5DNF - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF CC CHEMOKINE 5 (CCL5) OLIGOMER IN COMPL HEPARIN
• Keywords: CC CHEMOKINE, HIGH OLIGOMER, CYTOKINE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5DNF	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	C-C MOTIF CHEMOKINE 5	A	65	525	0
2	Protein	C-C MOTIF CHEMOKINE 5	B	65	525	0
3	Protein	C-C MOTIF CHEMOKINE 5	C	65	525	0
4	Protein	C-C MOTIF CHEMOKINE 5	D	65	525	0
5	Protein	C-C MOTIF CHEMOKINE 5	E	65	525	0
6	Protein	C-C MOTIF CHEMOKINE 5	F	65	525	0
7	Protein	C-C MOTIF CHEMOKINE 5	G	65	525	0
8	Protein	C-C MOTIF CHEMOKINE 5	H	65	525	0
9	Protein	C-C MOTIF CHEMOKINE 5	I	65	525	0
10	Ligand		J	3	0	54
11	Ligand		K	3	0	54
12	Ligand		L	3	0	54
13	Ligand	C-C MOTIF CHEMOKINE 5	A	5	0	30
14	Ligand	C-C MOTIF CHEMOKINE 5	B	3	0	10
15	Ligand	C-C MOTIF CHEMOKINE 5	C	6	0	27
16	Ligand	C-C MOTIF CHEMOKINE 5	D	3	0	13
17	Ligand	C-C MOTIF CHEMOKINE 5	E	3	0	18
18	Ligand	C-C MOTIF CHEMOKINE 5	F	5	0	19
19	Ligand	C-C MOTIF CHEMOKINE 5	G	4	0	19
20	Ligand	C-C MOTIF CHEMOKINE 5	H	5	0	30
21	Ligand	C-C MOTIF CHEMOKINE 5	I	3	0	13
22	Water			210	0	210
total				841	4725	551

Proteins

Unit 1	SER 4 SER 5 ASP 6 THR 7 THR 8 PRO 9 CYS 10 CYS 11 PHE 12 ALA 13 TYR 14 ILE 15 ALA 16 ARG 17 PRO 18 LEU 19 PRO 20 ARG 21 ALA 22 HIS 23 ILE 24 LYS 25 GLU 26 TYR 27 PHE 28 TYR 29 THR 30 SER 31 GLY 32 LYS 33 CYS 34 SER 35 ASN 36 PRO 37 ALA 38 VAL 39 VAL 40 PHE 41 VAL 42 THR 43 ARG 44 LYS 45 ASN 46 ARG 47 GLN 48 VAL 49 CYS 50 ALA 51 ASN 52 PRO 53 GLU 54 LYS 55 LYS 56 TRP 57 VAL 58 ARG 59 GLU 60 TYR 61 ILE 62 ASN 63 SER 64 LEU 65 GLU 66 MET 67 SER 68
Unit 2	SER 4 SER 5 ASP 6 THR 7 THR 8 PRO 9 CYS 10 CYS 11 PHE 12 ALA 13 TYR 14 ILE 15 ALA 16 ARG 17 PRO 18 LEU 19 PRO 20 ARG 21 ALA 22 HIS 23 ILE 24 LYS 25 GLU 26 TYR 27 PHE 28 TYR 29 THR 30 SER 31 GLY 32 LYS 33 CYS 34 SER 35 ASN 36 PRO 37 ALA 38 VAL 39 VAL 40 PHE 41 VAL 42 THR 43 ARG 44 LYS 45 ASN 46 ARG 47 GLN 48 VAL 49 CYS 50 ALA 51 ASN 52 PRO 53 GLU 54 LYS 55 LYS 56 TRP 57 VAL 58 ARG 59 GLU 60 TYR 61 ILE 62 ASN 63 SER 64 LEU 65 GLU 66 MET 67 SER 68
Unit 3	SER 4 SER 5 ASP 6 THR 7 THR 8 PRO 9 CYS 10 CYS 11 PHE 12 ALA 13 TYR 14 ILE 15 ALA 16 ARG 17 PRO 18 LEU 19 PRO 20 ARG 21 ALA 22 HIS 23 ILE 24 LYS 25 GLU 26 TYR 27 PHE 28 TYR 29 THR 30 SER 31 GLY 32 LYS 33 CYS 34 SER 35 ASN 36 PRO 37 ALA 38 VAL 39 VAL 40 PHE 41 VAL 42 THR 43 ARG 44 LYS 45 ASN 46 ARG 47 GLN 48 VAL 49 CYS 50 ALA 51 ASN 52 PRO 53 GLU 54 LYS 55 LYS 56 TRP 57 VAL 58 ARG 59 GLU 60 TYR 61 ILE 62 ASN 63 SER 64 LEU 65 GLU 66 MET 67 SER 68
Unit 4	SER 4 SER 5 ASP 6 THR 7 THR 8 PRO 9 CYS 10 CYS 11 PHE 12 ALA 13 TYR 14 ILE 15 ALA 16 ARG 17 PRO 18 LEU 19 PRO 20 ARG 21 ALA 22 HIS 23 ILE 24 LYS 25 GLU 26 TYR 27 PHE 28 TYR 29 THR 30 SER 31 GLY 32 LYS 33 CYS 34 SER 35 ASN 36 PRO 37 ALA 38 VAL 39 VAL 40 PHE 41 VAL 42 THR 43 ARG 44 LYS 45 ASN 46 ARG 47 GLN 48 VAL 49 CYS 50 ALA 51 ASN 52 PRO 53 GLU 54 LYS 55 LYS 56 TRP 57 VAL 58 ARG 59 GLU 60 TYR 61 ILE 62 ASN 63 SER 64 LEU 65 GLU 66 MET 67 SER 68
Unit 5	SER 4 SER 5 ASP 6 THR 7 THR 8 PRO 9 CYS 10 CYS 11 PHE 12 ALA 13 TYR 14 ILE 15 ALA 16 ARG 17 PRO 18 LEU 19 PRO 20 ARG 21 ALA 22 HIS 23 ILE 24 LYS 25 GLU 26 TYR 27 PHE 28 TYR 29 THR 30 SER 31 GLY 32 LYS 33 CYS 34 SER 35 ASN 36 PRO 37 ALA 38 VAL 39 VAL 40 PHE 41 VAL 42 THR 43 ARG 44 LYS 45 ASN 46 ARG 47 GLN 48 VAL 49 CYS 50 ALA 51 ASN 52 PRO 53 GLU 54 LYS 55 LYS 56 TRP 57 VAL 58 ARG 59 GLU 60 TYR 61 ILE 62 ASN 63 SER 64 LEU 65 GLU 66 MET 67 SER 68
Unit 6	SER 4 SER 5 ASP 6 THR 7 THR 8 PRO 9 CYS 10 CYS 11 PHE 12 ALA 13 TYR 14 ILE 15 ALA 16 ARG 17 PRO 18 LEU 19 PRO 20 ARG 21 ALA 22 HIS 23 ILE 24 LYS 25 GLU 26 TYR 27 PHE 28 TYR 29 THR 30 SER 31 GLY 32 LYS 33 CYS 34 SER 35 ASN 36 PRO 37 ALA 38 VAL 39 VAL 40 PHE 41 VAL 42 THR 43 ARG 44 LYS 45 ASN 46 ARG 47 GLN 48 VAL 49 CYS 50 ALA 51 ASN 52 PRO 53 GLU 54 LYS 55 LYS 56 TRP 57 VAL 58 ARG 59 GLU 60 TYR 61 ILE 62 ASN 63 SER 64 LEU 65 GLU 66 MET 67 SER 68
Unit 7	SER 4 SER 5 ASP 6 THR 7 THR 8 PRO 9 CYS 10 CYS 11 PHE 12 ALA 13 TYR 14 ILE 15 ALA 16 ARG 17 PRO 18 LEU 19 PRO 20 ARG 21 ALA 22 HIS 23 ILE 24 LYS 25 GLU 26 TYR 27 PHE 28 TYR 29 THR 30 SER 31 GLY 32 LYS 33 CYS 34 SER 35 ASN 36 PRO 37 ALA 38 VAL 39 VAL 40 PHE 41 VAL 42 THR 43 ARG 44 LYS 45 ASN 46 ARG 47 GLN 48 VAL 49 CYS 50 ALA 51 ASN 52 PRO 53 GLU 54 LYS 55 LYS 56 TRP 57 VAL 58 ARG 59 GLU 60 TYR 61 ILE 62 ASN 63 SER 64 LEU 65 GLU 66 MET 67 SER 68
Unit 8	SER 4 SER 5 ASP 6 THR 7 THR 8 PRO 9 CYS 10 CYS 11 PHE 12 ALA 13 TYR 14 ILE 15 ALA 16 ARG 17 PRO 18 LEU 19 PRO 20 ARG 21 ALA 22 HIS 23 ILE 24 LYS 25 GLU 26 TYR 27 PHE 28 TYR 29 THR 30 SER 31 GLY 32 LYS 33 CYS 34 SER 35 ASN 36 PRO 37 ALA 38 VAL 39 VAL 40 PHE 41 VAL 42 THR 43 ARG 44 LYS 45 ASN 46 ARG 47 GLN 48 VAL 49 CYS 50 ALA 51 ASN 52 PRO 53 GLU 54 LYS 55 LYS 56 TRP 57 VAL 58 ARG 59 GLU 60 TYR 61 ILE 62 ASN 63 SER 64 LEU 65 GLU 66 MET 67 SER 68
Unit 9	SER 4 SER 5 ASP 6 THR 7 THR 8 PRO 9 CYS 10 CYS 11 PHE 12 ALA 13 TYR 14 ILE 15 ALA 16 ARG 17 PRO 18 LEU 19 PRO 20 ARG 21 ALA 22 HIS 23 ILE 24 LYS 25 GLU 26 TYR 27 PHE 28 TYR 29 THR 30 SER 31 GLY 32 LYS 33 CYS 34 SER 35 ASN 36 PRO 37 ALA 38 VAL 39 VAL 40 PHE 41 VAL 42 THR 43 ARG 44 LYS 45 ASN 46 ARG 47 GLN 48 VAL 49 CYS 50 ALA 51 ASN 52 PRO 53 GLU 54 LYS 55 LYS 56 TRP 57 VAL 58 ARG 59 GLU 60 TYR 61 ILE 62 ASN 63 SER 64 LEU 65 GLU 66 MET 67 SER 68

Ligands

Unit 10	SGN 1 IDS 2 SGN 3
Unit 11	SGN 1 IDS 2 SGN 3
Unit 12	SGN 1 IDS 2 SGN 3
Unit 13	GLA 101 BGC 102 SO4 103 CL 104 CL 105
Unit 14	CL 101 CL 102 TRS 103
Unit 15	GLA 101 BGC 102 CL 103 CL 104 CL 105 CL 106
Unit 16	GLA 101 CL 102 CL 103
Unit 17	BGC 101 SO4 102 CL 103
Unit 18	GLA 101 SO4 102 CL 103 CL 104 CL 105
Unit 19	BGC 101 SO4 102 CL 103 CL 104
Unit 20	GLA 101 BGC 102 SO4 103 CL 104 CL 105
Unit 21	GLA 101 CL 102 CL 103