5DEU - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF TET2-5HMC COMPLEX
• Keywords: 5-METHYLCYTOSINE DIOXYGENASE, TET2, 5HMC, PROTEIN-DNA COMPLE OXIDOREDUCTASE-DNA COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5DEU	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein		A	413	3252	0
2	Other macromolecule		B	12	224	21
3	Other macromolecule		C	11	206	21
4	Ligand		A	7	0	27
5	Water			309	0	309
total				752	3682	378

Proteins

Unit 1

SER 1132 CYS 1133 ARG 1134 CYS 1135 VAL 1136 GLU 1137 GLN 1138 ILE 1139 ILE 1140 GLU 1141 LYS 1142 ASP 1143 GLU 1144 GLY 1145 PRO 1146 PHE 1147 TYR 1148 THR 1149 HIS 1150 LEU 1151 GLY 1152 ALA 1153 GLY 1154 PRO 1155 ASN 1156 VAL 1157 ALA 1158 ALA 1159 ILE 1160 ARG 1161 GLU 1162 ILE 1163 MET 1164 GLU 1165 GLU 1166 ARG 1167 PHE 1168 GLY 1169 GLN 1170 LYS 1171 GLY 1172 LYS 1173 ALA 1174 ILE 1175 ARG 1176 ILE 1177 GLU 1178 ARG 1179 VAL 1180 ILE 1181 TYR 1182 THR 1183 GLY 1184 LYS 1185 GLU 1186 GLY 1187 LYS 1188 SER 1189 SER 1190 GLN 1191 GLY 1192 CYS 1193 PRO 1194 ILE 1195 ALA 1196 LYS 1197 TRP 1198 VAL 1199 VAL 1200 ARG 1201 ARG 1202 SER 1203 SER 1204 SER 1205 GLU 1206 GLU 1207 LYS 1208 LEU 1209 LEU 1210 CYS 1211 LEU 1212 VAL 1213 ARG 1214 GLU 1215 ARG 1216 ALA 1217 GLY 1218 HIS 1219 THR 1220 CYS 1221 GLU 1222 ALA 1223 ALA 1224 VAL 1225 ILE 1226 VAL 1227 ILE 1228 LEU 1229 ILE 1230 LEU 1231 VAL 1232 TRP 1233 GLU 1234 GLY 1235 ILE 1236 PRO 1237 LEU 1238 SER 1239 LEU 1240 ALA 1241 ASP 1242 LYS 1243 LEU 1244 TYR 1245 SER 1246 GLU 1247 LEU 1248 THR 1249 GLU 1250 THR 1251 LEU 1252 ARG 1253 LYS 1254 TYR 1255 GLY 1256 THR 1257 LEU 1258 THR 1259 ASN 1260 ARG 1261 ARG 1262 CYS 1263 ALA 1264 LEU 1265 ASN 1266 GLU 1267 GLU 1268 ARG 1269 THR 1270 CYS 1271 ALA 1272 CYS 1273 GLN 1274 GLY 1275 LEU 1276 ASP 1277 PRO 1278 GLU 1279 THR 1280 CYS 1281 GLY 1282 ALA 1283 SER 1284 PHE 1285 SER 1286 PHE 1287 GLY 1288 CYS 1289 SER 1290 TRP 1291 SER 1292 MET 1293 TYR 1294 TYR 1295 ASN 1296 GLY 1297 CYS 1298 LYS 1299 PHE 1300 ALA 1301 ARG 1302 SER 1303 LYS 1304 ILE 1305 PRO 1306 ARG 1307 LYS 1308 PHE 1309 LYS 1310 LEU 1311 LEU 1312 GLY 1313 ASP 1314 ASP 1315 PRO 1316 LYS 1317 GLU 1318 GLU 1319 GLU 1320 LYS 1321 LEU 1322 GLU 1323 SER 1324 HIS 1325 LEU 1326 GLN 1327 ASN 1328 LEU 1329 SER 1330 THR 1331 LEU 1332 MET 1333 ALA 1334 PRO 1335 THR 1336 TYR 1337 LYS 1338 LYS 1339 LEU 1340 ALA 1341 PRO 1342 ASP 1343 ALA 1344 TYR 1345 ASN 1346 ASN 1347 GLN 1348 ILE 1349 GLU 1350 TYR 1351 GLU 1352 HIS 1353 ARG 1354 ALA 1355 PRO 1356 GLU 1357 CYS 1358 ARG 1359 LEU 1360 GLY 1361 LEU 1362 LYS 1363 GLU 1364 GLY 1365 ARG 1366 PRO 1367 PHE 1368 SER 1369 GLY 1370 VAL 1371 THR 1372 ALA 1373 CYS 1374 LEU 1375 ASP 1376 PHE 1377 CYS 1378 ALA 1379 HIS 1380 ALA 1381 HIS 1382 ARG 1383 ASP 1384 LEU 1385 HIS 1386 ASN 1387 MET 1388 GLN 1389 ASN 1390 GLY 1391 SER 1392 THR 1393 LEU 1394 VAL 1395 CYS 1396 THR 1397 LEU 1398 THR 1399 ARG 1400 GLU 1401 ASP 1402 ASN 1403 ARG 1404 GLU 1405 PHE 1406 GLY 1407 GLY 1408 LYS 1409 PRO 1410 GLU 1411 ASP 1412 GLU 1413 GLN 1414 LEU 1415 HIS 1416 VAL 1417 LEU 1418 PRO 1419 LEU 1420 TYR 1421 LYS 1422 VAL 1423 SER 1424 ASP 1425 VAL 1426 ASP 1427 GLU 1428 PHE 1429 GLY 1430 SER 1431 VAL 1432 GLU 1433 ALA 1434 GLN 1435 GLU 1436 GLU 1437 LYS 1438 LYS 1439 ARG 1440 SER 1441 GLY 1442 ALA 1443 ILE 1444 GLN 1445 VAL 1446 LEU 1447 SER 1448 SER 1449 PHE 1450 ARG 1451 ARG 1452 LYS 1453 VAL 1454 ARG 1455 MET 1456 LEU 1457 ALA 1458 GLU 1459 PRO 1460 VAL 1461 LYS 1462 THR 1463 CYS 1464 GLY 1842 SER 1843 ASP 1844 GLU 1845 VAL 1846 TRP 1847 SER 1848 ASP 1849 SER 1850 GLU 1851 GLN 1852 SER 1853 PHE 1854 LEU 1855 ASP 1856 PRO 1857 ASP 1858 ILE 1859 GLY 1860 GLY 1861 VAL 1862 ALA 1863 VAL 1864 ALA 1865 PRO 1866 THR 1867 HIS 1868 GLY 1869 SER 1870 ILE 1871 LEU 1872 ILE 1873 GLU 1874 CYS 1875 ALA 1876 LYS 1877 ARG 1878 GLU 1879 LEU 1880 HIS 1881 ALA 1882 THR 1883 THR 1884 PRO 1885 LEU 1886 LYS 1887 ASN 1888 PRO 1889 ASN 1890 ARG 1891 ASN 1892 HIS 1893 PRO 1894 THR 1895 ARG 1896 ILE 1897 SER 1898 LEU 1899 VAL 1900 PHE 1901 TYR 1902 GLN 1903 HIS 1904 LYS 1905 SER 1906 MET 1907 ASN 1908 GLU 1909 PRO 1910 LYS 1911 HIS 1912 GLY 1913 LEU 1914 ALA 1915 LEU 1916 TRP 1917 GLU 1918 ALA 1919 LYS 1920 MET 1921

Other macromolecules

Unit 2	DA 1 DC 2 DC 3 DA 4 DC 5 5HC 6 DG 7 DG 8 DT 9 DG 10 DG 11 DT 12
Unit 3	DC 2 DC 3 DA 4 DC 5 5HC 6 DG 7 DG 8 DT 9 DG 10 DG 11 DT 12

Ligands

Unit 4

OGA 2001 MES 2002 FE 2003 ZN 2004 ZN 2005 ZN 2006 CL 2007