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Sequence, Chains, Asymmetric and Biological Units

Title ATOMIC RESOLUTION CRYSTAL STRUCTURE OF DOUBLE-STRANDED RNA 3 PAIRS LONG DETERMINED FROM RANDOM STARTING PHASES ANGLES IN PRESENCE OF PSEUDO TRANSLATIONAL SYMMETRY USING THE DIRECT PROGRAM SIR2014.
Keywords RNA EDITING SUBSTRATE, DOUBLE-STRANDED RNA, DIRECT METHODS S DETERMINATION, PSEUDO TRANSLATIONAL SYMMETRY, RNA
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5DA6     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 32 1012 0
2  Ligand   RNA (32-MER)  A 1 0 1
3 Water     236 0 236
total       269 1012 237

Nucleic acids
Unit 1 A1 G2 A3 G4 A5 A6 G7 A8 A9 A10 G11 G12 G13 A14 A15 A16 U17 U18 U19 U20 U21 U22 U23 U24 U25 U26 U27 U28 U29 U30 U31 U32

Ligands
Unit 2 K101

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany