5DVZ - Sequence, Chains, Asymmetric and Biological Units

• Title: HOLO TRPB FROM PYROCOCCUS FURIOSUS
• Keywords: TYPE II PLP ENZYME, TRYPTOPHAN BIOSYNTHESIS, EC 4.2.1.20, LY
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5DVZ	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	TRYPTOPHAN SYNTHASE BETA CHAIN 1	A	384	2918	24
2	Protein	TRYPTOPHAN SYNTHASE BETA CHAIN 1	B	382	2884	24
3	Protein	TRYPTOPHAN SYNTHASE BETA CHAIN 1	C	384	2890	24
4	Protein	TRYPTOPHAN SYNTHASE BETA CHAIN 1	D	385	2923	24
5	Ligand	TRYPTOPHAN SYNTHASE BETA CHAIN 1	A	2	0	6
6	Ligand	TRYPTOPHAN SYNTHASE BETA CHAIN 1	B	2	0	6
7	Ligand	TRYPTOPHAN SYNTHASE BETA CHAIN 1	C	2	0	6
8	Ligand	TRYPTOPHAN SYNTHASE BETA CHAIN 1	D	2	0	6
9	Water			654	0	654
total				2197	11615	774

Proteins

Unit 1	MET 1 TRP 2 PHE 3 GLY 4 GLU 5 PHE 6 GLY 7 GLY 8 GLN 9 TYR 10 VAL 11 PRO 12 GLU 13 THR 14 LEU 15 ILE 16 GLU 17 PRO 18 LEU 19 LYS 20 GLU 21 LEU 22 GLU 23 LYS 24 ALA 25 TYR 26 LYS 27 ARG 28 PHE 29 LYS 30 ASP 31 ASP 32 GLU 33 GLU 34 PHE 35 ASN 36 ARG 37 GLN 38 LEU 39 ASN 40 TYR 41 TYR 42 LEU 43 LYS 44 THR 45 TRP 46 ALA 47 GLY 48 ARG 49 PRO 50 THR 51 PRO 52 LEU 53 TYR 54 TYR 55 ALA 56 LYS 57 ARG 58 LEU 59 THR 60 GLU 61 LYS 62 ILE 63 GLY 64 GLY 65 ALA 66 LYS 67 ILE 68 TYR 69 LEU 70 LYS 71 ARG 72 GLU 73 ASP 74 LEU 75 VAL 76 HIS 77 GLY 78 GLY 79 ALA 80 HIS 81 LLP 82 THR 83 ASN 84 ASN 85 ALA 86 ILE 87 GLY 88 GLN 89 ALA 90 LEU 91 LEU 92 ALA 93 LYS 94 PHE 95 MET 96 GLY 97 LYS 98 THR 99 ARG 100 LEU 101 ILE 102 ALA 103 GLU 104 THR 105 GLY 106 ALA 107 GLY 108 GLN 109 HIS 110 GLY 111 VAL 112 ALA 113 THR 114 ALA 115 MET 116 ALA 117 GLY 118 ALA 119 LEU 120 LEU 121 GLY 122 MET 123 LYS 124 VAL 125 ASP 126 ILE 127 TYR 128 MET 129 GLY 130 ALA 131 GLU 132 ASP 133 VAL 134 GLU 135 ARG 136 GLN 137 LYS 138 MET 139 ASN 140 VAL 141 PHE 142 ARG 143 MET 144 LYS 145 LEU 146 LEU 147 GLY 148 ALA 149 ASN 150 VAL 151 ILE 152 PRO 153 VAL 154 ASN 155 SER 156 GLY 157 SER 158 ARG 159 THR 160 LEU 161 LYS 162 ASP 163 ALA 164 ILE 165 ASN 166 GLU 167 ALA 168 LEU 169 ARG 170 ASP 171 TRP 172 VAL 173 ALA 174 THR 175 PHE 176 GLU 177 TYR 178 THR 179 HIS 180 TYR 181 LEU 182 ILE 183 