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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF LECTIN FROM THE SEA MUSSEL CRENOMYTILUS GRAYANU
Keywords LECTIN, SEA VERTEBRATE, RECOMBINANT, TREFOIL, SUGAR BINDING
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5DUY     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   GALNAC/GAL-SPECIFIC LECTIN  A 150 1203 0
2  Protein   GALNAC/GAL-SPECIFIC LECTIN  B 150 1203 0
3  Protein   GALNAC/GAL-SPECIFIC LECTIN  C 150 1203 0
4  Protein   GALNAC/GAL-SPECIFIC LECTIN  D 149 1195 0
5  Protein   GALNAC/GAL-SPECIFIC LECTIN  E 150 1203 0
6  Protein   GALNAC/GAL-SPECIFIC LECTIN  F 150 1203 0
7  Ligand   GALNAC/GAL-SPECIFIC LECTIN  A 3 0 18
8  Ligand   GALNAC/GAL-SPECIFIC LECTIN  B 3 0 18
9  Ligand   GALNAC/GAL-SPECIFIC LECTIN  C 3 0 18
10  Ligand   GALNAC/GAL-SPECIFIC LECTIN  D 3 0 18
11  Ligand   GALNAC/GAL-SPECIFIC LECTIN  E 3 0 18
12  Ligand   GALNAC/GAL-SPECIFIC LECTIN  F 3 0 18
13 Water     743 0 743
total       1660 7210 851

Proteins
Unit 1 MET1 THR2 THR3 PHE4 LEU5 ILE6 LYS7 HIS8 LYS9 ALA10 SER11 GLY12 LYS13 PHE14 LEU15 HIS16 PRO17 TYR18 GLY19 GLY20 SER21 SER22 ASN23 PRO24 ALA25 ASN26 ASN27 THR28 LYS29 LEU30 VAL31 LEU32 HIS33 SER34 ASP35 ILE36 HIS37 GLU38 ARG39 MET40 TYR41 PHE42 GLN43 PHE44 ASP45 VAL46 VAL47 ASP48 GLU49 ARG50 TRP51 GLY52 TYR53 ILE54 LYS55 HIS56 VAL57 ALA58 SER59 GLY60 LYS61 ILE62 VAL63 HIS64 PRO65 TYR66 GLY67 GLY68 GLN69 ALA70 ASN71 PRO72 PRO73 ASN74 GLU75 THR76 ASN77 MET78 VAL79 LEU80 HIS81 GLN82 ASP83 ARG84 HIS85 ASP86 ARG87 ALA88 LEU89 PHE90 ALA91 MET92 ASP93 PHE94 PHE95 ASN96 ASP97 ASN98 ILE99 MET100 HIS101 LYS102 GLY103 GLY104 LYS105 TYR106 ILE107 HIS108 PRO109 LYS110 GLY111 GLY112 SER113 PRO114 ASN115 PRO116 PRO117 ASN118 ASN119 THR120 GLU121 THR122 VAL123 ILE124 HIS125 GLY126 ASP127 LYS128 HIS129 ALA130 ALA131 MET132 GLU133 PHE134 ILE135 PHE136 VAL137 SER138 PRO139 LYS140 ASN141 LYS142 ASP143 LYS144 ARG145 VAL146 LEU147 VAL148 TYR149 ALA150
Unit 2 MET1 THR2 THR3 PHE4 LEU5 ILE6 LYS7 HIS8 LYS9 ALA10 SER11 GLY12 LYS13 PHE14 LEU15 HIS16 PRO17 TYR18 GLY19 GLY20 SER21 SER22 ASN23 PRO24 ALA25 ASN26 ASN27 THR28 LYS29 LEU30 VAL31 LEU32 HIS33 SER34 ASP35 ILE36 HIS37 GLU38 ARG39 MET40 TYR41 PHE42 GLN43 PHE44 ASP45 VAL46 VAL47 ASP48 GLU49 ARG50 TRP51 GLY52 TYR53 ILE54 LYS55 HIS56 VAL57 ALA58 SER59 GLY60 LYS61 ILE62 VAL63 HIS64 PRO65 TYR66 GLY67 GLY68 GLN69 ALA70 ASN71 PRO72 PRO73 ASN74 GLU75 THR76 ASN77 MET78 VAL79 LEU80 HIS81 GLN82 ASP83 ARG84 HIS85 ASP86 ARG87 ALA88 LEU89 PHE90 ALA91 MET92 ASP93 PHE94 PHE95 ASN96 ASP97 ASN98 ILE99 MET100 HIS101 LYS102 GLY103 GLY104 LYS105 TYR106 ILE107 HIS108 PRO109 LYS110 GLY111 GLY112 SER113 PRO114 ASN115 PRO116 PRO117 ASN118 ASN119 THR120 GLU121 THR122 VAL123 ILE124 HIS125 GLY126 ASP127 LYS128 HIS129 ALA130 ALA131 MET132 GLU133 PHE134 ILE135 PHE136 VAL137 SER138 PRO139 LYS140 ASN141 LYS142 ASP143 LYS144 ARG145 VAL146 LEU147 VAL148 TYR149 ALA150
Unit 3 MET1 THR2 THR3 PHE4 LEU5 ILE6 LYS7 HIS8 LYS9 ALA10 SER11 GLY12 LYS13 PHE14 LEU15 HIS16 PRO17 TYR18 GLY19 GLY20 SER21 SER22 ASN23 PRO24 ALA25 ASN26 ASN27 THR28 LYS29 LEU30 VAL31 LEU32 HIS33 SER34 ASP35 ILE36 HIS37 GLU38 ARG39 MET40 TYR41 PHE42 GLN43 PHE44 ASP45 VAL46 VAL47 ASP48 GLU49 ARG50 TRP51 GLY52 TYR53 ILE54 LYS55 HIS56 VAL57 ALA58 SER59 GLY60 LYS61 ILE62 VAL63 HIS64 PRO65 TYR66 GLY67 GLY68 GLN69 ALA70 ASN71 PRO72 PRO73 ASN74 GLU75 THR76 ASN77 MET78 VAL79 LEU80 HIS81 GLN82 ASP83 ARG84 HIS85 ASP86 ARG87 ALA88 LEU89 PHE90 ALA91 MET92 ASP93 PHE94 PHE95 ASN96 ASP97 ASN98 ILE99 MET100 HIS101 LYS102 GLY103 GLY104 LYS105 TYR106 ILE107 HIS108 PRO109 LYS110 GLY111 GLY112 SER113 PRO114 ASN115 PRO116 PRO117 ASN118 ASN119 THR120 GLU121 THR122 VAL123 ILE124 HIS125 GLY126 ASP127 LYS128 HIS129 ALA130 ALA131 MET132 GLU133 PHE134 ILE135 PHE136 VAL137 SER138 PRO139 LYS140 ASN141 LYS142 ASP143 LYS144 ARG145 VAL146 LEU147 VAL148 TYR149 ALA150
Unit 4 THR2 THR3 PHE4 LEU5 ILE6 LYS7 HIS8 LYS9 ALA10 SER11 GLY12 LYS13 PHE14 LEU15 HIS16 PRO17 TYR18 GLY19 GLY20 SER21 SER22 ASN23 PRO24 ALA25 ASN26 ASN27 THR28 LYS29 LEU30 VAL31 LEU32 HIS33 SER34 ASP35 ILE36 HIS37 GLU38 ARG39 MET40 TYR41 PHE42 GLN43 PHE44 ASP45 VAL46 VAL47 ASP48 GLU49 ARG50 TRP51 GLY52 TYR53 ILE54 LYS55 HIS56 VAL57 ALA58 SER59 GLY60 LYS61 ILE62 VAL63 HIS64 PRO65 TYR66 GLY67 GLY68 GLN69 ALA70 ASN71 PRO72 PRO73 ASN74 GLU75 THR76 ASN77 MET78 VAL79 LEU80 HIS81 GLN82 ASP83 ARG84 HIS85 ASP86 ARG87 ALA88 LEU89 PHE90 ALA91 MET92 ASP93 PHE94 PHE95 ASN96 ASP97 ASN98 ILE99 MET100 HIS101 LYS102 GLY103 GLY104 LYS105 TYR106 ILE107 HIS108 PRO109 LYS110 GLY111 GLY112 SER113 PRO114 ASN115 PRO116 PRO117 ASN118 ASN119 THR120 GLU121 THR122 VAL123 ILE124 HIS125 GLY126 ASP127 LYS128 HIS129 ALA130 ALA131 MET132 GLU133 PHE134 ILE135 PHE136 VAL137 SER138 PRO139 LYS140 ASN141 LYS142 ASP143 LYS144 ARG145 VAL146 LEU147 VAL148 TYR149 ALA150
Unit 5 MET1 THR2 THR3 PHE4 LEU5 ILE6 LYS7 HIS8 LYS9 ALA10 SER11 GLY12 LYS13 PHE14 LEU15 HIS16 PRO17 TYR18 GLY19 GLY20 SER21 SER22 ASN23 PRO24 ALA25 ASN26 ASN27 THR28 LYS29 LEU30 VAL31 LEU32 HIS33 SER34 ASP35 ILE36 HIS37 GLU38 ARG39 MET40 TYR41 PHE42 GLN43 PHE44 ASP45 VAL46 VAL47 ASP48 GLU49 ARG50 TRP51 GLY52 TYR53 ILE54 LYS55 HIS56 VAL57 ALA58 SER59 GLY60 LYS61 ILE62 VAL63 HIS64 PRO65 TYR66 GLY67 GLY68 GLN69 ALA70 ASN71 PRO72 PRO73 ASN74 GLU75 THR76 ASN77 MET78 VAL79 LEU80 HIS81 GLN82 ASP83 ARG84 HIS85 ASP86 ARG87 ALA88 LEU89 PHE90 ALA91 MET92 ASP93 PHE94 PHE95 ASN96 ASP97 ASN98 ILE99 MET100 HIS101 LYS102 GLY103 GLY104 LYS105 TYR106 ILE107 HIS108 PRO109 LYS110 GLY111 GLY112 SER113 PRO114 ASN115 PRO116 PRO117 ASN118 ASN119 THR120 GLU121 THR122 VAL123 ILE124 HIS125 GLY126 ASP127 LYS128 HIS129 ALA130 ALA131 MET132 GLU133 PHE134 ILE135 PHE136 VAL137 SER138 PRO139 LYS140 ASN141 LYS142 ASP143 LYS144 ARG145 VAL146 LEU147 VAL148 TYR149 ALA150
Unit 6 MET1 THR2 THR3 PHE4 LEU5 ILE6 LYS7 HIS8 LYS9 ALA10 SER11 GLY12 LYS13 PHE14 LEU15 HIS16 PRO17 TYR18 GLY19 GLY20 SER21 SER22 ASN23 PRO24 ALA25 ASN26 ASN27 THR28 LYS29 LEU30 VAL31 LEU32 HIS33 SER34 ASP35 ILE36 HIS37 GLU38 ARG39 MET40 TYR41 PHE42 GLN43 PHE44 ASP45 VAL46 VAL47 ASP48 GLU49 ARG50 TRP51 GLY52 TYR53 ILE54 LYS55 HIS56 VAL57 ALA58 SER59 GLY60 LYS61 ILE62 VAL63 HIS64 PRO65 TYR66 GLY67 GLY68 GLN69 ALA70 ASN71 PRO72 PRO73 ASN74 GLU75 THR76 ASN77 MET78 VAL79 LEU80 HIS81 GLN82 ASP83 ARG84 HIS85 ASP86 ARG87 ALA88 LEU89 PHE90 ALA91 MET92 ASP93 PHE94 PHE95 ASN96 ASP97 ASN98 ILE99 MET100 HIS101 LYS102 GLY103 GLY104 LYS105 TYR106 ILE107 HIS108 PRO109 LYS110 GLY111 GLY112 SER113 PRO114 ASN115 PRO116 PRO117 ASN118 ASN119 THR120 GLU121 THR122 VAL123 ILE124 HIS125 GLY126 ASP127 LYS128 HIS129 ALA130 ALA131 MET132 GLU133 PHE134 ILE135 PHE136 VAL137 SER138 PRO139 LYS140 ASN141 LYS142 ASP143 LYS144 ARG145 VAL146 LEU147 VAL148 TYR149 ALA150

Ligands
Unit 7 GOL201 GOL202 GOL203
Unit 8 GOL201 GOL202 GOL203
Unit 9 GOL201 GOL202 GOL203
Unit 10 GOL201 GOL202 GOL203
Unit 11 GOL201 GOL202 GOL203
Unit 12 GOL201 GOL202 GOL203

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany