5DM5 - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF THE HEXAMERIC THIOESTERASE Y2039 FROM Y PESTIS
• Keywords: THIOESTERASE, HOT-DOG FOLD, HYDROLASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5DM5	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	PUTATIVE ACYL-COA THIOESTER HYDROLASE	A	117	880	0
2	Protein	PUTATIVE ACYL-COA THIOESTER HYDROLASE	B	125	936	0
3	Protein	PUTATIVE ACYL-COA THIOESTER HYDROLASE	C	121	906	0
4	Protein	PUTATIVE ACYL-COA THIOESTER HYDROLASE	D	121	908	0
5	Protein	PUTATIVE ACYL-COA THIOESTER HYDROLASE	E	119	893	0
6	Protein	PUTATIVE ACYL-COA THIOESTER HYDROLASE	F	122	910	0
7	Ligand	PUTATIVE ACYL-COA THIOESTER HYDROLASE	A	1	0	6
8	Ligand	PUTATIVE ACYL-COA THIOESTER HYDROLASE	B	1	0	10
9	Ligand	PUTATIVE ACYL-COA THIOESTER HYDROLASE	C	1	0	10
10	Ligand	PUTATIVE ACYL-COA THIOESTER HYDROLASE	D	1	0	10
11	Ligand	PUTATIVE ACYL-COA THIOESTER HYDROLASE	E	1	0	6
total				730	5433	42

Proteins

Unit 1	SER 13 LEU 14 PRO 15 ASN 16 GLY 17 GLU 18 LEU 19 VAL 20 LEU 21 ARG 22 THR 23 LEU 24 ALA 25 MET 26 PRO 27 ALA 28 ASP 29 THR 30 ASN 31 ALA 32 ASN 33 GLY 34 ASP 35 ILE 36 PHE 37 GLY 38 GLY 39 TRP 40 LEU 41 MET 42 SER 43 GLN 44 MET 45 ASP 46 ILE 47 GLY 48 GLY 49 ALA 50 ILE 51 GLN 52 ALA 53 LYS 54 GLU 55 ILE 56 ALA 57 GLN 58 GLY 59 ARG 60 VAL 61 VAL 62 THR 63 VAL 64 ARG 65 VAL 66 ASP 67 GLY 68 MET 69 THR 70 PHE 71 LEU 72 LYS 73 PRO 74 VAL 75 ALA 76 VAL 77 GLY 78 ASP 79 VAL 80 VAL 81 CYS 82 CYS 83 TYR 84 ALA 85 ARG 86 CYS 87 ILE 88 LYS 89 THR 90 GLY 91 HIS 92 SER 93 SER 94 ILE 95 THR 96 ILE 97 ASN 98 ILE 99 GLU 100 VAL 101 TRP 102 VAL 103 LYS 104 LYS 105 GLU 109 PRO 110 ILE 111 GLY 112 GLN 113 ARG 114 TYR 115 ARG 116 ALA 117 THR 118 GLU 119 ALA 120 VAL 121 PHE 122 THR 123 TYR 124 VAL 125 ALA 126 VAL 127 ASP 128 ASP 129 ALA 130 GLY 131 LYS 132
Unit 2	LEU 14 PRO 15 ASN 16 GLY 17 GLU 18 LEU 19 VAL 20 LEU 21 ARG 22 THR 23 LEU 24 ALA 25 MET 26 PRO 27 ALA 28 ASP 29 THR 30 ASN 31 ALA 32 ASN 33 GLY 34 ASP 35 ILE 36 PHE 37 GLY 38 GLY 39 TRP 40 LEU 41 MET 42 SER 43 GLN 44 MET 45 ASP 46 ILE 47 GLY 48 GLY 49 ALA 50 ILE 51 GLN 52 ALA 53 LYS 54 GLU 55 ILE 56 ALA 57 GLN 58 GLY 59 ARG 60 VAL 61 VAL 62 THR 63 VAL 64 ARG 65 VAL 66 ASP 67 GLY 68 MET 69 THR 70 PHE 71 LEU 72 LYS 73 PRO 74 VAL 75 ALA 76 VAL 77 GLY 78 ASP 79 VAL 80 VAL 81 CYS 82 CYS 83 TYR 84 ALA 85 ARG 86 CYS 87 ILE 88 LYS 89 THR 90 GLY 91 HIS 92 SER 93 SER 94 ILE 95 THR 96 ILE 97 ASN 98 ILE 99 GLU 100 VAL 101 TRP 102 VAL 103 LYS 104 LYS 105 VAL 106 SER 107 SER 108 GLU 109 PRO 110 ILE 111 GLY 112 GLN 113 ARG 114 TYR 115 ARG 116 ALA 117 THR 118 GLU 119 ALA 120 VAL 121 PHE 122 THR 123 TYR 124 VAL 125 ALA 126 VAL 127 ASP 128 ASP 129 ALA 130 GLY 131 LYS 132 PRO 133 ARG 134 GLY 135 LEU 136 PRO 137 SER 138
Unit 3	LEU 14 PRO 15 ASN 16 GLY 17 GLU 18 LEU 19 VAL 20 LEU 21 ARG 22 THR 23 LEU 24 ALA 25 MET 26 PRO 27 ALA 28 ASP 29 THR 30 ASN 31 ALA 32 ASN 33 GLY 34 ASP 35 ILE 36 PHE 37 GLY 38 GLY 39 TRP 40 LEU 41 MET 42 SER 43 GLN 44 MET 45 ASP 46 ILE 47 GLY 48 GLY 49 ALA 50 ILE 51 GLN 52 ALA 53 LYS 54 GLU 55 ILE 56 ALA 57 GLN 58 GLY 59 ARG 60 VAL 61 VAL 62 THR 63 VAL 64 ARG 65 VAL 66 ASP 67 GLY 68 MET 69 THR 70 PHE 71 LEU 72 LYS 73 PRO 74 VAL 75 ALA 76 VAL 77 GLY 78 ASP 79 VAL 80 VAL 81 CYS 82 CYS 83 TYR 84 ALA 85 ARG 86 CYS 87 ILE 88 LYS 89 THR 90 GLY 91 HIS 92 SER 93 SER 94 ILE 95 THR 96 ILE 97 ASN 98 ILE 99 GLU 100 VAL 101 TRP 102 VAL 103 LYS 104 LYS 105 VAL 106 SER 107 GLN 113 ARG 114 TYR 115 ARG 116 ALA 117 THR 118 GLU 119 ALA 120 VAL 121 PHE 122 THR 123 TYR 124 VAL 125 ALA 126 VAL 127 ASP 128 ASP 129 ALA 130 GLY 131 LYS 132 PRO 133 ARG 134 GLY 135 LEU 136 PRO 137 SER 138 GLY 139
Unit 4	SER 13 LEU 14 PRO 15 ASN 16 GLY 17 GLU 18 LEU 19 VAL 20 LEU 21 ARG 22 THR 23 LEU 24 ALA 25 MET 26 PRO 27 ALA 28 ASP 29 THR 30 ASN 31 ALA 32 ASN 33 GLY 34 ASP 35 ILE 36 PHE 37 GLY 38 GLY 39 TRP 40 LEU 41 MET 42 SER 43 GLN 44 MET 45 ASP 46 ILE 47 GLY 48 GLY 49 ALA 50 ILE 51 GLN 52 ALA 53 LYS 54 GLU 55 ILE 56 ALA 57 GLN 58 GLY 59 ARG 60 VAL 61 VAL 62 THR 63 VAL 64 ARG 65 VAL 66 ASP 67 GLY 68 MET 69 THR 70 PHE 71 LEU 72 LYS 73 PRO 74 VAL 75 ALA 76 VAL 77 GLY 78 ASP 79 VAL 80 VAL 81 CYS 82 CYS 83 TYR 84 ALA 85 ARG 86 CYS 87 ILE 88 LYS 89 THR 90 GLY 91 HIS 92 SER 93 SER 94 ILE 95 THR 96 ILE 97 ASN 98 ILE 99 GLU 100 VAL 101 TRP 102 VAL 103 LYS 104 LYS 105 VAL 106 SER 107 GLN 113 ARG 114 TYR 115 ARG 116 ALA 117 THR 118 GLU 119 ALA 120 VAL 121 PHE 122 THR 123 TYR 124 VAL 125 ALA 126 VAL 127 ASP 128 ASP 129 ALA 130 GLY 131 LYS 132 PRO 133 ARG 134 GLY 135 LEU 136 PRO 137 SER 138
Unit 5	LEU 14 PRO 15 ASN 16 GLY 17 GLU 18 LEU 19 VAL 20 LEU 21 ARG 22 THR 23 LEU 24 ALA 25 MET 26 PRO 27 ALA 28 ASP 29 THR 30 ASN 31 ALA 32 ASN 33 GLY 34 ASP 35 ILE 36 PHE 37 GLY 38 GLY 39 TRP 40 LEU 41 MET 42 SER 43 GLN 44 MET 45 ASP 46 ILE 47 GLY 48 GLY 49 ALA 50 ILE 51 GLN 52 ALA 53 LYS 54 GLU 55 ILE 56 ALA 57 GLN 58 GLY 59 ARG 60 VAL 61 VAL 62 THR 63 VAL 64 ARG 65 VAL 66 ASP 67 GLY 68 MET 69 THR 70 PHE 71 LEU 72 LYS 73 PRO 74 VAL 75 ALA 76 VAL 77 GLY 78 ASP 79 VAL 80 VAL 81 CYS 82 CYS 83 TYR 84 ALA 85 ARG 86 CYS 87 ILE 88 LYS 89 THR 90 GLY 91 HIS 92 SER 93 SER 94 ILE 95 THR 96 ILE 97 ASN 98 ILE 99 GLU 100 VAL 101 TRP 102 VAL 103 LYS 104 LYS 105 GLN 113 ARG 114 TYR 115 ARG 116 ALA 117 THR 118 GLU 119 ALA 120 VAL 121 PHE 122 THR 123 TYR 124 VAL 125 ALA 126 VAL 127 ASP 128 ASP 129 ALA 130 GLY 131 LYS 132 PRO 133 ARG 134 GLY 135 LEU 136 PRO 137 SER 138 GLY 139
Unit 6	LEU 14 PRO 15 ASN 16 GLY 17 GLU 18 LEU 19 VAL 20 LEU 21 ARG 22 THR 23 LEU 24 ALA 25 MET 26 PRO 27 ALA 28 ASP 29 THR 30 ASN 31 ALA 32 ASN 33 GLY 34 ASP 35 ILE 36 PHE 37 GLY 38 GLY 39 TRP 40 LEU 41 MET 42 SER 43 GLN 44 MET 45 ASP 46 ILE 47 GLY 48 GLY 49 ALA 50 ILE 51 GLN 52 ALA 53 LYS 54 GLU 55 ILE 56 ALA 57 GLN 58 GLY 59 ARG 60 VAL 61 VAL 62 THR 63 VAL 64 ARG 65 VAL 66 ASP 67 GLY 68 MET 69 THR 70 PHE 71 LEU 72 LYS 73 PRO 74 VAL 75 ALA 76 VAL 77 GLY 78 ASP 79 VAL 80 VAL 81 CYS 82 CYS 83 TYR 84 ALA 85 ARG 86 CYS 87 ILE 88 LYS 89 THR 90 GLY 91 HIS 92 SER 93 SER 94 ILE 95 THR 96 ILE 97 ASN 98 ILE 99 GLU 100 VAL 101 TRP 102 VAL 103 LYS 104 LYS 105 VAL 106 SER 107 GLY 112 GLN 113 ARG 114 TYR 115 ARG 116 ALA 117 THR 118 GLU 119 ALA 120 VAL 121 PHE 122 THR 123 TYR 124 VAL 125 ALA 126 VAL 127 ASP 128 ASP 129 ALA 130 GLY 131 LYS 132 PRO 133 ARG 134 GLY 135 LEU 136 PRO 137 SER 138 GLY 139

Ligands

Unit 7	GOL 201
Unit 8	PGE 201
Unit 9	PGE 201
Unit 10	PGE 201
Unit 11	GOL 201