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Sequence, Chains, Asymmetric and Biological Units

Title RNA OLIGONUCLEOTIDE CONTAINING (R)-C5'-ME-2'F U
Keywords RNA, OLIGONUCLEOTIDE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5DER     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 8 147 21
2  RNA    B 8 147 21
3  RNA    C 8 147 21
4  RNA    D 8 147 21
5 Water     194 0 194
total       226 588 278
Nucleic acids
Unit 1 C101 G102 A103 A104 U5R105 U106 C107 G108
Unit 2 C209 G210 A211 A212 U5R213 U214 C215 G216
Unit 3 C101 G102 A103 A104 U5R105 U106 C107 G108
Unit 4 C209 G210 A211 A212 U5R213 U214 C215 G216
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany