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| Title | TWO DIVALENT METAL IONS AND CONFORMATIONAL CHANGES PLAY ROLE HAMMERHEAD RIBOZYME CLEAVAGE REACTION-G12A MUTANT IN MG2+ | |
| Keywords | RIBOZYME, HAMMERHEAD, RNA | |
| Experiment | X-ray diffraction | |
| Number of Models | 1 |
| Database | ID code | Status | Coordinate files | ||
| Header | Asymmetric unit | Biological unit | |||
| PDB | 5DH6 | released | available | available | Quaternary Structure Server |
| Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
|---|---|---|---|---|---|---|
| 1 | RNA | A | 48 | 1549 | 0 | |
| 2 | RNA | B | 20 | 645 | 0 | |
| 3 | Ligand | HAMMERHEAD RIBOZYME | A | 4 | 0 | 4 |
| 4 | Ligand | 5'-R(*GP*GP*GP*CP*GP*U)-D(P*C)- R(P*UP*GP*GP*GP*CP*AP*GP*UP*AP*CP*CP*CP*A)-3' | B | 1 | 0 | 1 |
| 5 | Water | 8 | 0 | 8 | ||
| total | 81 | 2194 | 13 |
| Unit 1 | G1 G2 G3 U4 A5 C6 U7 U8 A9 A10 G11 C12 C13 C14 A15 C16 U17 G18 A19 U20 G21 A22 G23 U24 C25 G26 C27 U28 G29 G30 G31 A32 U33 G34 C35 G36 A37 C38 A39 A40 A41 A42 C43 G44 C45 C46 C47 A48 |
| Unit 2 | G1 G2 G3 C4 G5 U6 DC7 U8 G9 G10 G11 C12 A13 G14 U15 A16 C17 C18 C19 A20 |
| Unit 3 | MG101 MG102 MG103 MG104 |
| Unit 4 | MG101 |
Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.
| Perl script: | PDBscan.pl (15 Sep 2016) |
| Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |