5DIR - Sequence, Chains, Asymmetric and Biological Units

• Title: MEMBRANE PROTEIN AT 2.8 ANGSTROMS
• Keywords: MEMBRANE PROTEIN, PROTEASE, ANTIBIOTIC, COMPLEX, HYDROLASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5DIR	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	LIPOPROTEIN SIGNAL PEPTIDASE	A	157	1261	0
2	Protein	LIPOPROTEIN SIGNAL PEPTIDASE	B	149	1198	0
3	Protein	LIPOPROTEIN SIGNAL PEPTIDASE	C	149	1197	0
4	Protein	LIPOPROTEIN SIGNAL PEPTIDASE	D	149	1197	0
5	Protein	GLOBOMYCIN	E	5	6	40
6	Protein	GLOBOMYCIN	F	5	6	40
7	Protein	GLOBOMYCIN	G	5	6	40
8	Protein	GLOBOMYCIN	H	5	6	40
9	Ligand	LIPOPROTEIN SIGNAL PEPTIDASE	A	6	0	150
10	Ligand	LIPOPROTEIN SIGNAL PEPTIDASE	B	7	0	175
11	Ligand	LIPOPROTEIN SIGNAL PEPTIDASE	C	4	0	100
12	Ligand	LIPOPROTEIN SIGNAL PEPTIDASE	D	5	0	125
13	Ligand	GLOBOMYCIN	F	2	0	50
14	Water			16	0	16
total				664	4877	776

Proteins

Unit 1	PRO 2 ASP 3 VAL 4 ASP 5 ARG 6 PHE 7 GLY 8 ARG 9 LEU 10 PRO 11 TRP 12 LEU 13 TRP 14 ILE 15 THR 16 VAL 17 LEU 18 VAL 19 PHE 20 VAL 21 LEU 22 ASP 23 GLN 24 VAL 25 SER 26 LYS 27 ALA 28 PHE 29 PHE 30 GLN 31 ALA 32 GLU 33 LEU 34 SER 35 MET 36 TYR 37 GLN 38 GLN 39 ILE 40 VAL 41 VAL 42 ILE 43 PRO 44 ASP 45 LEU 46 PHE 47 SER 48 TRP 49 THR 50 LEU 51 ALA 52 TYR 53 ASN 54 THR 55 GLY 56 ALA 57 ALA 58 PHE 59 SER 60 PHE 61 LEU 62 ALA 63 ASP 64 SER 65 SER 66 GLY 67 TRP 68 GLN 69 ARG 70 TRP 71 LEU 72 PHE 73 ALA 74 LEU 75 ILE 76 ALA 77 ILE 78 VAL 79 VAL 80 SER 81 ALA 82 SER 83 LEU 84 VAL 85 VAL 86 TRP 87 LEU 88 LYS 89 ARG 90 LEU 91 LYS 92 LYS 93 GLY 94 GLU 95 THR 96 TRP 97 LEU 98 ALA 99 ILE 100 ALA 101 LEU 102 ALA 103 LEU 104 VAL 105 LEU 106 GLY 107 GLY 108 ALA 109 LEU 110 GLY 111 ASN 112 LEU 113 TYR 114 ASP 115 ARG 116 MET 117 VAL 118 LEU 119 GLY 120 HIS 121 VAL 122 VAL 123 ASP 124 PHE 125 ILE 126 LEU 127 VAL 128 HIS 129 TRP 130 GLN 131 ASN 132 ARG 133 TRP 134 TYR 135 PHE 136 PRO 137 ALA 138 PHE 139 ASN 140 LEU 141 ALA 142 ASP 143 SER 144 ALA 145 ILE 146 THR 147 VAL 148 GLY 149 ALA 150 VAL 151 MET 152 LEU 153 ALA 154 LEU 155 ASP 156 MET 157 PHE 158
Unit 2	PRO 2 ASP 3 VAL 4 ASP 5 ARG 6 PHE 7 GLY 8 ARG 9 LEU 10 PRO 11 TRP 12 LEU 13 TRP 14 ILE 15 THR 16 VAL 17 LEU 18 VAL 19 PHE 20 VAL 21 LEU 22 ASP 23 GLN 24 VAL 25 SER 26 LYS 27 ALA 28 PHE 29 PHE 30 GLN 31 ALA 32 GLU 33 LEU 34 SER 35 MET 36 TYR 37 GLN 38 GLN 39 ILE 40 VAL 41 VAL 42 ILE 43 PRO 44 ASP 45 LEU 46 PHE 47 SER 48 TRP 49 THR 50 LEU 51 ALA 52 TYR 53 ASN 54 THR 55 GLY 56 ALA 57 ALA 58 PHE 59 SER 60 GLY 67 TRP 68 GLN 69 ARG 70 TRP 71 LEU 72 PHE 73 ALA 74 LEU 75 ILE 76 ALA 77 ILE 78 VAL 79 VAL 80 SER 81 ALA 82 SER 83 LEU 84 VAL 85 VAL 86 TRP 87 LEU 88 LYS 89 ARG 90 LEU 91 LYS 92 LYS 93 GLY 94 GLU 95 THR 96 TRP 97 LEU 98 ALA 99 ILE 100 ALA 101 LEU 102 ALA 103 LEU 104 VAL 105 LEU 106 GLY 107 GLY 108 ALA 109 LEU 110 GLY 111 ASN 112 LEU 113 TYR 114 ASP 115 ARG 116 MET 117 VAL 118 LEU 119 GLY 120 HIS 121 VAL 122 VAL 123 ASP 124 PHE 125 ILE 126 LEU 127 VAL 128 HIS 129 TRP 130 GLN 131 ASN 132 ARG 133 TRP 134 TYR 135 PHE 136 PRO 137 ALA 138 PHE 139 ASN 140 LEU 141 ALA 142 ASP 143 SER 144 ALA 145 ILE 146 THR 147 VAL 148 GLY 149 ALA 150 VAL 151 MET 152 LEU 153 ALA 154 LEU 155 ASP 156
Unit 3	PRO 11 TRP 12 LEU 13 TRP 14 ILE 15 THR 16 VAL 17 LEU 18 VAL 19 PHE 20 VAL 21 LEU 22 ASP 23 GLN 24 VAL 25 SER 26 LYS 27 ALA 28 PHE 29 PHE 30 GLN 31 ALA 32 GLU 33 LEU 34 SER 35 MET 36 TYR 37 GLN 38 GLN 39 ILE 40 VAL 41 VAL 42 ILE 43 PRO 44 ASP 45 LEU 46 PHE 47 SER 48 TRP 49 THR 50 LEU 51 ALA 52 TYR 53 ASN 54 THR 55 GLY 56 ALA 57 ALA 58 PHE 59 SER 60 PHE 61 LEU 62 ALA 63 ASP 64 SER 65 SER 66 GLY 67 TRP 68 GLN 69 ARG 70 TRP 71 LEU 72 PHE 73 ALA 74 LEU 75 ILE 76 ALA 77 ILE 78 VAL 79 VAL 80 SER 81 ALA 82 SER 83 LEU 84 VAL 85 VAL 86 TRP 87 LEU 88 LYS 89 ARG 90 LEU 91 LYS 92 LYS 93 GLY 94 GLU 95 THR 96 TRP 97 LEU 98 ALA 99 ILE 100 ALA 101 LEU 102 ALA 103 LEU 104 VAL 105 LEU 106 GLY 107 GLY 108 ALA 109 LEU 110 GLY 111 ASN 112 LEU 113 TYR 114 ASP 115 ARG 116 MET 117 VAL 118 LEU 119 GLY 120 HIS 121 VAL 122 VAL 123 ASP 124 PHE 125 ILE 126 LEU 127 VAL 128 HIS 129 TRP 130 GLN 131 ASN 132 ARG 133 TRP 134 TYR 135 PHE 136 PRO 137 ALA 138 PHE 139 ASN 140 LEU 141 ALA 142 ASP 143 SER 144 ALA 145 ILE 146 THR 147 VAL 148 GLY 149 ALA 150 VAL 151 MET 152 LEU 153 ALA 154 LEU 155 ASP 156 MET 157 PHE 158 ARG 159
Unit 4	PRO 11 TRP 12 LEU 13 TRP 14 ILE 15 THR 16 VAL 17 LEU 18 VAL 19 PHE 20 VAL 21 LEU 22 ASP 23 GLN 24 VAL 25 SER 26 LYS 27 ALA 28 PHE 29 PHE 30 GLN 31 ALA 32 GLU 33 LEU 34 SER 35 MET 36 TYR 37 GLN 38 GLN 39 ILE 40 VAL 41 VAL 42 ILE 43 PRO 44 ASP 45 LEU 46 PHE 47 SER 48 TRP 49 THR 50 LEU 51 ALA 52 TYR 53 ASN 54 THR 55 GLY 56 ALA 57 ALA 58 PHE 59 SER 60 PHE 61 LEU 62 ALA 63 ASP 64 SER 65 SER 66 GLY 67 TRP 68 GLN 69 ARG 70 TRP 71 LEU 72 PHE 73 ALA 74 LEU 75 ILE 76 ALA 77 ILE 78 VAL 79 VAL 80 SER 81 ALA 82 SER 83 LEU 84 VAL 85 VAL 86 TRP 87 LEU 88 LYS 89 ARG 90 LEU 91 LYS 92 LYS 93 GLY 94 GLU 95 THR 96 TRP 97 LEU 98 ALA 99 ILE 100 ALA 101 LEU 102 ALA 103 LEU 104 VAL 105 LEU 106 GLY 107 GLY 108 ALA 109 LEU 110 GLY 111 ASN 112 LEU 113 TYR 114 ASP 115 ARG 116 MET 117 VAL 118 LEU 119 GLY 120 HIS 121 VAL 122 VAL 123 ASP 124 PHE 125 ILE 126 LEU 127 VAL 128 HIS 129 TRP 130 GLN 131 ASN 132 ARG 133 TRP 134 TYR 135 PHE 136 PRO 137 ALA 138 PHE 139 ASN 140 LEU 141 ALA 142 ASP 143 SER 144 ALA 145 ILE 146 THR 147 VAL 148 GLY 149 ALA 150 VAL 151 MET 152 LEU 153 ALA 154 LEU 155 ASP 156 MET 157 PHE 158 ARG 159
Unit 5	MLE 201 IIL 202 SER 203 ALO 204 5BV 205
Unit 6	MLE 201 IIL 202 SER 203 ALO 204 5BV 205
Unit 7	MLE 201 IIL 202 SER 203 ALO 204 5BV 205
Unit 8	MLE 201 IIL 202 SER 203 ALO 204 5BV 205

Ligands

Unit 9	OLC 201 OLC 202 OLC 203 OLC 204 OLC 205 OLC 206
Unit 10	OLC 201 OLC 202 OLC 203 OLC 204 OLC 205 OLC 206 OLC 207
Unit 11	OLC 201 OLC 202 OLC 203 OLC 204
Unit 12	OLC 201 OLC 202 OLC 203 OLC 204 OLC 205
Unit 13	OLC 301 OLC 302