GLY 184 SER 185 VAL 186 VAL 187 GLY 188 PRO 189 HIS 190 PRO 191 TYR 192 PRO 193 THR 194 ILE 195 VAL 196 ARG 197 ASP 198 PHE 199 GLN 200 SER 201 VAL 202 ILE 203 GLY 204 ARG 205 GLU 206 ALA 207 LYS 208 ALA 209 GLN 210 ILE 211 LEU 212 GLU 213 ALA 214 GLU 215 GLY 216 GLN 217 LEU 218 PRO 219 ASP 220 VAL 221 ILE 222 VAL 223 ALA 224 CYS 225 VAL 226 GLY 227 GLY 228 GLY 229 SER 230 ASN 231 ALA 232 MET 233 GLY 234 ILE 235 PHE 236 TYR 237 PRO 238 PHE 239 VAL 240 ASN 241 ASP 242 LYS 243 LYS 244 VAL 245 LYS 246 LEU 247 VAL 248 GLY 249 VAL 250 GLU 251 ALA 252 GLY 253 GLY 254 LYS 255 GLY 256 LEU 257 GLU 258 SER 259 GLY 260 LYS 261 HIS 262 SER 263 ALA 264 SER 265 LEU 266 ASN 267 ALA 268 GLY 269 GLN 270 VAL 271 GLY 272 VAL 273 PHE 274 HIS 275 GLY 276 MET 277 LEU 278 SER 279 TYR 280 PHE 281 LEU 282 GLN 283 ASP 284 GLU 285 GLU 286 GLY 287 GLN 288 ILE 289 LYS 290 PRO 291 THR 292 HIS 293 SER 294 ILE 295 ALA 296 PRO 297 GLY 298 LEU 299 ASP 300 TYR 301 PRO 302 GLY 303 VAL 304 GLY 305 PRO 306 GLU 307 HIS 308 ALA 309 TYR 310 LEU 311 LYS 312 LYS 313 ILE 314 GLN 315 ARG 316 ALA 317 GLU 318 TYR 319 VAL 320 THR 321 VAL 322 THR 323 ASP 324 GLU 325 GLU 326 ALA 327 LEU 328 LYS 329 ALA 330 PHE 331 HIS 332 GLU 333 LEU 334 SER 335 ARG 336 THR 337 GLU 338 GLY 339 ILE 340 ILE 341 PRO 342 ALA 343 LEU 344 GLU 345 SER 346 ALA 347 HIS 348 ALA 349 VAL 350 ALA 351 TYR 352 ALA 353 MET 354 LYS 355 LEU 356 ALA 357 LYS 358 GLU 359 MET 360 SER 361 ARG 362 ASP 363 GLU 364 ILE 365 ILE 366 ILE 367 VAL 368 ASN 369 LEU 370 SER 371 GLY 372 ARG 373 GLY 374 ASP 375 LYS 376 ASP 377 LEU 378 ASP 379 ILE 380 VAL 381 LEU 382 LYS 383 VAL 384
Unit 2	MET 1 TRP 2 PHE 3 GLY 4 GLU 5 PHE 6 GLY 7 GLY 8 GLN 9 TYR 10 VAL 11 PRO 12 GLU 13 THR 14 LEU 15 ILE 16 GLU 17 PRO 18 LEU 19 LYS 20 GLU 21 LEU 22 GLU 23 LYS 24 ALA 25 TYR 26 LYS 27 ARG 28 PHE 29 LYS 30 ASP 31 ASP 32 GLU 33 GLU 34 PHE 35 ASN 36 ARG 37 GLN 38 LEU 39 ASN 40 TYR 41 TYR 42 LEU 43 LYS 44 THR 45 TRP 46 ALA 47 GLY 48 ARG 49 PRO 50 THR 51 PRO 52 LEU 53 TYR 54 TYR 55 ALA 56 LYS 57 ARG 58 LEU 59 THR 60 GLU 61 LYS 62 ILE 63 GLY 64 GLY 65 ALA 66 LYS 67 ILE 68 TYR 69 LEU 70 LYS 71 ARG 72 GLU 73 ASP 74 LEU 75 VAL 76 HIS 77 GLY 78 GLY 79 ALA 80 HIS 81 LLP 82 THR 83 ASN 84 ASN 85 ALA 86 ILE 87 GLY 88 GLN 89 ALA 90 LEU 91 LEU 92 ALA 93 LYS 94 PHE 95 MET 96 GLY 97 LYS 98 THR 99 ARG 100 LEU 101 ILE 102 ALA 103 GLU 104 THR 105 GLY 106 ALA 107 GLY 108 GLN 109 HIS 110 GLY 111 VAL 112 ALA 113 THR 114 ALA 115 MET 116 ALA 117 GLY 118 ALA 119 LEU 120 LEU 121 GLY 122 MET 123 LYS 124 VAL 125 ASP 126 ILE 127 TYR 128 MET 129 GLY 130 ALA 131 GLU 132 ASP 133 VAL 134 GLU 135 ARG 136 GLN 137 LYS 138 MET 139 ASN 140 VAL 141 PHE 142 ARG 143 MET 144 LYS 145 LEU 146 LEU 147 GLY 148 ALA 149 ASN 150 VAL 151 ILE 152 PRO 153 VAL 154 ASN 155 SER 156 GLY 157 SER 158 ARG 159 THR 160 LEU 161 LYS 162 ASP 163 ALA 164 ILE 165 ASN 166 GLU 167 ALA 168 LEU 169 ARG 170 ASP 171 TRP 172 VAL 173 ALA 174 THR 175 PHE 176 GLU 177 TYR 178 THR 179 HIS 180 TYR 181 LEU 182 ILE 183 GLY 184 SER 185 VAL 186 VAL 187 GLY 188 PRO 189 HIS 190 PRO 191 TYR 192 PRO 193 THR 194 ILE 195 VAL 196 ARG 197 ASP 198 PHE 199 GLN 200 SER 201 VAL 202 ILE 203 GLY 204 ARG 205 GLU 206 ALA 207 LYS 208 ALA 209 GLN 210 ILE 211 LEU 212 GLU 213 ALA 214 GLU 215 GLY 216 GLN 217 LEU 218 PRO 219 ASP 220 VAL 221 ILE 222 VAL 223 ALA 224 CYS 225 VAL 226 GLY 227 GLY 228 GLY 229 SER 230 ASN 231 ALA 232 MET 233 GLY 234 ILE 235 PHE 236 TYR 237 PRO 238 PHE 239 VAL 240 ASN 241 ASP 242 LYS 243 LYS 244 VAL 245 LYS 246 LEU 247 VAL 248 GLY 249 VAL 250 GLU 251 ALA 252 GLY 253 GLY 254 LYS 255 GLY 256 LEU 257 GLU 258 SER 259 GLY 260 LYS 261 HIS 262 SER 263 ALA 264 SER 265 LEU 266 ASN 267 ALA 268 GLY 269 GLN 270 VAL 271 GLY 272 VAL 273 PHE 274 HIS 275 GLY 276 MET 277 LEU 278 SER 279 TYR 280 PHE 281 LEU 282 GLN 283 ASP 284 GLY 287 GLN 288 ILE 289 LYS 290 PRO 291 THR 292 HIS 293 SER 294 ILE 295 ALA 296 PRO 297 GLY 298 LEU 299 ASP 300 TYR 301 PRO 302 GLY 303 VAL 304 GLY 305 PRO 306 GLU 307 HIS 308 ALA 309 TYR 310 LEU 311 LYS 312 LYS 313 ILE 314 GLN 315 ARG 316 ALA 317 GLU 318 TYR 319 VAL 320 THR 321 VAL 322 THR 323 ASP 324 GLU 325 GLU 326 ALA 327 LEU 328 LYS 329 ALA 330 PHE 331 HIS 332 GLU 333 LEU 334 SER 335 ARG 336 THR 337 GLU 338 GLY 339 ILE 340 ILE 341 PRO 342 ALA 343 LEU 344 GLU 345 SER 346 ALA 347 HIS 348 ALA 349 VAL 350 ALA 351 TYR 352 ALA 353 MET 354 LYS 355 LEU 356 ALA 357 LYS 358 GLU 359 MET 360 SER 361 ARG 362 ASP 363 GLU 364 ILE 365 ILE 366 ILE 367 VAL 368 ASN 369 LEU 370 SER 371 GLY 372 ARG 373 GLY 374 ASP 375 LYS 376 ASP 377 LEU 378 ASP 379 ILE 380 VAL 381 LEU 382 LYS 383 VAL 384
Unit 3	MET 1 TRP 2 PHE 3 GLY 4 GLU 5 PHE 6 GLY 7 GLY 8 GLN 9 TYR 10 VAL 11 PRO 12 GLU 13 THR 14 LEU 15 ILE 16 GLU 17 PRO 18 LEU 19 LYS 20 GLU 21 LEU 22 GLU 23 LYS 24 ALA 25 TYR 26 LYS 27 ARG 28 PHE 29 LYS 30 ASP 31 ASP 32 GLU 33 GLU 34 PHE 35 ASN 36 ARG 37 GLN 38 LEU 39 ASN 40 TYR 41 TYR 42 LEU 43 LYS 44 THR 45 TRP 46 ALA 47 GLY 48 ARG 49 PRO 50 THR 51 PRO 52 LEU 53 TYR 54 TYR 55 ALA 56 LYS 57 ARG 58 LEU 59 THR 60 GLU 61 LYS 62 ILE 63 GLY 64 GLY 65 ALA 66 LYS 67 ILE 68 TYR 69 LEU 70 LYS 71 ARG 72 GLU 73 ASP 74 LEU 75 VAL 76 HIS 77 GLY 78 GLY 79 ALA 80 HIS 81 LLP 82 THR 83 ASN 84 ASN 85 ALA 86 ILE 87 GLY 88 GLN 89 ALA 90 LEU 91 LEU 92 ALA 93 LYS 94 PHE 95 MET 96 GLY 97 LYS 98 THR 99 ARG 100 LEU 101 ILE 102 ALA 103 GLU 104 THR 105 GLY 106 ALA 107 GLY 108 GLN 109 HIS 110 GLY 111 VAL 112 ALA 113 THR 114 ALA 115 MET 116 ALA 117 GLY 118 ALA 119 LEU 120 LEU 121 GLY 122 MET 123 LYS 124 VAL 125 ASP 126 ILE 127 TYR 128 MET 129 GLY 130 ALA 131 GLU 132 ASP 133 VAL 134 GLU 135 ARG 136 GLN 137 LYS 138 MET 139 ASN 140 VAL 141 PHE 142 ARG 143 MET 144 LYS 145 LEU 146 LEU 147 GLY 148 ALA 149 ASN 150 VAL 151 ILE 152 PRO 153 VAL 154 ASN 155 SER 156 GLY 157 SER 158 ARG 159 THR 160 LEU 161 LYS 162 ASP 163 ALA 164 ILE 165 ASN 166 GLU 167 ALA 168 LEU 169 ARG 170 ASP 171 TRP 172 VAL 173 ALA 174 THR 175 PHE 176 GLU 177 TYR 178 THR 179 HIS 180 TYR 181 LEU 182 ILE 183 GLY 184 SER 185 VAL 186 VAL 187 GLY 188 PRO 189 HIS 190 PRO 191 TYR 192 PRO 193 THR 194 ILE 195 VAL 196 ARG 197 ASP 198 PHE 199 GLN 200 SER 201 VAL 202 ILE 203 GLY 204 ARG 205 GLU 206 ALA 207 LYS 208 ALA 209 GLN 210 ILE 211 LEU 212 GLU 213 ALA 214 GLU 215 GLY 216 GLN 217 LEU 218 PRO 219 ASP 220 VAL 221 ILE 222 VAL 223 ALA 224 CYS 225 VAL 226 GLY 227 GLY 228 GLY 229 SER 230 ASN 231 ALA 232 MET 233 GLY 234 ILE 235 PHE 236 TYR 237 PRO 238 PHE 239 VAL 240 ASN 241 ASP 242 LYS 243 LYS 244 VAL 245 LYS 246 LEU 247 VAL 248 GLY 249 VAL 250 GLU 251 ALA 252 GLY 253 GLY 254 LYS 255 GLY 256 LEU 257 GLU 258 SER 259 GLY 260 LYS 261 HIS 262 SER 263 ALA 264 SER 265 LEU 266 ASN 267 ALA 268 GLY 269 GLN 270 VAL 271 GLY 272 VAL 273 PHE 274 HIS 275 GLY 276 MET 277 LEU 278 SER 279 TYR 280 PHE 281 LEU 282 GLN 283 ASP 284 GLY 287 GLN 288 ILE 289 LYS 290 PRO 291 THR 292 HIS 293 SER 294 ILE 295 ALA 296 PRO 297 GLY 298 LEU 299 ASP 300 TYR 301 PRO 302 GLY 303 VAL 304 GLY 305 PRO 306 GLU 307 HIS 308 ALA 309 TYR 310 LEU 311 LYS 312 LYS 313 ILE 314 GLN 315 ARG 316 ALA 317 GLU 318 TYR 319 VAL 320 THR 321 VAL 322 THR 323 ASP 324 GLU 325 GLU 326 ALA 327 LEU 328 LYS 329 ALA 330 PHE 331 HIS 332 GLU 333 LEU 334 SER 335 ARG 336 THR 337 GLU 338 GLY 339 ILE 340 ILE 341 PRO 342 ALA 343 LEU 344 GLU 345 SER 346 ALA 347 HIS 348 ALA 349 VAL 350 ALA 351 TYR 352 ALA 353 MET 354 LYS 355 LEU 356 ALA 357 LYS 358 GLU 359 MET 360 SER 361 ARG 362 ASP 363 GLU 364 ILE 365 ILE 366 ILE 367 VAL 368 ASN 369 LEU 370 SER 371 GLY 372 ARG 373 GLY 374 ASP 375 LYS 376 ASP 377 LEU 378 ASP 379 ILE 380 VAL 381 LEU 382 LYS 383 VAL 384 SER 385 GLY 386
Unit 4	MET 1 TRP 2 PHE 3 GLY 4 GLU 5 PHE 6 GLY 7 GLY 8 GLN 9 TYR 10 VAL 11 PRO 12 GLU 13 THR 14 LEU 15 ILE 16 GLU 17 PRO 18 LEU 19 LYS 20 GLU 21 LEU 22 GLU 23 LYS 24 ALA 25 TYR 26 LYS 27 ARG 28 PHE 29 LYS 30 ASP 31 ASP 32 GLU 33 GLU 34 PHE 35 ASN 36 ARG 37 GLN 38 LEU 39 ASN 40 TYR 41 TYR 42 LEU 43 LYS 44 THR 45 TRP 46 ALA 47 GLY 48 ARG 49 PRO 50 THR 51 PRO 52 LEU 53 TYR 54 TYR 55 ALA 56 LYS 57 ARG 58 LEU 59 THR 60 GLU 61 LYS 62 ILE 63 GLY 64 GLY 65 ALA 66 LYS 67 ILE 68 TYR 69 LEU 70 LYS 71 ARG 72 GLU 73 ASP 74 LEU 75 VAL 76 HIS 77 GLY 78 GLY 79 ALA 80 HIS 81 LLP 82 THR 83 ASN 84 ASN 85 ALA 86 ILE 87 GLY 88 GLN 89 ALA 90 LEU 91 LEU 92 ALA 93 LYS 94 PHE 95 MET 96 GLY 97 LYS 98 THR 99 ARG 100 LEU 101 ILE 102 ALA 103 GLU 104 THR 105 GLY 106 ALA 107 GLY 108 GLN 109 HIS 110 GLY 111 VAL 112 ALA 113 THR 114 ALA 115 MET 116 ALA 117 GLY 118 ALA 119 LEU 120 LEU 121 GLY 122 MET 123 LYS 124 VAL 125 ASP 126 ILE 127 TYR 128 MET 129 GLY 130 ALA 131 GLU 132 ASP 133 VAL 134 GLU 135 ARG 136 GLN 137 LYS 138 MET 139 ASN 140 VAL 141 PHE 142 ARG 143 MET 144 LYS 145 LEU 146 LEU 147 GLY 148 ALA 149 ASN 150 VAL 151 ILE 152 PRO 153 VAL 154 ASN 155 SER 156 GLY 157 SER 158 ARG 159 THR 160 LEU 161 LYS 162 ASP 163 ALA 164 ILE 165 ASN 166 GLU 167 ALA 168 LEU 169 ARG 170 ASP 171 TRP 172 VAL 173 ALA 174 THR 175 PHE 176 GLU 177 TYR 178 THR 179 HIS 180 TYR 181 LEU 182 ILE 183 GLY 184 SER 185 VAL 186 VAL 187 GLY 188 PRO 189 HIS 190 PRO 191 TYR 192 PRO 193 THR 194 ILE 195 VAL 196 ARG 197 ASP 198 PHE 199 GLN 200 SER 201 VAL 202 ILE 203 GLY 204 ARG 205 GLU 206 ALA 207 LYS 208 ALA 209 GLN 210 ILE 211 LEU 212 GLU 213 ALA 214 GLU 215 GLY 216 GLN 217 LEU 218 PRO 219 ASP 220 VAL 221 ILE 222 VAL 223 ALA 224 CYS 225 VAL 226 GLY 227 GLY 228 GLY 229 SER 230 ASN 231 ALA 232 MET 233 GLY 234 ILE 235 PHE 236 TYR 237 PRO 238 PHE 239 VAL 240 ASN 241 ASP 242 LYS 243 LYS 244 VAL 245 LYS 246 LEU 247 VAL 248 GLY 249 VAL 250 GLU 251 ALA 252 GLY 253 GLY 254 LYS 255 GLY 256 LEU 257 GLU 258 SER 259 GLY 260 LYS 261 HIS 262 SER 263 ALA 264 SER 265 LEU 266 ASN 267 ALA 268 GLY 269 GLN 270 VAL 271 GLY 272 VAL 273 PHE 274 HIS 275 GLY 276 MET 277 LEU 278 SER 279 TYR 280 PHE 281 LEU 282 GLN 283 ASP 284 GLU 285 GLU 286 GLY 287 GLN 288 ILE 289 LYS 290 PRO 291 THR 292 HIS 293 SER 294 ILE 295 ALA 296 PRO 297 GLY 298 LEU 299 ASP 300 TYR 301 PRO 302 GLY 303 VAL 304 GLY 305 PRO 306 GLU 307 HIS 308 ALA 309 TYR 310 LEU 311 LYS 312 LYS 313 ILE 314 GLN 315 ARG 316 ALA 317 GLU 318 TYR 319 VAL 320 THR 321 VAL 322 THR 323 ASP 324 GLU 325 GLU 326 ALA 327 LEU 328 LYS 329 ALA 330 PHE 331 HIS 332 GLU 333 LEU 334 SER 335 ARG 336 THR 337 GLU 338 GLY 339 ILE 340 ILE 341 PRO 342 ALA 343 LEU 344 GLU 345 SER 346 ALA 347 HIS 348 ALA 349 VAL 350 ALA 351 TYR 352 ALA 353 MET 354 LYS 355 LEU 356 ALA 357 LYS 358 GLU 359 MET 360 SER 361 ARG 362 ASP 363 GLU 364 ILE 365 ILE 366 ILE 367 VAL 368 ASN 369 LEU 370 SER 371 GLY 372 ARG 373 GLY 374 ASP 375 LYS 376 ASP 377 LEU 378 ASP 379 ILE 380 VAL 381 LEU 382 LYS 383 VAL 384 SER 385

Ligands

Unit 5	NA 401 PO4 402
Unit 6	NA 401 PO4 402
Unit 7	NA 401 PO4 402
Unit 8	NA 401 PO4 402