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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF D-ALANINE CARBOXYPEPTIDASE AMPC FROM MYCOBACTERIUM SMEGMATIS
Keywords STRUCTURAL GENOMICS, PSI-BIOLOGY, MIDWEST CENTER FOR STRUCTU GENOMICS, MCSG, HYDROLASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5E2H     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   BETA-LACTAMASE  A 354 2614 72
2  Protein   BETA-LACTAMASE  B 354 2614 72
3  Protein   BETA-LACTAMASE  C 354 2614 72
4  Ligand   BETA-LACTAMASE  A 2 0 2
5  Ligand   BETA-LACTAMASE  B 2 0 2
6  Ligand   BETA-LACTAMASE  C 3 0 8
7 Water     803 0 803
total       1872 7842 1031

Proteins
Unit 1 ALA0 ASP1 PRO2 SER3 ALA4 ALA5 VAL6 ALA7 ARG8 ALA9 PHE10 ALA11 PRO12 LEU13 LEU14 ASP15 GLN16 TYR17 ASP18 VAL19 PRO20 GLY21 MSE22 ALA23 VAL24 ALA25 VAL26 THR27 VAL28 ASP29 GLY30 ARG31 GLN32 HIS33 PHE34 TYR35 GLU36 PHE37 GLY38 VAL39 VAL40 SER41 LYS42 GLN43 THR44 GLN45 ALA46 PRO47 VAL48 THR49 ARG50 ASP51 THR52 LEU53 PHE54 GLU55 ILE56 GLY57 SER58 VAL59 SER60 LYS61 THR62 PHE63 THR64 ALA65 THR66 LEU67 ALA68 GLY69 TYR70 ALA71 ALA72 THR73 ARG74 GLY75 VAL76 LEU77 ASN78 LEU79 ASP80 ASP81 HIS82 PRO83 GLY84 ARG85 TYR86 LEU87 PRO88 ALA89 LEU90 ALA91 GLY92 THR93 PRO94 ILE95 ASP96 ARG97 ALA98 GLU99 LEU100 ARG101 ASN102 LEU103 GLY104 THR105 TYR106 THR107 ALA108 GLY109 GLY110 LEU111 PRO112 LEU113 GLN114 PHE115 PRO116 GLU117 SER118 VAL119 THR120 ASP121 ASP122 GLU123 GLN124 MSE125 ILE126 ALA127 TYR128 PHE129 GLN130 GLN131 PHE132 GLN133 PRO134 VAL135 THR136 ALA137 PRO138 GLY139 LYS140 ILE141 ARG142 GLN143 TYR144 SER145 ASN146 PRO147 SER148 VAL149 GLY150 LEU151 LEU152 GLY153 HIS154 ILE155 SER156 ALA157 ARG158 ALA159 LEU160 GLY161 GLY162 GLN163 PHE164 THR165 ASP166 LEU167 MSE168 GLN169 SER170 GLN171 ILE172 LEU173 THR174 GLY175 LEU176 GLY177 LEU178 ARG179 ARG180 SER181 PHE182 VAL183 ASP184 VAL185 THR186 ASP187 GLU188 ALA189 MSE190 ASP191 PHE192 TYR193 ALA194 TRP195 GLY196 TYR197 ASP198 LYS199 LYS200 ASN201 HIS202 PRO203 VAL204 ARG205 VAL206 ASN207 PRO208 GLY209 VAL210 PHE211 ASP212 ALA213 GLU214 ALA215 TYR216 GLY217 VAL218 LYS219 SER220 THR221 THR222 ALA223 ASP224 MSE225 ILE226 ARG227 PHE228 ILE229 GLU230 HIS231 ASN232 ILE233 ASP234 PRO235 GLY236 ALA237 LEU238 GLU239 PRO240 THR241 LEU242 ARG243 GLU244 ALA245 VAL246 LYS247 SER248 THR249 GLN250 VAL251 GLY252 TYR253 TYR254 LYS255 VAL256 GLY257 PRO258 MSE259 VAL260 GLN261 ASP262 LEU263 GLY264 TRP265 GLU266 GLN267 TYR268 PRO269 TYR270 PRO271 VAL272 ALA273 LEU274 ASP275 GLN276 LEU277 LEU278 ALA279 GLY280 ASN281 SER282 GLY283 GLU284 MSE285 ALA286 MSE287 SER288 PRO289 GLN290 ALA291 ALA292 THR293 ALA294 ILE295 ALA296 