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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE HBV CAPSID Y132A MUTANT (VCID 8772) COMPLEX WITH NVR10-001E2 AT 1.95A RESOLUTION
Keywords NVR10-001E2, VIRAL PROTEIN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5E0I     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   CAPSID PROTEIN  A 154 1204 0
2  Protein   CAPSID PROTEIN  B 154 1200 0
3  Protein   CAPSID PROTEIN  C 146 1139 0
4  Protein   CAPSID PROTEIN  D 145 1132 0
5  Protein   CAPSID PROTEIN  E 144 1115 0
6  Protein   CAPSID PROTEIN  F 137 1074 0
7  Ligand   CAPSID PROTEIN  A 1 0 30
8  Ligand   CAPSID PROTEIN  B 1 0 30
9  Ligand   CAPSID PROTEIN  C 1 0 30
10  Ligand   CAPSID PROTEIN  D 1 0 30
11  Ligand   CAPSID PROTEIN  E 1 0 30
12  Ligand   CAPSID PROTEIN  F 1 0 30
13 Water     440 0 440
total       1326 6864 620

Proteins
Unit 1 SER0 MET1 ASP2 ILE3 ASP4 PRO5 TYR6 LYS7 GLU8 PHE9 GLY10 ALA11 THR12 VAL13 GLU14 LEU15 LEU16 SER17 PHE18 LEU19 PRO20 SER21 ASP22 PHE23 PHE24 PRO25 SER26 VAL27 ARG28 ASP29 LEU30 LEU31 ASP32 THR33 ALA34 ALA35 ALA36 LEU37 TYR38 ARG39 ASP40 ALA41 LEU42 GLU43 SER44 PRO45 GLU46 HIS47 CYS48 SER49 PRO50 HIS51 HIS52 THR53 ALA54 LEU55 ARG56 GLN57 ALA58 ILE59 LEU60 CYS61 TRP62 GLY63 ASP64 LEU65 MET66 THR67 LEU68 ALA69 THR70 TRP71 VAL72 GLY73 THR74 ASN75 LEU76 GLU77 ASP78 PRO79 ALA80 SER81 ARG82 ASP83 LEU84 VAL85 VAL86 SER87 TYR88 VAL89 ASN90 THR91 ASN92 VAL93 GLY94 LEU95 LYS96 PHE97 ARG98 GLN99 LEU100 LEU101 TRP102 PHE103 HIS104 ILE105 SER106 CYS107 LEU108 THR109 PHE110 GLY111 ARG112 GLU113 THR114 VAL115 LEU116 GLU117 TYR118 LEU119 VAL120 SER121 PHE122 GLY123 VAL124 TRP125 ILE126 ARG127 THR128 PRO129 PRO130 ALA131 ALA132 ARG133 PRO134 PRO135 ASN136 ALA137 PRO138 ILE139 LEU140 SER141 THR142 LEU143 PRO144 GLU145 THR146 THR147 VAL148 GLU152 ASN153 LEU154 TYR155 PHE156
Unit 2 SER0 MET1 ASP2 ILE3 ASP4 PRO5 TYR6 LYS7 GLU8 PHE9 GLY10 ALA11 THR12 VAL13 GLU14 LEU15 LEU16 SER17 PHE18 LEU19 PRO20 SER21 ASP22 PHE23 PHE24 PRO25 SER26 VAL27 ARG28 ASP29 LEU30 LEU31 ASP32 THR33 ALA34 ALA35 ALA36 LEU37 TYR38 ARG39 ASP40 ALA41 LEU42 GLU43 SER44 PRO45 GLU46 HIS47 CYS48 SER49 PRO50 HIS51 HIS52 THR53 ALA54 LEU55 ARG56 GLN57 ALA58 ILE59 LEU60 CYS61 TRP62 GLY63 ASP64 LEU65 MET66 THR67 LEU68 ALA69 THR70 TRP71 VAL72 GLY73 THR74 ASN75 LEU76 GLU77 ASP78 PRO79 ALA80 SER81 ARG82 ASP83 LEU84 VAL85 VAL86 SER87 TYR88 VAL89 ASN90 THR91 ASN92 VAL93 GLY94 LEU95 LYS96 PHE97 ARG98 GLN99 LEU100 LEU101 TRP102 PHE103 HIS104 ILE105 SER106 CYS107 LEU108 THR109 PHE110 GLY111 ARG112 GLU113 THR114 VAL115 LEU116 GLU117 TYR118 LEU119 VAL120 SER121 PHE122 GLY123 VAL124 TRP125 ILE126 ARG127 THR128 PRO129 PRO130 ALA131 ALA132 ARG133 PRO134 PRO135 ASN136 ALA137 PRO138 ILE139 LEU140 SER141 THR142 LEU143 PRO144 GLU145 THR146 THR147 VAL148 GLU152 ASN153 LEU154 TYR155 PHE156
Unit 3 SER0 MET1 ASP2 ILE3 ASP4 PRO5 TYR6 LYS7 GLU8 PHE9 GLY10 ALA11 THR12 VAL13 GLU14 LEU15 LEU16 SER17 PHE18 LEU19 PRO20 SER21 ASP22 PHE23 PHE24 PRO25 SER26 VAL27 ARG28 ASP29 LEU30 LEU31 ASP32 THR33 ALA34 ALA35 ALA36 LEU37 TYR38 ARG39 ASP40 ALA41 LEU42 GLU43 SER44 PRO45 GLU46 HIS47 CYS48 SER49 PRO50 HIS51 HIS52 THR53 ALA54 LEU55 ARG56 GLN57 ALA58 ILE59 LEU60 CYS61 TRP62 GLY63 ASP64 LEU65 MET66 THR67 LEU68 ALA69 THR70 TRP71 VAL72 GLY73 THR74 ASP83 LEU84 VAL85 VAL86 SER87 TYR88 VAL89 ASN90 THR91 ASN92 VAL93 GLY94 LEU95 LYS96 PHE97 ARG98 GLN99 LEU100 LEU101 TRP102 PHE103 HIS104 ILE105 SER106 CYS107 LEU108 THR109 PHE110 GLY111 ARG112 GLU113 THR114 VAL115 LEU116 GLU117 TYR118 LEU119 VAL120 SER121 PHE122 GLY123 VAL124 TRP125 ILE126 ARG127 THR128 PRO129 PRO130 ALA131 ALA132 ARG133 PRO134 PRO135 ASN136 ALA137 PRO138 ILE139 LEU140 SER141 THR142 LEU143 PRO144 GLU145 THR146 THR147 VAL148 GLU152 ASN153 LEU154 TYR155 PHE156
Unit 4 MET1 ASP2 ILE3 ASP4 PRO5 TYR6 LYS7 GLU8 PHE9 GLY10 ALA11 THR12 VAL13 GLU14 LEU15 LEU16 SER17 PHE18 LEU19 PRO20 SER21 ASP22 PHE23 PHE24 PRO25 SER26 VAL27 ARG28 ASP29 LEU30 LEU31 ASP32 THR33 ALA34 ALA35 ALA36 LEU37 TYR38 ARG39 ASP40 ALA41 LEU42 GLU43 SER44 PRO45 GLU46 HIS47 CYS48 SER49 PRO50 HIS51 HIS52 THR53 ALA54 LEU55 ARG56 GLN57 ALA58 ILE59 LEU60 CYS61 TRP62 GLY63 ASP64 LEU65 MET66 THR67 LEU68 ALA69 THR70 TRP71 VAL72 SER81 ARG82 ASP83 LEU84 VAL85 VAL86 SER87 TYR88 VAL89 ASN90 THR91 ASN92 VAL93 GLY94 LEU95 LYS96 PHE97 ARG98 GLN99 LEU100 LEU101 TRP102 PHE103 HIS104 ILE105 SER106 CYS107 LEU108 THR109 PHE110 GLY111 ARG112 GLU113 THR114 VAL115 LEU116 GLU117 TYR118 LEU119 VAL120 SER121 PHE122 GLY123 VAL124 TRP125 ILE126 ARG127 THR128 PRO129 PRO130 ALA131 ALA132 ARG133 PRO134 PRO135 ASN136 ALA137 PRO138 ILE139 LEU140 SER141 THR142 LEU143 PRO144 GLU145 THR146 THR147 VAL148 GLU152 ASN153 LEU154 TYR155 PHE156
