5DPT - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF PLEKHM1 LIR-FUSED HUMAN GABARAPL1_2-117
• Keywords: AUTOPHAGY, CHIMERIC PROTEIN, PROTEIN BINDING
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5DPT	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY M ME GAMMA-AMINOBUTYRIC ACID RECEPTOR-ASSOCIATED PROTEIN-LIKE 1, AMINOBUTYRIC ACID RECEPTOR-ASSOCIATED PROTEIN-LIKE 1	A	122	972	0
2	Protein	PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY M ME GAMMA-AMINOBUTYRIC ACID RECEPTOR-ASSOCIATED PROTEIN-LIKE 1, AMINOBUTYRIC ACID RECEPTOR-ASSOCIATED PROTEIN-LIKE 1	B	123	961	0
3	Ligand	PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY M ME GAMMA-AMINOBUTYRIC ACID RECEPTOR-ASSOCIATED PROTEIN-LIKE 1, AMINOBUTYRIC ACID RECEPTOR-ASSOCIATED PROTEIN-LIKE 1	A	1	0	8
4	Ligand	PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY M ME GAMMA-AMINOBUTYRIC ACID RECEPTOR-ASSOCIATED PROTEIN-LIKE 1, AMINOBUTYRIC ACID RECEPTOR-ASSOCIATED PROTEIN-LIKE 1	B	1	0	8
total				247	1933	16

Proteins

Unit 1

GLU 0 ASP 1 GLU 2 TRP 3 VAL 4 ASN 5 VAL 6 GLY 7 SER 8 LYS 9 PHE 10 GLN 11 TYR 12 LYS 13 GLU 14 ASP 15 HIS 16 PRO 17 PHE 18 GLU 19 TYR 20 ARG 21 LYS 22 LYS 23 GLU 24 GLY 25 GLU 26 LYS 27 ILE 28 ARG 29 LYS 30 LYS 31 TYR 32 PRO 33 ASP 34 ARG 35 VAL 36 PRO 37 VAL 38 ILE 39 VAL 40 GLU 41 LYS 42 ALA 43 PRO 44 LYS 45 ALA 46 ARG 47 VAL 48 PRO 49 ASP 50 LEU 51 ASP 52 LYS 53 ARG 54 LYS 55 TYR 56 LEU 57 VAL 58 PRO 59 SER 60 ASP 61 LEU 62 THR 63 VAL 64 GLY 65 GLN 66 PHE 67 TYR 68 PHE 69 LEU 70 ILE 71 ARG 72 LYS 73 ARG 74 ILE 75 HIS 76 LEU 77 ARG 78 PRO 79 GLU 80 ASP 81 ALA 82 LEU 83 PHE 84 PHE 85 PHE 86 VAL 87 ASN 88 ASN 89 THR 90 ILE 91 PRO 92 PRO 93 THR 94 SER 95 ALA 96 THR 97 MET 98 GLY 99 GLN 100 LEU 101 TYR 102 GLU 103 ASP 104 ASN 105 HIS 106 GLU 107 GLU 108 ASP 109 TYR 110 PHE 111 LEU 112 TYR 113 VAL 114 ALA 115 TYR 116 SER 117 ASP 118 GLU 119 SER 120 VAL 121

Unit 2

ASP 1 GLU 2 TRP 3 VAL 4 ASN 5 VAL 6 GLY 7 SER 8 LYS 9 PHE 10 GLN 11 TYR 12 LYS 13 GLU 14 ASP 15 HIS 16 PRO 17 PHE 18 GLU 19 TYR 20 ARG 21 LYS 22 LYS 23 GLU 24 GLY 25 GLU 26 LYS 27 ILE 28 ARG 29 LYS 30 LYS 31 TYR 32 PRO 33 ASP 34 ARG 35 VAL 36 PRO 37 VAL 38 ILE 39 VAL 40 GLU 41 LYS 42 ALA 43 PRO 44 LYS 45 ALA 46 ARG 47 VAL 48 PRO 49 ASP 50 LEU 51 ASP 52 LYS 53 ARG 54 LYS 55 TYR 56 LEU 57 VAL 58 PRO 59 SER 60 ASP 61 LEU 62 THR 63 VAL 64 GLY 65 GLN 66 PHE 67 TYR 68 PHE 69 LEU 70 ILE 71 ARG 72 LYS 73 ARG 74 ILE 75 HIS 76 LEU 77 ARG 78 PRO 79 GLU 80 ASP 81 ALA 82 LEU 83 PHE 84 PHE 85 PHE 86 VAL 87 ASN 88 ASN 89 THR 90 ILE 91 PRO 92 PRO 93 THR 94 SER 95 ALA 96 THR 97 MET 98 GLY 99 GLN 100 LEU 101 TYR 102 GLU 103 ASP 104 ASN 105 HIS 106 GLU 107 GLU 108 ASP 109 TYR 110 PHE 111 LEU 112 TYR 113 VAL 114 ALA 115 TYR 116 SER 117 ASP 118 GLU 119 SER 120 VAL 121 TYR 122 GLY 123

Ligands

Unit 3	MPD 201
Unit 4	MPD 201