU146 PHE147 GLN148 LYS149 ILE150 LEU151 ASP152 PHE153 MET154 LYS155 ASP156 VAL157 MET158 LYS159 LYS160 LEU161 SER162 ASN163 THR164 SER165 TYR166 GLN167 PHE168 ALA169 ALA170 VAL171 GLN172 PHE173 SER174 THR175 SER176 TYR177 LYS178 THR179 GLU180 PHE181 ASP182 PHE183 SER184 ASP185 TYR186 VAL187 LYS188 TRP189 LYS190 ASP191 PRO192 ASP193 ALA194 LEU195 LEU196 LYS197 HIS198 VAL199 LYS200 HIS201 MET202 LEU203 LEU204 LEU205 THR206 ASN207 THR208 PHE209 GLY210 ALA211 ILE212 ASN213 TYR214 VAL215 ALA216 THR217 GLU218 VAL219 PHE220 ARG221 GLU222 GLU223 LEU224 GLY225 ALA226 ARG227 PRO228 ASP229 ALA230 THR231 LYS232 VAL233 LEU234 ILE235 ILE236 ILE237 THR238 ASP239 GLY240 GLU241 ALA242 THR243 ASP244 SER245 GLY246 ASN247 ILE248 ASP249 ALA250 ALA251 LYS252 ASP253 ILE254 ILE255 ARG256 TYR257 ILE258 ILE259 GLY260 ILE261 GLY262 LYS263 HIS264 PHE265 GLN266 THR267 LYS268 GLU269 SER270 GLN271 GLU272 THR273 LEU274 HIS275 LYS276 PHE277 ALA278 SER279 LYS280 PRO281 ALA282 SER283 GLU284 PHE285 VAL286 LYS287 ILE288 LEU289 ASP290 THR291 PHE292 GLU293 LYS294 LEU295 LYS296 ASP297 LEU298 PHE299 THR300 GLU301 LEU302 GLN303 LYS304 LYS305 ILE306 GLN315 ASP316 LEU317 THR318 SER319 PHE320 ASN321 MET322 GLU323 LEU324 SER325 SER326 SER327 GLY328 ILE329 SER330 ALA331 ASP332 LEU333 SER334 ARG335 GLY336 HIS337 ALA338 VAL339 VAL340 GLY341 ALA342 VAL343 GLY344 ALA345 LYS346 ASP347 TRP348 ALA349 GLY350 GLY351 PHE352 LEU353 ASP354 LEU355 LYS356 ALA357 ASP358 LEU359 GLN360 ASP361 ASP362 THR363 PHE364 ILE365 GLY366 ASN367 GLU368 PRO369 LEU370 THR371 PRO372 GLU373 VAL374 ARG375 ALA376 GLY377 TYR378 LEU379 GLY380 TYR381 THR382 VAL383 THR384 TRP385 LEU386 PRO387 SER388 ARG389 GLN390 LYS391 THR392 SER393 LEU394 LEU395 ALA396 SER397 GLY398 ALA399 PRO400 ARG401 TYR402 GLN403 HIS404 MET405 GLY406 ARG407 VAL408 LEU409 LEU410 PHE411 GLN412 GLU413 PRO414 GLN415 GLY416 GLY417 GLY418 HIS419 TRP420 SER421 GLN422 VAL423 GLN424 THR425 ILE426 HIS427 GLY428 THR429 GLN430 ILE431 GLY432 SER433 TYR434 PHE435 GLY436 GLY437 GLU438 LEU439 CYS440 GLY441 VAL442 ASP443 VAL444 ASP445 GLN446 ASP447 GLY448 GLU449 THR450 GLU451 LEU452 LEU453 LEU454 ILE455 GLY456 ALA457 PRO458 LEU459 PHE460 TYR461 GLY462 GLU463 GLN464 ARG465 GLY466 GLY467 ARG468 VAL469 PHE470 ILE471 TYR472 GLN473 ARG474 ARG475 GLN476 LEU477 GLY478 PHE479 GLU480 GLU481 VAL482 SER483 GLU484 LEU485 GLN486 GLY487 ASP488 PRO489 GLY490 TYR491 PRO492 LEU493 GLY494 ARG495 PHE496 GLY497 GLU498 ALA499 ILE500 THR501 ALA502 LEU503 THR504 ASP505 ILE506 ASN507 GLY508 ASP509 GLY510 LEU511 VAL512 ASP513 VAL514 ALA515 VAL516 GLY517 ALA518 PRO519 LEU520 GLU521 GLU522 GLN523 GLY524 ALA525 VAL526 TYR527 ILE528 PHE529 ASN530 GLY531 ARG532 HIS533 GLY534 GLY535 LEU536 SER537 PRO538 GLN539 PRO540 SER541 GLN542 ARG543 ILE544 GLU545 GLY546 THR547 GLN548 VAL549 LEU550 SER551 GLY552 ILE553 GLN554 TRP555 PHE556 GLY557 ARG558 SER559 ILE560 HIS561 GLY562 VAL563 LYS564 ASP565 LEU566 GLU567 GLY568 ASP569 GLY570 LEU571 ALA572 ASP573 VAL574 ALA575 VAL576 GLY577 ALA578 GLU579 SER580 GLN581 MET582 ILE583 VAL584 LEU585 SER586 SER587 ARG588 PRO589 VAL590 VAL591