Unit 5 SER0 MET1 ASP2 ILE3 ASP4 PRO5 TYR6 LYS7 GLU8 PHE9 GLY10 ALA11 THR12 VAL13 GLU14 LEU15 LEU16 SER17 PHE18 LEU19 PRO20 SER21 ASP22 PHE23 PHE24 PRO25 SER26 VAL27 ARG28 ASP29 LEU30 LEU31 ASP32 THR33 ALA34 ALA35 ALA36 LEU37 TYR38 ARG39 ASP40 ALA41 LEU42 GLU43 SER44 PRO45 GLU46 HIS47 CYS48 SER49 PRO50 HIS51 HIS52 THR53 ALA54 LEU55 ARG56 GLN57 ALA58 ILE59 LEU60 CYS61 TRP62 GLY63 ASP64 LEU65 MET66 THR67 LEU68 ALA69 THR70 TRP71 ARG82 ASP83 LEU84 VAL85 VAL86 SER87 TYR88 VAL89 ASN90 THR91 ASN92 VAL93 GLY94 LEU95 LYS96 PHE97 ARG98 GLN99 LEU100 LEU101 TRP102 PHE103 HIS104 ILE105 SER106 CYS107 LEU108 THR109 PHE110 GLY111 ARG112 GLU113 THR114 VAL115 LEU116 GLU117 TYR118 LEU119 VAL120 SER121 PHE122 GLY123 VAL124 TRP125 ILE126 ARG127 THR128 PRO129 PRO130 ALA131 ALA132 ARG133 PRO134 PRO135 ASN136 ALA137 PRO138 ILE139 LEU140 SER141 THR142 LEU143 PRO144 GLU145 THR146 THR147 VAL148 GLU152 ASN153 LEU154 TYR155 PHE156
Unit 6 SER0 MET1 ASP2 ILE3 ASP4 PRO5 TYR6 LYS7 GLU8 PHE9 GLY10 ALA11 THR12 VAL13 GLU14 LEU15 LEU16 SER17 PHE18 LEU19 PRO20 SER21 ASP22 PHE23 PHE24 PRO25 SER26 VAL27 ARG28 ASP29 LEU30 LEU31 ASP32 THR33 ALA34 ALA35 ALA36 LEU37 TYR38 ARG39 ASP40 ALA41 LEU42 GLU43 SER44 PRO45 GLU46 HIS47 CYS48 SER49 PRO50 HIS51 HIS52 THR53 ALA54 LEU55 ARG56 GLN57 ALA58 ILE59 LEU60 CYS61 TRP62 GLY63 ASP64 LEU65 MET66 THR67 LEU68 ALA69 THR70 TRP71 VAL89 ASN90 THR91 ASN92 VAL93 GLY94 LEU95 LYS96 PHE97 ARG98 GLN99 LEU100 LEU101 TRP102 PHE103 HIS104 ILE105 SER106 CYS107 LEU108 THR109 PHE110 GLY111 ARG112 GLU113 THR114 VAL115 LEU116 GLU117 TYR118 LEU119 VAL120 SER121 PHE122 GLY123 VAL124 TRP125 ILE126 ARG127 THR128 PRO129 PRO130 ALA131 ALA132 ARG133 PRO134 PRO135 ASN136 ALA137 PRO138 ILE139 LEU140 SER141 THR142 LEU143 PRO144 GLU145 THR146 THR147 VAL148 GLU152 ASN153 LEU154 TYR155 PHE156

Ligands
Unit 7 5J6500
Unit 8 5J6500
Unit 9 5J6500
Unit 10 5J6500
Unit 11 5J6500
Unit 12 5J6500

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany