5DMI - Sequence, Chains, Asymmetric and Biological Units

• Title: STRUCTURE OF THE EXTRACELLULAR DOMAIN OF THE CD40 IN COMPLEX CHI220 FAB
• Keywords: CELL SURFACE RECEPTOR, ANTIBODY-ANTIGEN COMPLEX, ANTITUMOR, SYSTEM-SIGNALING PROTEIN COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5DMI	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein		A	98	698	0
2	Protein	CHI220 FAB HEAVY CHAIN	H	223	1663	0
3	Protein	CHI220 FAB LIGHT CHAIN	L	213	1640	0
4	Ligand	CHI220 FAB HEAVY CHAIN	H	1	0	5
5	Ligand	CHI220 FAB LIGHT CHAIN	L	1	0	5
6	Water			1	0	1
total				537	4001	11

Proteins

Unit 1	THR 24 ALA 25 CYS 26 ARG 27 GLU 28 LYS 29 GLN 30 TYR 31 LEU 32 ILE 33 ASN 34 SER 35 GLN 36 CYS 37 CYS 38 SER 39 LEU 40 CYS 41 GLN 42 PRO 43 GLY 44 GLN 45 LYS 46 LEU 47 VAL 48 SER 49 ASP 50 CYS 51 THR 52 GLU 53 PHE 54 THR 55 GLU 56 THR 57 GLU 58 CYS 59 LEU 60 PRO 61 CYS 62 GLY 63 GLU 64 SER 65 GLU 66 PHE 67 LEU 68 ASP 69 THR 70 TRP 71 ASN 72 ARG 73 GLU 74 THR 75 HIS 76 CYS 77 HIS 78 GLN 79 HIS 80 LYS 81 TYR 82 CYS 83 ASP 84 PRO 85 ASN 86 LEU 87 GLY 88 LEU 89 ARG 90 VAL 91 GLN 92 GLN 93 LYS 94 GLY 95 THR 96 SER 97 GLU 98 THR 99 ASP 100 THR 101 ILE 102 CYS 103 THR 104 CYS 105 GLU 106 GLU 107 GLY 108 TRP 109 HIS 110 CYS 111 THR 112 SER 113 GLU 114 ALA 115 CYS 116 GLU 117 SER 118 CYS 119 VAL 120 LEU 121
Unit 2	GLN 1 ILE 2 GLN 3 LEU 4 VAL 5 GLN 6 SER 7 GLY 8 PRO 9 GLU 10 LEU 11 LYS 12 LYS 13 PRO 14 GLY 15 GLU 16 THR 17 VAL 18 ARG 19 ILE 20 SER 21 CYS 22 LYS 23 ALA 24 SER 25 GLY 26 TYR 27 ALA 28 PHE 29 THR 30 THR 31 THR 32 GLY 33 MET 34 GLN 35 TRP 36 VAL 37 GLN 38 GLU 39 MET 40 PRO 41 GLY 42 LYS 43 GLY 44 LEU 45 LYS 46 TRP 47 ILE 48 GLY 49 TRP 50 ILE 51 ASN 52 THR 52A HIS 53 SER 54 GLY 55 VAL 56 PRO 57 LYS 58 TYR 59 VAL 60 GLU 61 ASP 62 PHE 63 LYS 64 GLY 65 ARG 66 PHE 67 ALA 68 PHE 69 SER 70 LEU 71 GLU 72 THR 73 SER 74 ALA 75 ASN 76 THR 77 ALA 78 TYR 79 LEU 80 GLN 81 ILE 82 SER 82A ASN 82B LEU 82C LYS 83 ASN 84 GLU 85 ASP 86 THR 87 ALA 88 THR 89 TYR 90 PHE 91 CYS 92 VAL 93 ARG 94 SER 95 GLY 96 ASN 97 GLY 98 ASN 99 TYR 100 ASP 100A LEU 100B ALA 100C TYR 100D PHE 100E ALA 101 TYR 102 TRP 103 GLY 104 GLN 105 GLY 106 THR 107 LEU 108 VAL 109 THR 110 VAL 111 SER 112 ALA 113 ALA 114 SER 115 THR 116 LYS 117 GLY 118 PRO 119 SER 120 VAL 121 PHE 122 PRO 123 LEU 124 ALA 125 PRO 126 SER 127 SER 128 LYS 129 SER 130 THR 131 SER 132 GLY 133 GLY 136 THR 137 ALA 138 ALA 139 LEU 140 GLY 141 CYS 142 LEU 143 VAL 144 LYS 145 ASP 146 TYR 147 PHE 148 PRO 149 GLU 150 PRO 151 VAL 152 THR 153 VAL 154 SER 156 TRP 157 ASN 162 SER 163 GLY 164 ALA 165 LEU 166 THR 167 SER 168 GLY 169 VAL 171 HIS 172 THR 173 PHE 174 PRO 175 ALA 176 VAL 177 LEU 178 GLN 179 SER 180 SER 181 GLY 183 LEU 184 TYR 185 SER 186 LEU 187 SER 188 SER 189 VAL 190 VAL 191 THR 192 VAL 193 PRO 194 SER 195 SER 196 SER 199 LEU 200 GLY 202 THR 203 GLN 204 THR 205 TYR 206 ILE 207 CYS 208 ASN 209 VAL 210 ASN 211 HIS 212 LYS 213 PRO 214 SER 215 ASN 216 THR 217 LYS 218 VAL 219 ASP 220 LYS 221 LYS 222 VAL 225 GLU 226 PRO 227 LYS 228
Unit 3	ASP 1 ILE 2 VAL 3 LEU 4 THR 5 GLN 6 SER 7 PRO 8 ALA 9 THR 10 LEU 11 SER 12 VAL 13 THR 14 PRO 15 GLY 16 ASP 17 ARG 18 VAL 19 SER 20 LEU 21 SER 22 CYS 23 ARG 24 ALA 25 SER 26 GLN 27 SER 28 ILE 29 SER 30 ASP 31 TYR 32 LEU 33 HIS 34 TRP 35 TYR 36 GLN 37 GLN 38 LYS 39 SER 40 HIS 41 GLU 42 SER 43 PRO 44 ARG 45 LEU 46 LEU 47 ILE 48 LYS 49 TYR 50 ALA 51 SER 52 HIS 53 SER 54 ILE 55 SER 56 GLY 57 ILE 58 PRO 59 SER 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 GLY 66 SER 67 GLY 68 SER 69 ASP 70 PHE 71 THR 72 LEU 73 SER 74 ILE 75 ASN 76 SER 77 VAL 78 GLU 79 PRO 80 GLU 81 ASP 82 VAL 83 GLY 84 ILE 85 TYR 86 TYR 87 CYS 88 GLN 89 HIS 90 GLY 91 HIS 92 SER 93 PHE 94 PRO 95 TRP 96 THR 97 PHE 98 GLY 99 GLY 100 GLY 101 THR 102 LYS 103 LEU 104 GLU 105 ILE 106 LYS 107 ARG 108 THR 109 VAL 110 ALA 111 ALA 112 PRO 113 SER 114 VAL 115 PHE 116 ILE 117 PHE 118 PRO 119 PRO 120 SER 121 ASP 122 GLU 123 GLN 124 LEU 125 LYS 126 SER 127 GLY 128 THR 129 ALA 130 SER 131 VAL 132 VAL 133 CYS 134 LEU 135 LEU 136 ASN 137 ASN 138 PHE 139 TYR 140 PRO 141 ARG 142 GLU 143 ALA 144 LYS 145 VAL 146 GLN 147 TRP 148 LYS 149 VAL 150 ASP 151 ASN 152 ALA 153 LEU 154 GLN 155 SER 156 GLY 157 ASN 158 SER 159 GLN 160 GLU 161 SER 162 VAL 163 THR 164 GLU 165 GLN 166 ASP 167 SER 168 LYS 169 ASP 170 SER 171 THR 172 TYR 173 SER 174 LEU 175 SER 176 SER 177 THR 178 LEU 179 THR 180 LEU 181 SER 182 LYS 183 ALA 184 ASP 185 TYR 186 GLU 187 LYS 188 HIS 189 LYS 190 VAL 191 TYR 192 ALA 193 CYS 194 GLU 195 VAL 196 THR 197 HIS 198 GLN 199 GLY 200 LEU 201 SER 202 SER 203 PRO 204 VAL 205 THR 206 LYS 207 SER 208 PHE 209 ASN 210 ARG 211 GLY 212 GLU 213

Ligands

Unit 4	SO4 301
Unit 5	SO4 301