Unit 2 GLN1 GLU2 CYS3 THR4 LYS5 PHE6 LYS7 VAL8 SER9 SER10 CYS11 ARG12 GLU13 CYS14 ILE15 GLU16 SER17 GLY18 PRO19 GLY20 CYS21 THR22 TRP23 CYS24 GLN25 LYS26 LEU27 ASN28 PHE29 THR30 GLY31 PRO32 GLY33 ASP34 PRO35 ASP36 SER37 ILE38 ARG39 CYS40 ASP41 THR42 ARG43 PRO44 GLN45 LEU46 LEU47 MET48 ARG49 GLY50 CYS51 ALA52 ALA53 ASP54 ASP55 ILE56 MET57 ASP58 PRO59 THR60 SER61 LEU62 ALA63 GLU64 THR65 GLN66 GLN73 LYS74 GLN75 LEU76 SER77 PRO78 GLN79 LYS80 VAL81 THR82 LEU83 TYR84 LEU85 ARG86 PRO87 GLY88 GLN89 ALA90 ALA91 ALA92 PHE93 ASN94 VAL95 THR96 PHE97 ARG98 ARG99 ALA100 LYS101 GLY102 TYR103 PRO104 ILE105 ASP106 LEU107 TYR108 TYR109 LEU110 MET111 ASP112 LEU113 SER114 TYR115 SER116 MET117 LEU118 ASP119 ASP120 LEU121 ARG122 ASN123 VAL124 LYS125 LYS126 LEU127 GLY128 GLY129 ASP130 LEU131 LEU132 ARG133 ALA134 LEU135 ASN136 GLU137 ILE138 THR139 GLU140 SER141 GLY142 ARG143 ILE144 GLY145 PHE146 GLY147 SER148 PHE149 VAL150 ASP151 LYS152 THR153 VAL154 LEU155 PRO156 PHE157 VAL158 ASN159 THR160 HIS161 PRO162 ASP163 LYS164 LEU165 ARG166 ASN167 PRO168 CYS169 PRO170 ASN171 LYS172 GLU173 LYS174 GLU175 CYS176 GLN177 PRO178 PRO179 PHE180 ALA181 PHE182 ARG183 HIS184 VAL185 LEU186 LYS187 LEU188 THR189 ASN190 ASN191 SER192 ASN193 GLN194 PHE195 GLN196 THR197 GLU198 VAL199 GLY200 LYS201 GLN202 LEU203 ILE204 SER205 GLY206 ASN207 LEU208 ASP209 ALA210 PRO211 GLU212 GLY213 GLY214 LEU215 ASP216 ALA217 MET218 MET219 GLN220 VAL221 ALA222 ALA223 CYS224 PRO225 GLU226 GLU227 ILE228 GLY229 TRP230 ARG231 LYS232 VAL233 THR234 ARG235 LEU236 LEU237 VAL238 PHE239 ALA240 THR241 ASP242 ASP243 GLY244 PHE245 HIS246 PHE247 ALA248 GLY249 ASP250 GLY251 LYS252 LEU253 GLY254 ALA255 ILE256 LEU257 THR258 PRO259 ASN260 ASP261 GLY262 ARG263 CYS264 HIS265 LEU266 GLU267 ASP268 ASN269 LEU270 TYR271 LYS272 ARG273 SER274 ASN275 GLU276 PHE277 ASP278 TYR279 PRO280 SER281 VAL282 GLY283 GLN284 LEU285 ALA286 HIS287 LYS288 LEU289 ALA290 GLU291 ASN292 ASN293 ILE294 GLN295 PRO296 ILE297 PHE298 ALA299 VAL300 THR301 SER302 ARG303 MET304 VAL305 LYS306 THR307 TYR308 GLU309 LYS310 LEU311 THR312 GLU313 ILE314 ILE315 PRO316 LYS317 SER318 ALA319 VAL320 GLY321 GLU322 LEU323 SER324 GLU325 ASP326 SER327 SER328 ASN329 VAL330 VAL331 GLN332 LEU333 ILE334 LYS335 ASN336 ALA337 TYR338 ASN339 LYS340 LEU341 SER342 SER343 ARG344 VAL345 PHE346 LEU347 ASP348 HIS349 ASN350 ALA351 LEU352 PRO353 ASP354 THR355 LEU356 LYS357 VAL358 THR359 TYR360 ASP361 SER362 PHE363 CYS364 SER365 ASN366 GLY367 VAL368 THR369 HIS370 ARG371 ASN372 GLN373 PRO374 ARG375 GLY376 ASP377 CYS378 ASP379 GLY380 VAL381 GLN382 ILE383 ASN384 VAL385 PRO386 ILE387 THR388 PHE389 GLN390 VAL391 LYS392 VAL393 THR394 ALA395 THR396 GLU397 CYS398 ILE399 GLN400 GLU401 GLN402 SER403 PHE404 VAL405 ILE406 ARG407 ALA408 LEU409 GLY410 PHE411 THR412 ASP413 ILE414 VAL415 THR416 VAL417 GLN418 VAL419 LEU420 PRO421 GLN422 CYS423 GLU424 CYS425 ARG426 CYS427 ARG428 ASP429 GLN430 SER431 ARG432 ASP433 ARG434 SER435 LEU436 CYS437 HIS438 GLY439 LYS440 GLY441 PHE442 LEU443 GLU444 CYS445 GLY446 ILE447 CYS448 ARG449 CYS450 ASP451 THR452 GLY453 TYR454 ILE455 GLY456 LYS457 ASN458 CYS459

Ligands
Unit 3 MG2001 CA2002 CA2003 CL2004 NAG3064
Unit 4 MG2001 CA2002 CA2003 NAG3094 NAG3190

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany