5DG3 - Sequence, Chains, Asymmetric and Biological Units

• Title: STRUCTURE OF PSEUDOMONAS AERUGINOSA LPXA IN COMPLEX WITH UDP HYDROXYDECANOYL)-GLCNAC
• Keywords: ACYLTRANSFERASES, CATALYTIC DOMAIN, UDP-GLCNAC, FATTY ACIDS, SUBSTRATE SPECIFICITY, URIDINE DIPHOSPHATE N-ACETYLGLUCOSAM HYDROCARBON RULERS, TRANSFERASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5DG3	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	ACYL-[ACYL-CARRIER-PROTEIN]--UDP-N-ACETYLGLUCOSAM ACYLTRANSFERASE	A	256	1944	0
2	Protein	ACYL-[ACYL-CARRIER-PROTEIN]--UDP-N-ACETYLGLUCOSAM ACYLTRANSFERASE	B	257	1966	0
3	Protein	ACYL-[ACYL-CARRIER-PROTEIN]--UDP-N-ACETYLGLUCOSAM ACYLTRANSFERASE	C	256	1950	0
4	Protein	ACYL-[ACYL-CARRIER-PROTEIN]--UDP-N-ACETYLGLUCOSAM ACYLTRANSFERASE	D	249	1889	0
5	Protein	ACYL-[ACYL-CARRIER-PROTEIN]--UDP-N-ACETYLGLUCOSAM ACYLTRANSFERASE	E	256	1948	0
6	Protein	ACYL-[ACYL-CARRIER-PROTEIN]--UDP-N-ACETYLGLUCOSAM ACYLTRANSFERASE	F	257	1966	0
7	Ligand	ACYL-[ACYL-CARRIER-PROTEIN]--UDP-N-ACETYLGLUCOSAM ACYLTRANSFERASE	B	1	0	51
8	Ligand	ACYL-[ACYL-CARRIER-PROTEIN]--UDP-N-ACETYLGLUCOSAM ACYLTRANSFERASE	C	1	0	51
9	Ligand	ACYL-[ACYL-CARRIER-PROTEIN]--UDP-N-ACETYLGLUCOSAM ACYLTRANSFERASE	D	1	0	51
10	Ligand	ACYL-[ACYL-CARRIER-PROTEIN]--UDP-N-ACETYLGLUCOSAM ACYLTRANSFERASE	E	2	0	56
11	Water			231	0	231
total				1767	11663	440

Proteins

Unit 1	LEU 3 ILE 4 ASP 5 PRO 6 ARG 7 ALA 8 ILE 9 ILE 10 ASP 11 PRO 12 SER 13 ALA 14 ARG 15 LEU 16 ALA 17 ALA 18 ASP 19 VAL 20 GLN 21 VAL 22 GLY 23 PRO 24 TRP 25 SER 26 ILE 27 VAL 28 GLY 29 ALA 30 GLU 31 VAL 32 GLU 33 ILE 34 GLY 35 GLU 36 GLY 37 THR 38 VAL 39 ILE 40 GLY 41 PRO 42 HIS 43 VAL 44 VAL 45 LEU 46 LYS 47 GLY 48 PRO 49 THR 50 LYS 51 ILE 52 GLY 53 LYS 54 HIS 55 ASN 56 ARG 57 ILE 58 TYR 59 GLN 60 PHE 61 SER 62 SER 63 VAL 64 GLY 65 GLU 66 ASP 67 THR 68 PRO 69 ASP 70 LEU 71 LYS 72 TYR 73 LYS 74 GLY 75 GLU 76 PRO 77 THR 78 ARG 79 LEU 80 VAL 81 ILE 82 GLY 83 ASP 84 HIS 85 ASN 86 VAL 87 ILE 88 ARG 89 GLU 90 GLY 91 VAL 92 THR 93 ILE 94 HIS 95 ARG 96 GLY 97 THR 98 VAL 99 GLN 100 ASP 101 ARG 102 ALA 103 GLU 104 THR 105 THR 106 ILE 107 GLY 108 ASP 109 HIS 110 ASN 111 LEU 112 ILE 113 MET 114 ALA 115 TYR 116 ALA 117 HIS 118 ILE 119 GLY 120 HIS 121 ASP 122 SER 123 VAL 124 ILE 125 GLY 126 ASN 127 HIS 128 CYS 129 ILE 130 LEU 131 VAL 132 ASN 133 ASN 134 THR 135 ALA 136 LEU 137 ALA 138 GLY 139 HIS 140 VAL 141 HIS 142 VAL 143 ASP 144 ASP 145 TRP 146 ALA 147 ILE 148 LEU 149 SER 150 GLY 151 TYR 152 THR 153 LEU 154 VAL 155 HIS 156 GLN 157 TYR 158 CYS 159 ARG 160 ILE 161 GLY 162 ALA 163 HIS 164 SER 165 PHE 166 SER 167 GLY 168 MET 169 GLY 170 SER 171 ALA 172 ILE 173 GLY 174 LYS 175 ASP 176 VAL 177 PRO 178 ALA 179 TYR 180 VAL 181 THR 182 VAL 183 PHE 184 GLY 185 ASN 186 PRO 187 ALA 188 GLU 189 ALA 190 ARG 191 SER 192 MET 193 ASN 194 PHE 195 GLU 196 GLY 197 MET 198 ARG 199 ARG 200 ARG 201 GLY 202 PHE 203 SER 204 SER 205 GLU 206 ALA 207 ILE 208 HIS 209 ALA 210 LEU 211 ARG 212 ARG 213 ALA 214 TYR 215 LYS 216 VAL 217 VAL 218 TYR 219 ARG 220 GLN 221 GLY 222 HIS 223 THR 224 VAL 225 GLU 226 GLU 227 ALA 228 LEU 229 ALA 230 GLU 231 LEU 232 ALA 233 GLU 234 SER 235 ALA 236 ALA 237 GLN 238 PHE 239 PRO 240 GLU 241 VAL 242 ALA 243 VAL 244 PHE 245 ARG 246 ASP 247 SER 248 ILE 249 GLN 250 SER 251 ALA 252 THR 253 ARG 254 GLY 255 ILE 256 THR 257 ARG 258
Unit 2	SER 2 LEU 3 ILE 4 ASP 5 PRO 6 ARG 7 ALA 8 ILE 9 ILE 10 ASP 11 PRO 12 SER 13 ALA 14 ARG 15 LEU 16 ALA 17 ALA 18 ASP 19 VAL 20 GLN 21 VAL 22 GLY 23 PRO 24 TRP 25 SER 26 ILE 27 VAL 28 GLY 29 ALA 30 GLU 31 VAL 32 GLU 33 ILE 34 GLY 35 GLU 36 GLY 37 THR 38 VAL 39 ILE 40 GLY 41 PRO 42 HIS 43 VAL 44 VAL 45 LEU 46 LYS 47 GLY 48 PRO 49 THR 50 LYS 51 ILE 52 GLY 53 LYS 54 HIS 55 ASN 56 ARG 57 ILE 58 TYR 59 GLN 60 PHE 61 SER 62 SER 63 VAL 64 GLY 65 GLU 66 ASP 67 THR 68 PRO 69 ASP 70 LEU 71 LYS 72 TYR 73 LYS 74 GLY 75 GLU 76 PRO 77 THR 78 ARG 79 LEU 80 VAL 81 ILE 82 GLY 83 ASP 84 HIS 85 ASN 86 VAL 87 ILE 88 ARG 89 GLU 90 GLY 91 VAL 92 THR 93 ILE 94 HIS 95 ARG 96 GLY 97 THR 98 VAL 99 GLN 100 ASP 101 ARG 102 ALA 103 GLU 104 THR 105 THR 106 ILE 107 GLY 108 ASP 109 HIS 110 ASN 111 LEU 112 ILE 113 MET 114 ALA 115 TYR 116 ALA 117 HIS 118 ILE 119 GLY 120 HIS 121 ASP 122 SER 123 VAL 124 ILE 125 GLY 126 ASN 127 HIS 128 CYS 129 ILE 130 LEU 131 VAL 132 ASN 133 ASN 134 THR 135 ALA 136 LEU 137 ALA 138 GLY 139 HIS 140 VAL 141 HIS 142 VAL 143 ASP 144 ASP 145 TRP 146 ALA 147 ILE 148 LEU 149 SER 150 GLY 151 TYR 152 THR 153 LEU 154 VAL 155 HIS 156 GLN 157 TYR 158 CYS 159 ARG 160 ILE 161 GLY 162 ALA 163 HIS 164 SER 165 PHE 166 SER 167 GLY 168 MET 169 GLY 170 SER 171 ALA 172 ILE 173 GLY 174 LYS 175 ASP 176 VAL 177 PRO 178 ALA 179 TYR 180 VAL 181 THR 182 VAL 183 PHE 184 GLY 185 ASN 186 PRO 187 ALA 188 GLU 189 ALA 190 ARG 191 SER 192 MET 193 ASN 194 PHE 195 GLU 196 GLY 197 MET 198 ARG 199 ARG 200 ARG 201 GLY 202 PHE 203 SER 204 SER 205 GLU 206 ALA 207 ILE 208 HIS 209 ALA 210 LEU 211 ARG 212 ARG 213 ALA 214 TYR 215 LYS 216 VAL 217 VAL 218 TYR 219 ARG 220 GLN 221 GLY 222 HIS 223 THR 224 VAL 225 GLU 226 GLU 227 ALA 228 LEU 229 ALA 230 GLU 231 LEU 232 ALA 233 GLU 234 SER 235 ALA 236 ALA 237 GLN 238 PHE 239 PRO 240 GLU 241 VAL 242 ALA 243 VAL 244 PHE 245 ARG 246 ASP 247 SER 248 ILE 249 GLN 250 SER 251 ALA 252 THR 253 ARG 254 GLY 255 ILE 256 THR 257 ARG 258
Unit 3	LEU 3 ILE 4 ASP 5 PRO 6 ARG 7 ALA 8 ILE 9 ILE 10 ASP 11 PRO 12 SER 13 ALA 14 ARG 15 LEU 16 ALA 17 ALA 18 ASP 19 VAL 20 GLN 21 VAL 22 GLY 23 PRO 24 TRP 25 SER 26 ILE 27 VAL 28 GLY 29 ALA 30 GLU 31 VAL 32 GLU 33 ILE 34 GLY 35 GLU 36 GLY 37 THR 38 VAL 39 ILE 40 GLY 41 PRO 42 HIS 43 VAL 44 VAL 45 LEU 46 LYS 47 GLY 48 PRO 49 THR 50 LYS 51 ILE 52 GLY 53 LYS 54 HIS 55 ASN 56 ARG 57 ILE 58 TYR 59 GLN 60 PHE 61 SER 62 SER 63 VAL 64 GLY 65 GLU 66 ASP 67 THR 68 PRO 69 ASP 70 LEU 71 LYS 72 TYR 73 LYS 74 GLY 75 GLU 76 PRO 77 THR 78 ARG 79 LEU 80 VAL 81 ILE 82 GLY 83 ASP 84 HIS 85 ASN 86 VAL 87 ILE 88 ARG 89 GLU 90 GLY 91 VAL 92 THR 93 ILE 94 HIS 95 ARG 96 GLY 97 THR 98 VAL 99 GLN 100 ASP 101 ARG 102 ALA 103 GLU 104 THR 105 THR 106 ILE 107 GLY 108 ASP 109 HIS 110 ASN 111 LEU 112 ILE 113 MET 114 ALA 115 TYR 116 ALA 117 HIS 118 ILE 119 GLY 120 HIS 121 ASP 122 SER 123 VAL 124 ILE 125 GLY 126 ASN 127 HIS 128 CYS 129 ILE 130 LEU 131 VAL 132 ASN 133 ASN 134 THR 135 ALA 136 LEU 137 ALA 138 GLY 139 HIS 140 VAL 141 HIS 142 VAL 143 ASP 144 ASP 145 TRP 146 ALA 147 ILE 148 LEU 149 SER 150 GLY 151 TYR 152 THR 153 LEU 154 VAL 155 HIS 156 GLN 157 TYR 158 CYS 159 ARG 160 ILE 161 GLY 162 ALA 163 HIS 164 SER 165 PHE 166 SER 167 GLY 168 MET 169 GLY 170 SER 171 ALA 172 ILE 173 GLY 174 LYS 175 ASP 176 VAL 177 PRO 178 ALA 179 TYR 180 VAL 181 THR 182 VAL 183 PHE 184 GLY 185 ASN 186 PRO 187 ALA 188 GLU 189 ALA 190 ARG 191 SER 192 MET 193 ASN 194 PHE 195 GLU 196 GLY 197 MET 198 ARG 199 ARG 200 ARG 201 GLY 202 PHE 203 SER 204 SER 205 GLU 206 ALA 207 ILE 208 HIS 209 ALA 210 LEU 211 ARG 212 ARG 213 ALA 214 TYR 215 LYS 216 VAL 217 VAL 218 TYR 219 ARG 220 GLN 221 GLY 222 HIS 223 THR 224 VAL 225 GLU 226 GLU 227 ALA 228 LEU 229 ALA 230 GLU 231 LEU 232 ALA 233 GLU 234 SER 235 ALA 236 ALA 237 GLN 238 PHE 239 PRO 240 GLU 241 VAL 242 ALA 243 VAL 244 PHE 245 ARG 246 ASP 247 SER 248 ILE 249 GLN 250 SER 251 ALA 252 THR 253 ARG 254 GLY 255 ILE 256 THR 257 ARG 258
Unit 4	LEU 3 ILE 4 ASP 5 PRO 6 ARG 7 ALA 8 ILE 9 ILE 10 ASP 11 PRO 12 SER 13 ALA 14 ARG 15 LEU 16 ALA 17 ALA 18 ASP 19 VAL 20 GLN 21 VAL 22 GLY 23 PRO 24 TRP 25 SER 26 ILE 27 VAL 28 GLY 29 ALA 30 GLU 31 VAL 32 GLU 33 ILE 34 GLY 35 GLU 36 GLY 37 THR 38 VAL 39 ILE 40 GLY 41 PRO 42 HIS 43 VAL 44 VAL 45 LEU 46 LYS 47 GLY 48 PRO 49 THR 50 LYS 51 ILE 52 GLY 53 LYS 54 HIS 55 ASN 56 ARG 57 ILE 58 TYR 59 GLN 60 PHE 61 SER 62 SER 63 VAL 64 GLY 65 GLU 66 ASP 67 THR 68 PRO 69 PRO 77 THR 78 ARG 79 LEU 80 VAL 81 ILE 82 GLY 83 ASP 84 HIS 85 ASN 86 VAL 87 ILE 88 ARG 89 GLU 90 GLY 91 VAL 92 THR 93 ILE 94 HIS 95 ARG 96 GLY 97 THR 98 VAL 99 GLN 100 ASP 101 ARG 102 ALA 103 GLU 104 THR 105 THR 106 ILE 107 GLY 108 ASP 109 HIS 110 ASN 111 LEU 112 ILE 113 MET 114 ALA 115 TYR 116 ALA 117 HIS 118 ILE 119 GLY 120 HIS 121 ASP 122 SER 123 VAL 124 ILE 125 GLY 126 ASN 127 HIS 128 CYS 129 ILE 130 LEU 131 VAL 132 ASN 133 ASN 134 THR 135 ALA 136 LEU 137 ALA 138 GLY 139 HIS 140 VAL 141 HIS 142 VAL 143 ASP 144 ASP 145 TRP 146 ALA 147 ILE 148 LEU 149 SER 150 GLY 151 TYR 152 THR 153 LEU 154 VAL 155 HIS 156 GLN 157 TYR 158 CYS 159 ARG 160 ILE 161 GLY 162 ALA 163 HIS 164 SER 165 PHE 166 SER 167 GLY 168 MET 169 GLY 170 SER 171 ALA 172 ILE 173 GLY 174 LYS 175 ASP 176 VAL 177 PRO 178 ALA 179 TYR 180 VAL 181 THR 182 VAL 183 PHE 184 GLY 185 ASN 186 PRO 187 ALA 188 GLU 189 ALA 190 ARG 191 SER 192 MET 193 ASN 194 PHE 195 GLU 196 GLY 197 MET 198 ARG 199 ARG 200 ARG 201 GLY 202 PHE 203 SER 204 SER 205 GLU 206 ALA 207 ILE 208 HIS 209 ALA 210 LEU 211 ARG 212 ARG 213 ALA 214 TYR 215 LYS 216 VAL 217 VAL 218 TYR 219 ARG 220 GLN 221 GLY 222 HIS 223 THR 224 VAL 225 GLU 226 GLU 227 ALA 228 LEU 229 ALA 230 GLU 231 LEU 232 ALA 233 GLU 234 SER 235 ALA 236 ALA 237 GLN 238 PHE 239 PRO 240 GLU 241 VAL 242 ALA 243 VAL 244 PHE 245 ARG 246 ASP 247 SER 248 ILE 249 GLN 250 SER 251 ALA 252 THR 253 ARG 254 GLY 255 ILE 256 THR 257 ARG 258
Unit 5	LEU 3 ILE 4 ASP 5 PRO 6 ARG 7 ALA 8 ILE 9 ILE 10 ASP 11 PRO 12 SER 13 ALA 14 ARG 15 LEU 16 ALA 17 ALA 18 ASP 19 VAL 20 GLN 21 VAL 22 GLY 23 PRO 24 TRP 25 SER 26 ILE 27 VAL 28 GLY 29 ALA 30 GLU 31 VAL 32 GLU 33 ILE 34 GLY 35 GLU 36 GLY 37 THR 38 VAL 39 ILE 40 GLY 41 PRO 42 HIS 43 VAL 44 VAL 45 LEU 46 LYS 47 GLY 48 PRO 49 THR 50 LYS 51 ILE 52 GLY 53 LYS 54 HIS 55 ASN 56 ARG 57 ILE 58 TYR 59 GLN 60 PHE 61 SER 62 SER 63 VAL 64 GLY 65 GLU 66 ASP 67 THR 68 PRO 69 ASP 70 LEU 71 LYS 72 TYR 73 LYS 74 GLY 75 GLU 76 PRO 77 THR 78 ARG 79 LEU 80 VAL 81 ILE 82 GLY 83 ASP 84 HIS 85 ASN 86 VAL 87 ILE 88 ARG 89 GLU 90 GLY 91 VAL 92 THR 93 ILE 94 HIS 95 ARG 96 GLY 97 THR 98 VAL 99 GLN 100 ASP 101 ARG 102 ALA 103 GLU 104 THR 105 THR 106 ILE 107 GLY 108 ASP 109 HIS 110 ASN 111 LEU 112 ILE 113 MET 114 ALA 115 TYR 116 ALA 117 HIS 118 ILE 119 GLY 120 HIS 121 ASP 122 SER 123 VAL 124 ILE 125 GLY 126 ASN 127 HIS 128 CYS 129 ILE 130 LEU 131 VAL 132 ASN 133 ASN 134 THR 135 ALA 136 LEU 137 ALA 138 GLY 139 HIS 140 VAL 141 HIS 142 VAL 143 ASP 144 ASP 145 TRP 146 ALA 147 ILE 148 LEU 149 SER 150 GLY 151 TYR 152 THR 153 LEU 154 VAL 155 HIS 156 GLN 157 TYR 158 CYS 159 ARG 160 ILE 161 GLY 162 ALA 163 HIS 164 SER 165 PHE 166 SER 167 GLY 168 MET 169 GLY 170 SER 171 ALA 172 ILE 173 GLY 174 LYS 175 ASP 176 VAL 177 PRO 178 ALA 179 TYR 180 VAL 181 THR 182 VAL 183 PHE 184 GLY 185 ASN 186 PRO 187 ALA 188 GLU 189 ALA 190 ARG 191 SER 192 MET 193 ASN 194 PHE 195 GLU 196 GLY 197 MET 198 ARG 199 ARG 200 ARG 201 GLY 202 PHE 203 SER 204 SER 205 GLU 206 ALA 207 ILE 208 HIS 209 ALA 210 LEU 211 ARG 212 ARG 213 ALA 214 TYR 215 LYS 216 VAL 217 VAL 218 TYR 219 ARG 220 GLN 221 GLY 222 HIS 223 THR 224 VAL 225 GLU 226 GLU 227 ALA 228 LEU 229 ALA 230 GLU 231 LEU 232 ALA 233 GLU 234 SER 235 ALA 236 ALA 237 GLN 238 PHE 239 PRO 240 GLU 241 VAL 242 ALA 243 VAL 244 PHE 245 ARG 246 ASP 247 SER 248 ILE 249 GLN 250 SER 251 ALA 252 THR 253 ARG 254 GLY 255 ILE 256 THR 257 ARG 258
Unit 6	SER 2 LEU 3 ILE 4 ASP 5 PRO 6 ARG 7 ALA 8 ILE 9 ILE 10 ASP 11 PRO 12 SER 13 ALA 14 ARG 15 LEU 16 ALA 17 ALA 18 ASP 19 VAL 20 GLN 21 VAL 22 GLY 23 PRO 24 TRP 25 SER 26 ILE 27 VAL 28 GLY 29 ALA 30 GLU 31 VAL 32 GLU 33 ILE 34 GLY 35 GLU 36 GLY 37 THR 38 VAL 39 ILE 40 GLY 41 PRO 42 HIS 43 VAL 44 VAL 45 LEU 46 LYS 47 GLY 48 PRO 49 THR 50 LYS 51 ILE 52 GLY 53 LYS 54 HIS 55 ASN 56 ARG 57 ILE 58 TYR 59 GLN 60 PHE 61 SER 62 SER 63 VAL 64 GLY 65 GLU 66 ASP 67 THR 68 PRO 69 ASP 70 LEU 71 LYS 72 TYR 73 LYS 74 GLY 75 GLU 76 PRO 77 THR 78 ARG 79 LEU 80 VAL 81 ILE 82 GLY 83 ASP 84 HIS 85 ASN 86 VAL 87 ILE 88 ARG 89 GLU 90 GLY 91 VAL 92 THR 93 ILE 94 HIS 95 ARG 96 GLY 97 THR 98 VAL 99 GLN 100 ASP 101 ARG 102 ALA 103 GLU 104 THR 105 THR 106 ILE 107 GLY 108 ASP 109 HIS 110 ASN 111 LEU 112 ILE 113 MET 114 ALA 115 TYR 116 ALA 117 HIS 118 ILE 119 GLY 120 HIS 121 ASP 122 SER 123 VAL 124 ILE 125 GLY 126 ASN 127 HIS 128 CYS 129 ILE 130 LEU 131 VAL 132 ASN 133 ASN 134 THR 135 ALA 136 LEU 137 ALA 138 GLY 139 HIS 140 VAL 141 HIS 142 VAL 143 ASP 144 ASP 145 TRP 146 ALA 147 ILE 148 LEU 149 SER 150 GLY 151 TYR 152 THR 153 LEU 154 VAL 155 HIS 156 GLN 157 TYR 158 CYS 159 ARG 160 ILE 161 GLY 162 ALA 163 HIS 164 SER 165 PHE 166 SER 167 GLY 168 MET 169 GLY 170 SER 171 ALA 172 ILE 173 GLY 174 LYS 175 ASP 176 VAL 177 PRO 178 ALA 179 TYR 180 VAL 181 THR 182 VAL 183 PHE 184 GLY 185 ASN 186 PRO 187 ALA 188 GLU 189 ALA 190 ARG 191 SER 192 MET 193 ASN 194 PHE 195 GLU 196 GLY 197 MET 198 ARG 199 ARG 200 ARG 201 GLY 202 PHE 203 SER 204 SER 205 GLU 206 ALA 207 ILE 208 HIS 209 ALA 210 LEU 211 ARG 212 ARG 213 ALA 214 TYR 215 LYS 216 VAL 217 VAL 218 TYR 219 ARG 220 GLN 221 GLY 222 HIS 223 THR 224 VAL 225 GLU 226 GLU 227 ALA 228 LEU 229 ALA 230 GLU 231 LEU 232 ALA 233 GLU 234 SER 235 ALA 236 ALA 237 GLN 238 PHE 239 PRO 240 GLU 241 VAL 242 ALA 243 VAL 244 PHE 245 ARG 246 ASP 247 SER 248 ILE 249 GLN 250 SER 251 ALA 252 THR 253 ARG 254 GLY 255 ILE 256 THR 257 ARG 258

Ligands

Unit 7	U21 301
Unit 8	U21 301
Unit 9	U21 301
Unit 10	U21 301 PO4 302