PRO297 PRO298 SER299 VAL300 GLY301 SER302 ALA303 LEU304 PHE305 ASN306 LYS307 THR308 GLY309 SER310 THR311 ASP312 GLY313 PHE314 GLY315 ALA316 TYR317 ALA318 ALA319 PHE320 VAL321 PRO322 GLU323 ARG324 ARG325 ILE326 GLY327 ILE328 VAL329 MSE330 LEU331 ALA332 ASN333 LYS334 ASN335 PHE336 PRO337 ILE338 PRO339 ALA340 ARG341 VAL342 THR343 ALA344 ALA345 HIS346 THR347 VAL348 LEU349 ASP350 ALA351 LEU352 ASP353
Unit 2 ALA0 ASP1 PRO2 SER3 ALA4 ALA5 VAL6 ALA7 ARG8 ALA9 PHE10 ALA11 PRO12 LEU13 LEU14 ASP15 GLN16 TYR17 ASP18 VAL19 PRO20 GLY21 MSE22 ALA23 VAL24 ALA25 VAL26 THR27 VAL28 ASP29 GLY30 ARG31 GLN32 HIS33 PHE34 TYR35 GLU36 PHE37 GLY38 VAL39 VAL40 SER41 LYS42 GLN43 THR44 GLN45 ALA46 PRO47 VAL48 THR49 ARG50 ASP51 THR52 LEU53 PHE54 GLU55 ILE56 GLY57 SER58 VAL59 SER60 LYS61 THR62 PHE63 THR64 ALA65 THR66 LEU67 ALA68 GLY69 TYR70 ALA71 ALA72 THR73 ARG74 GLY75 VAL76 LEU77 ASN78 LEU79 ASP80 ASP81 HIS82 PRO83 GLY84 ARG85 TYR86 LEU87 PRO88 ALA89 LEU90 ALA91 GLY92 THR93 PRO94 ILE95 ASP96 ARG97 ALA98 GLU99 LEU100 ARG101 ASN102 LEU103 GLY104 THR105 TYR106 THR107 ALA108 GLY109 GLY110 LEU111 PRO112 LEU113 GLN114 PHE115 PRO116 GLU117 SER118 VAL119 THR120 ASP121 ASP122 GLU123 GLN124 MSE125 ILE126 ALA127 TYR128 PHE129 GLN130 GLN131 PHE132 GLN133 PRO134 VAL135 THR136 ALA137 PRO138 GLY139 LYS140 ILE141 ARG142 GLN143 TYR144 SER145 ASN146 PRO147 SER148 VAL149 GLY150 LEU151 LEU152 GLY153 HIS154 ILE155 SER156 ALA157 ARG158 ALA159 LEU160 GLY161 GLY162 GLN163 PHE164 THR165 ASP166 LEU167 MSE168 GLN169 SER170 GLN171 ILE172 LEU173 THR174 GLY175 LEU176 GLY177 LEU178 ARG179 ARG180 SER181 PHE182 VAL183 ASP184 VAL185 THR186 ASP187 GLU188 ALA189 MSE190 ASP191 PHE192 TYR193 ALA194 TRP195 GLY196 TYR197 ASP198 LYS199 LYS200 ASN201 HIS202 PRO203 VAL204 ARG205 VAL206 ASN207 PRO208 GLY209 VAL210 PHE211 ASP212 ALA213 GLU214 ALA215 TYR216 GLY217 VAL218 LYS219 SER220 THR221 THR222 ALA223 ASP224 MSE225 ILE226 ARG227 PHE228 ILE229 GLU230 HIS231 ASN232 ILE233 ASP234 PRO235 GLY236 ALA237 LEU238 GLU239 PRO240 THR241 LEU242 ARG243 GLU244 ALA245 VAL246 LYS247 SER248 THR249 GLN250 VAL251 GLY252 TYR253 TYR254 LYS255 VAL256 GLY257 PRO258 MSE259 VAL260 GLN261 ASP262 LEU263 GLY264 TRP265 GLU266 GLN267 TYR268 PRO269 TYR270 PRO271 VAL272 ALA273 LEU274 ASP275 GLN276 LEU277 LEU278 ALA279 GLY280 ASN281 SER282 GLY283 GLU284 MSE285 ALA286 MSE287 SER288 PRO289 GLN290 ALA291 ALA292 THR293 ALA294 ILE295 ALA296 PRO297 PRO298 SER299 VAL300 GLY301 SER302 ALA303 LEU304 PHE305 ASN306 LYS307 THR308 GLY309 SER310 THR311 ASP312 GLY313 PHE314 GLY315 ALA316 TYR317 ALA318 ALA319 PHE320 VAL321 PRO322 GLU323 ARG324 ARG325 ILE326 GLY327 ILE328 VAL329 MSE330 LEU331 ALA332 ASN333 LYS334 ASN335 PHE336 PRO337 ILE338 PRO339 ALA340 ARG341 VAL342 THR343 ALA344 ALA345 HIS346 THR347 VAL348 LEU349 ASP350 ALA351 LEU352 ASP353
Unit 3 ALA0 ASP1 PRO2 SER3 ALA4 ALA5 VAL6 ALA7 ARG8 ALA9 PHE10 ALA11 PRO12 LEU13 LEU14 ASP15 GLN16 TYR17 ASP18 VAL19 PRO20 GLY21 MSE22 ALA23 VAL24 ALA25 VAL26 THR27 VAL28 ASP29 GLY30 ARG31 GLN32 HIS33 PHE34 TYR35 GLU36 PHE37 GLY38 VAL39 VAL40 SER41 LYS42 GLN43 THR44 GLN45 ALA46 PRO47 VAL48 THR49 ARG50 ASP51 THR52 LEU53 PHE54 GLU55 ILE56 GLY57 SER58 VAL59 SER60 LYS61 THR62 PHE63 THR64 ALA65 THR66 LEU67 ALA68 GLY69 TYR70 ALA71 ALA72 THR73 ARG74 GLY75 VAL76 LEU77 ASN78 LEU79 ASP80 ASP81 HIS82 PRO83 GLY84 ARG85 TYR86 LEU87 PRO88 ALA89 LEU90 ALA91 GLY92 THR93 PRO94 ILE95 ASP96 ARG97 ALA98 GLU99 LEU100 ARG101 ASN102 LEU103 GLY104 THR105 TYR106 THR107 ALA108 GLY109 GLY110 LEU111 PRO112 LEU113 GLN114 PHE115 PRO116 GLU117 SER118 VAL119 THR120 ASP121 ASP122 GLU123 GLN124 MSE125 ILE126 ALA127 TYR128 PHE129 GLN130 GLN131 PHE132 GLN133 PRO134 VAL135 THR136 ALA137 PRO138 GLY139 LYS140 ILE141 ARG142 GLN143 TYR144 SER145 ASN146 PRO147 SER148 VAL149 GLY150 LEU151 LEU152 GLY153 HIS154 ILE155 SER156 ALA157 ARG158 ALA159 LEU160 GLY161 GLY162 GLN163 PHE164 THR165 ASP166 LEU167 MSE168 GLN169 SER170 GLN171 ILE172 LEU173 THR174 GLY175 LEU176 GLY177 LEU178 ARG179 ARG180 SER181 PHE182 VAL183 ASP184 VAL185 THR186 ASP187 GLU188 ALA189 MSE190 ASP191 PHE192 TYR193 ALA194 TRP195 GLY196 TYR197 ASP198 LYS199 LYS200 ASN201 HIS202 PRO203 VAL204 ARG205 VAL206 ASN207 PRO208 GLY209 VAL210 PHE211 ASP212 ALA213 GLU214 ALA215 TYR216 GLY217 VAL218 LYS219 SER220 THR221 THR222 ALA223 ASP224 MSE225 ILE226 ARG227 PHE228 ILE229 GLU230 HIS231 ASN232 ILE233 ASP234 PRO235 GLY236 ALA237 LEU238 GLU239 PRO240 THR241 LEU242 ARG243 GLU244 ALA245 VAL246 LYS247 SER248 THR249 GLN250 VAL251 GLY252 TYR253 TYR254 LYS255 VAL256 GLY257 PRO258 MSE259 VAL260 GLN261 ASP262 LEU263 GLY264 TRP265 GLU266 GLN267 TYR268 PRO269 TYR270 PRO271 VAL272 ALA273 LEU274 ASP275 GLN276 LEU277 LEU278 ALA279 GLY280 ASN281 SER282 GLY283 GLU284 MSE285 ALA286 MSE287 SER288 PRO289 GLN290 ALA291 ALA292 THR293 ALA294 ILE295 ALA296 PRO297 PRO298 SER299 VAL300 GLY301 SER302 ALA303 LEU304 PHE305 ASN306 LYS307 THR308 GLY309 SER310 THR311 ASP312 GLY313 PHE314 GLY315 ALA316 TYR317 ALA318 ALA319 PHE320 VAL321 PRO322 GLU323 ARG324 ARG325 ILE326 GLY327 ILE328 VAL329 MSE330 LEU331 ALA332 ASN333 LYS334 ASN335 PHE336 PRO337 ILE338 PRO339 ALA340 ARG341 VAL342 THR343 ALA344 ALA345 HIS346 THR347 VAL348 LEU349 ASP350 ALA351 LEU352 ASP353

Ligands
Unit 4 CL401 CL402
Unit 5 CL401 CL402
Unit 6 CL401 CL402 GOL403

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany