5DDR - Sequence, Chains, Asymmetric and Biological Units

• Title: L-GLUTAMINE RIBOSWITCH BOUND WITH L-GLUTAMINE SOAKED WITH CS
• Keywords: RIBOSWITCH, L-GLUTAMINE, BOUND-FORM, RNA, RNA BINDING PROTEI COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5DDR	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	RNA		A	61	1307	0
2	RNA		B	61	1307	0
3	Protein	U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A	C	94	752	0
4	Protein	U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A	D	94	757	0
5	Protein	L-GLUTAMINE RIBOSWITCH RNA (61-MER)	A	14	0	23
6	Protein	L-GLUTAMINE RIBOSWITCH RNA (61-MER)	B	16	0	25
7	Ligand	U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A	C	1	0	1
8	Water			247	0	247
total				588	4123	296

Proteins

Unit 3	VAL 2 PRO 3 GLU 4 THR 5 ARG 6 PRO 7 ASN 8 HIS 9 THR 10 ILE 11 TYR 12 ILE 13 ASN 14 ASN 15 LEU 16 ASN 17 GLU 18 LYS 19 ILE 20 LYS 21 LYS 22 ASP 23 GLU 24 LEU 25 LYS 26 LYS 27 SER 28 LEU 29 HIS 30 ALA 31 ILE 32 PHE 33 SER 34 ARG 35 PHE 36 GLY 37 GLN 38 ILE 39 LEU 40 ASP 41 ILE 42 LEU 43 VAL 44 SER 45 ARG 46 SER 47 LEU 48 LYS 49 MET 50 ARG 51 GLY 52 GLN 53 ALA 54 PHE 55 VAL 56 ILE 57 PHE 58 LYS 59 GLU 60 VAL 61 SER 62 SER 63 ALA 64 THR 65 ASN 66 ALA 67 LEU 68 ARG 69 SER 70 MET 71 GLN 72 GLY 73 PHE 74 PRO 75 PHE 76 TYR 77 ASP 78 LYS 79 PRO 80 MET 81 ARG 82 ILE 83 GLN 84 TYR 85 ALA 86 LYS 87 THR 88 ASP 89 SER 90 ASP 91 ILE 92 ILE 93 ALA 94 LYS 95
Unit 4	GLU 4 THR 5 ARG 6 PRO 7 ASN 8 HIS 9 THR 10 ILE 11 TYR 12 ILE 13 ASN 14 ASN 15 LEU 16 ASN 17 GLU 18 LYS 19 ILE 20 LYS 21 LYS 22 ASP 23 GLU 24 LEU 25 LYS 26 LYS 27 SER 28 LEU 29 HIS 30 ALA 31 ILE 32 PHE 33 SER 34 ARG 35 PHE 36 GLY 37 GLN 38 ILE 39 LEU 40 ASP 41 ILE 42 LEU 43 VAL 44 SER 45 ARG 46 SER 47 LEU 48 LYS 49 MET 50 ARG 51 GLY 52 GLN 53 ALA 54 PHE 55 VAL 56 ILE 57 PHE 58 LYS 59 GLU 60 VAL 61 SER 62 SER 63 ALA 64 THR 65 ASN 66 ALA 67 LEU 68 ARG 69 SER 70 MET 71 GLN 72 GLY 73 PHE 74 PRO 75 PHE 76 TYR 77 ASP 78 LYS 79 PRO 80 MET 81 ARG 82 ILE 83 GLN 84 TYR 85 ALA 86 LYS 87 THR 88 ASP 89 SER 90 ASP 91 ILE 92 ILE 93 ALA 94 LYS 95 MET 96 LYS 97
Unit 5	GLN 101 K 102 K 103 K 104 K 105 MG 106 MG 107 MG 108 MG 109 MG 110 MG 111 CS 112 CS 113 CS 114
Unit 6	GLN 101 K 102 K 103 K 104 MG 105 MG 106 MG 107 MG 108 NA 109 NA 110 NA 111 NA 112 CS 113 CS 114 CS 115 CS 116

Nucleic acids

Unit 1	C 1 G 2 U 3 U 4 G 5 A 6 C 7 C 8 C 9 A 10 G 11 G 12 A 13 A 14 A 15 C 16 U 17 G 18 G 19 G 20 C 21 G 22 G 23 A 24 A 25 G 26 U 27 A 28 A 29 G 30 G 31 U 32 C 33 C 34 A 35 U 36 U 37 G 38 C 39 A 40 C 41 U 42 C 43 C 44 G 45 G 46 G 47 C 48 C 49 U 50 G 51 A 52 A 53 G 54 C 55 A 56 A 57 C 58 G 59 C 60 G 61
Unit 2	C 1 G 2 U 3 U 4 G 5 A 6 C 7 C 8 C 9 A 10 G 11 G 12 A 13 A 14 A 15 C 16 U 17 G 18 G 19 G 20 C 21 G 22 G 23 A 24 A 25 G 26 U 27 A 28 A 29 G 30 G 31 U 32 C 33 C 34 A 35 U 36 U 37 G 38 C 39 A 40 C 41 U 42 C 43 C 44 G 45 G 46 G 47 C 48 C 49 U 50 G 51 A 52 A 53 G 54 C 55 A 56 A 57 C 58 G 59 C 60 G 61

Ligands

Unit 7

MG 101