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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF CANDIDA BOIDINII FORMATE DEHYDROGENASE
Keywords ISOZYME, RECOMBINANT, OXIDOREDUCTASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5DNA     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   FORMATE DEHYDROGENASE  A 356 5556 0
2  Protein   FORMATE DEHYDROGENASE  B 353 5501 0
3  Protein   FORMATE DEHYDROGENASE  C 350 5456 0
4  Protein   FORMATE DEHYDROGENASE  D 356 5556 0
5  Ligand   FORMATE DEHYDROGENASE  A 2 0 10
6  Ligand   FORMATE DEHYDROGENASE  B 1 0 5
7  Ligand   FORMATE DEHYDROGENASE  D 2 0 10
8 Water     1777 0 1777
total       3197 22069 1802
Proteins
Unit 1 MET1 LYS2 ILE3 VAL4 LEU5 VAL6 LEU7 TYR8 ASP9 ALA10 GLY11 LYS12 HIS13 ALA14 ALA15 ASP16 GLU17 GLU18 LYS19 LEU20 TYR21 GLY22 CYS23 THR24 GLU25 ASN26 LYS27 LEU28 GLY29 ILE30 ALA31 ASN32 TRP33 LEU34 LYS35 ASP36 GLN37 GLY38 HIS39 GLU40 LEU41 ILE42 THR43 THR44 SER45 ASP46 LYS47 GLU48 GLY49 GLY50 ASN51 SER52 VAL53 LEU54 ASP55 GLN56 HIS57 ILE58 PRO59 ASP60 ALA61 ASP62 ILE63 ILE64 ILE65 THR66 THR67 PRO68 PHE69 HIS70 PRO71 ALA72 TYR73 ILE74 THR75 LYS76 GLU77 ARG78 ILE79 ASP80 LYS81 ALA82 LYS83 LYS84 LEU85 LYS86 LEU87 VAL88 VAL89 VAL90 ALA91 GLY92 VAL93 GLY94 SER95 ASP96 HIS97 ILE98 ASP99 LEU100 ASP101 TYR102 ILE103 ASN104 GLN105 THR106 GLY107 LYS108 LYS109 ILE110 SER111 VAL112 LEU113 GLU114 VAL115 THR116 GLY117 SER118 ASN119 VAL120 VAL121 SER122 VAL123 ALA124 GLU125 HIS126 VAL127 LEU128 MET129 THR130 MET131 LEU132 VAL133 LEU134 VAL135 ARG136 ASN137 PHE138 VAL139 PRO140 ALA141 HIS142 GLU143 GLN144 ILE145 ILE146 ASN147 HIS148 ASP149 TRP150 GLU151 VAL152 ALA153 ALA154 ILE155 ALA156 LYS157 ASP158 ALA159 TYR160 ASP161 ILE162 GLU163 GLY164 LYS165 THR166 ILE167 ALA168 THR169 ILE170 GLY171 ALA172 GLY173 ARG174 ILE175 GLY176 TYR177 ARG178 VAL179 LEU180 GLU181 ARG182 LEU183 VAL184 PRO185 PHE186 ASN187 PRO188 LYS189 GLU190 LEU191 LEU192 TYR193 TYR194 ASP195 TYR196 GLN197 ALA198 LEU199 PRO200 LYS201 ASP202 ALA203 GLU204 GLU205 LYS206 VAL207 GLY208 ALA209 ARG210 ARG211 VAL212 GLU213 ASN214 ILE215 GLU216 GLU217 LEU218 VAL219 ALA220 GLN221 ALA222 ASP223 ILE224 VAL225 THR226 ILE227 ASN228 ALA229 PRO230 LEU231 HIS232 ALA233 GLY234 THR235 LYS236 GLY237 LEU238 ILE239 ASN240 LYS241 GLU242 LEU243 LEU244 SER245 LYS246 PHE247 LYS248 LYS249 GLY250 ALA251 TRP252 LEU253 VAL254 ASN255 THR256 ALA257 ARG258 GLY259 ALA260 ILE261 CYS262 VAL263 ALA264 GLU265 ASP266 VAL267 ALA268 ALA269 ALA270 LEU271 GLU272 SER273 GLY274 GLN275 LEU276 ARG277 GLY278 TYR279 GLY280 GLY281 ASP282 VAL283 TRP284 PHE285 PRO286 GLN287 PRO288 ALA289 PRO290 LYS291 ASP292 HIS293 PRO294 TRP295 ARG296 ASP297 MET298 ARG299 ASN300 LYS301 TYR302 GLY303 ALA304 GLY305 ASN306 ALA307 MET308 THR309 PRO310 HIS311 TYR312 SER313 GLY314 THR315 THR316 LEU317 ASP318 ALA319 GLN320 THR321 ARG322 TYR323 ALA324 GLU325 GLY326 THR327 LYS328 ASN329 ILE330 LEU331 GLU332 SER333 PHE334 PHE335 THR336 GLY337 LYS338 PHE339 ASP340 TYR341 ARG342 PRO343 GLN344 ASP345 ILE346 ILE347 LEU348 LEU349 ASN350 GLY351 GLU352 TYR353 ILE354 THR355 LYS356
Unit 2 MET1 LYS2 ILE3 VAL4 LEU5 VAL6 LEU7 TYR8 ASP9 ALA10 GLY11 LYS12 HIS13 ALA14 ALA15 ASP16 GLU17 GLU18 LYS19 LEU20 TYR21 GLY22 CYS23 THR24 GLU25 ASN26 LYS27 LEU28 GLY29 ILE30 ALA31 ASN32 TRP33 LEU34 LYS35 ASP36 GLN37 GLY38 HIS39 GLU40 LEU41 ILE42 THR43 THR44 SER45 ASP46 LYS47 GLU48 GLY49 GLY50 ASN51 SER52 VAL53 LEU54 ASP55 GLN56 HIS57 ILE58 PRO59 ASP60 ALA61 ASP62 ILE63 ILE64 ILE65 THR66 THR67 PRO68 PHE69 HIS70 PRO71 ALA72 TYR73 ILE74 THR75 LYS76 GLU77 ARG78 ILE79 ASP80 LYS81 ALA82 LYS83 LYS84 LEU85 LYS86 LEU87 VAL88 VAL89 VAL90 ALA91 GLY92 VAL93 GLY94 SER95 ASP96 HIS97 ILE98 ASP99 LEU100 ASP101 TYR102 ILE103 ASN104 GLN105 THR106 GLY107 LYS108 LYS109 ILE110 SER111 VAL112 LEU113 GLU114 VAL115 THR116 GLY117 SER118 ASN119 VAL120 VAL121 SER122 VAL123 ALA124 GLU125 HIS126 VAL127 LEU128 MET129 THR130 MET131 LEU132 VAL133 LEU134 VAL135 ARG136 ASN137 PHE138 VAL139 PRO140 ALA141 HIS142 GLU143 GLN144 ILE145 ILE146 ASN147 HIS148 ASP149 TRP150 GLU151 VAL152 ALA153 ALA154 ILE155 ALA156 LYS157 ASP158 ALA159 TYR160 ASP161 ILE162 GLU163 GLY164 LYS165 THR166 ILE167 ALA168 THR169 ILE170 GLY171 ALA172 GLY173 ARG174 ILE175 GLY176 TYR177 ARG178 VAL179 LEU180 GLU181 ARG182 LEU183 VAL184 PRO185 PHE186 ASN187 PRO188 LYS189 GLU190 LEU191 LEU192 TYR193 TYR194 ASP195 TYR196 GLN197 ALA198 LEU199 PRO200 LYS201 ASP202 ALA203 GLU204 GLU205 LYS206 VAL207 GLY208 ALA209 ARG210 ARG211 VAL212 GLU213 ASN214 ILE215 GLU216 GLU217 LEU218 VAL219 ALA220 GLN221 ALA222 ASP223 ILE224 VAL225 THR226 ILE227 ASN228 ALA229 PRO230 LEU231 HIS232 ALA233 GLY234 THR235 LYS236 GLY237 LEU238 ILE239 ASN240 LYS241 GLU242 LEU243 LEU244 SER245 LYS246 PHE247 LYS248 LYS249 GLY250 ALA251 TRP252 LEU253 VAL254 ASN255 THR256 ALA257 ARG258 GLY259 ALA260 ILE261 CYS262 VAL263 ALA264 GLU265 ASP266 VAL267 ALA268 ALA269 ALA270 LEU271 GLU272 SER273 GLY274 GLN275 LEU276 ARG277 GLY278 TYR279 GLY280 GLY281 ASP282 VAL283 TRP284 PHE285 PRO286 GLN287 PRO288 ALA289 PRO290 LYS291 ASP292 HIS293 PRO294 TRP295 ARG296 ASP297 MET298 ARG299 ASN300 LYS301 TYR302 GLY303 ALA304 GLY305 ASN306 ALA307 MET308 THR309 PRO310 HIS311 TYR312 SER313 GLY314 THR315 THR316 LEU317 ASP318 ALA319 GLN320 THR321 ARG322 TYR323 ALA324 GLU325 GLY326 THR327 LYS328 ASN329 ILE330 LEU331 GLU332 SER333 PHE334 PHE335 THR336 GLY337 LYS338 PHE339 ASP340 TYR341 ARG342 PRO343 GLN344 ASP345 ILE346 ILE347 LEU348 LEU349 ASN350 GLY351 GLU352 TYR353
Unit 3 MET1 LYS2 ILE3 VAL4 LEU5 VAL6 LEU7 TYR8 ASP9 ALA10 GLY11 LYS12 HIS13 ALA14 LYS19 LEU20 TYR21 GLY22 CYS23 THR24 GLU25 ASN26 LYS27 LEU28 GLY29 ILE30 ALA31 ASN32 TRP33 LEU34 LYS35 ASP36 GLN37 GLY38 HIS39 GLU40 LEU41 ILE42 THR43 THR44 SER45 ASP46 LYS47 GLU48 GLY49 GLY50 ASN51 SER52 VAL53 LEU54 ASP55 GLN56 HIS57 ILE58 PRO59 ASP60 ALA61 ASP62 ILE63 ILE64 ILE65 THR66 THR67 PRO68 PHE69 HIS70 PRO71 ALA72 TYR73 ILE74 THR75 LYS76 GLU77 ARG78 ILE79 ASP80 LYS81 ALA82 LYS83 LYS84 LEU85 LYS86 LEU87 VAL88 VAL89 VAL90 ALA91 GLY92 VAL93 GLY94 SER95 ASP96 HIS97 ILE98 ASP99 LEU100 ASP101 TYR102 ILE103 ASN104 GLN105 THR106 GLY107 LYS108 LYS109 ILE110 SER111 VAL112 LEU113 GLU114 VAL115 THR116 GLY117 SER118 ASN119 VAL120 VAL121 SER122 VAL123 ALA124 GLU125 HIS126 VAL127 LEU128 MET129 THR130 MET131 LEU132 VAL133 LEU134 VAL135 ARG136 ASN137 PHE138 VAL139 PRO140 ALA141 HIS142 GLU143 GLN144 ILE145 ILE146 ASN147 HIS148 ASP149 TRP150 GLU151 VAL152 ALA153 ALA154 ILE155 ALA156 LYS157 ASP158 ALA159 TYR160 ASP161 ILE162 GLU163 GLY164 LYS165 THR166 ILE167 ALA168 THR169 ILE170 GLY171 ALA172 GLY173 ARG174 ILE175 GLY176 TYR177 ARG178 VAL179 LEU180 GLU181 ARG182 LEU183 VAL184 PRO185 PHE186 ASN187 PRO188 LYS189 GLU190 LEU191 LEU192 TYR193 TYR194 ASP195 TYR196 GLN197 ALA198 LEU199 PRO200 LYS201 ASP202 ALA203 GLU204 GLU205 LYS206 VAL207 GLY208 ALA209 ARG210 ARG211 VAL212 GLU213 ASN214 ILE215 GLU216 GLU217 LEU218 VAL219 ALA220 GLN221 ALA222 ASP223 ILE224 VAL225 THR226 ILE227 ASN228 ALA229 PRO230 LEU231 HIS232 ALA233 GLY234 THR235 LYS236 GLY237 LEU238 ILE239 ASN240 LYS241 GLU242 LEU243 LEU244 SER245 LYS246 PHE247 LYS248 LYS249 GLY250 ALA251 TRP252 LEU253 VAL254 ASN255 THR256 ALA257 ARG258 GLY259 ALA260 ILE261 CYS262 VAL263 ALA264 GLU265 ASP266 VAL267 ALA268 ALA269 ALA270 LEU271 GLU272 SER273 GLY274 GLN275 LEU276 ARG277 GLY278 TYR279 GLY280 GLY281 ASP282 VAL283 TRP284 PHE285 PRO286 GLN287 PRO288 ALA289 PRO290 LYS291 ASP292 HIS293 PRO294 TRP295 ARG296 ASP297 MET298 ARG299 ASN300 LYS301 TYR302 GLY303 ALA304 GLY305 ASN306 ALA307 MET308 THR309 PRO310 HIS311 TYR312 SER313 GLY314 THR315 THR316 LEU317 ASP318 ALA319 GLN320 THR321 ARG322 TYR323 ALA324 GLU325 GLY326 THR327 LYS328 ASN329 ILE330 LEU331 GLU332 SER333 PHE334 PHE335 THR336 GLY337 LYS338 PHE339 ASP340 TYR341 ARG342 PRO343 GLN344 ASP345 ILE346 ILE347 LEU348 LEU349 ASN350 GLY351 GLU352 TYR353 ILE354
Unit 4 MET1 LYS2 ILE3 VAL4 LEU5 VAL6 LEU7 TYR8 ASP9 ALA10 GLY11 LYS12 HIS13 ALA14 ALA15 ASP16 GLU17 GLU18 LYS19 LEU20 TYR21 GLY22 CYS23 THR24 GLU25 ASN26 LYS27 LEU28 GLY29 ILE30 ALA31 ASN32 TRP33 LEU34 LYS35 ASP36 GLN37 GLY38 HIS39 GLU40 LEU41 ILE42 THR43 THR44 SER45 ASP46 LYS47 GLU48 GLY49 GLY50 ASN51 SER52 VAL53 LEU54 ASP55 GLN56 HIS57 ILE58 PRO59 ASP60 ALA61 ASP62 ILE63 ILE64 ILE65 THR66 THR67 PRO68 PHE69 HIS70 PRO71 ALA72 TYR73 ILE74 THR75 LYS76 GLU77 ARG78 ILE79 ASP80 LYS81 ALA82 LYS83 LYS84 LEU85 LYS86 LEU87 VAL88 VAL89 VAL90 ALA91 GLY92 VAL93 GLY94 SER95 ASP96 HIS97 ILE98 ASP99 LEU100 ASP101 TYR102 ILE103 ASN104 GLN105 THR106 GLY107 LYS108 LYS109 ILE110 SER111 VAL112 LEU113 GLU114 VAL115 THR116 GLY117 SER118 ASN119 VAL120 VAL121 SER122 VAL123 ALA124 GLU125 HIS126 VAL127 LEU128 MET129 THR130 MET131 LEU132 VAL133 LEU134 VAL135 ARG136 ASN137 PHE138 VAL139 PRO140 ALA141 HIS142 GLU143 GLN144 ILE145 ILE146 ASN147 HIS148 ASP149 TRP150 GLU151 VAL152 ALA153 ALA154 ILE155 ALA156 LYS157 ASP158 ALA159 TYR160 ASP161 ILE162 GLU163 GLY164 LYS165 THR166 ILE167 ALA168 THR169 ILE170 GLY171 ALA172 GLY173 ARG174 ILE175 GLY176 TYR177 ARG178 VAL179 LEU180 GLU181 ARG182 LEU183 VAL184 PRO185 PHE186 ASN187 PRO188 LYS189 GLU190 LEU191 LEU192 TYR193 TYR194 ASP195 TYR196 GLN197 ALA198 LEU199 PRO200 LYS201 ASP202 ALA203 GLU204 GLU205 LYS206 VAL207 GLY208 ALA209 ARG210 ARG211 VAL212 GLU213 ASN214 ILE215 GLU216 GLU217 LEU218 VAL219 ALA220 GLN221 ALA222 ASP223 ILE224 VAL225 THR226 ILE227 ASN228 ALA229 PRO230 LEU231 HIS232 ALA233 GLY234 THR235 LYS236 GLY237 LEU238 ILE239 ASN240 LYS241 GLU242 LEU243 LEU244 SER245 LYS246 PHE247 LYS248 LYS249 GLY250 ALA251 TRP252 LEU253 VAL254 ASN255 THR256 ALA257 ARG258 GLY259 ALA260 ILE261 CYS262 VAL263 ALA264 GLU265 ASP266 VAL267 ALA268 ALA269 ALA270 LEU271 GLU272 SER273 GLY274 GLN275 LEU276 ARG277 GLY278 TYR279 GLY280 GLY281 ASP282 VAL283 TRP284 PHE285 PRO286 GLN287 PRO288 ALA289 PRO290 LYS291 ASP292 HIS293 PRO294 TRP295 ARG296 ASP297 MET298 ARG299 ASN300 LYS301 TYR302 GLY303 ALA304 GLY305 ASN306 ALA307 MET308 THR309 PRO310 HIS311 TYR312 SER313 GLY314 THR315 THR316 LEU317 ASP318 ALA319 GLN320 THR321 ARG322 TYR323 ALA324 GLU325 GLY326 THR327 LYS328 ASN329 ILE330 LEU331 GLU332 SER333 PHE334 PHE335 THR336 GLY337 LYS338 PHE339 ASP340 TYR341 ARG342 PRO343 GLN344 ASP345 ILE346 ILE347 LEU348 LEU349 ASN350 GLY351 GLU352 TYR353 ILE354 THR355 LYS356
Ligands
Unit 5 SO4401 SO4402
Unit 6 SO4401
Unit 7 SO4401 SO4402
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany