5D8J - Sequence, Chains, Asymmetric and Biological Units

• Title: DEVELOPMENT OF A THERAPEUTIC MONOCLONAL ANTIBODY TARGETING S AP2 TO TREAT TYPE 2 DIABETES.
• Keywords: AP2, FABP4, DIABETES, METABOLIC SYNDROME, IMMUNE SYSTEM
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5D8J	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	FATTY ACID-BINDING PROTEIN, ADIPOCYTE	A	133	1031	0
2	Protein	HA3 FAB HEAVY CHAIN	H	216	1635	0
3	Protein	HA3 FAB LIGHT CHAIN	L	214	1642	0
4	Ligand	FATTY ACID-BINDING PROTEIN, ADIPOCYTE	A	1	0	5
5	Water			13	0	13
total				577	4308	18

Proteins

Unit 1	SER 0 MET 1 CYS 2 ASP 3 ALA 4 PHE 5 VAL 6 GLY 7 THR 8 TRP 9 LYS 10 LEU 11 VAL 12 SER 13 SER 14 GLU 15 ASN 16 PHE 17 ASP 18 ASP 19 TYR 20 MET 21 LYS 22 GLU 23 VAL 24 GLY 25 VAL 26 GLY 27 PHE 28 ALA 29 THR 30 ARG 31 LYS 32 VAL 33 ALA 34 GLY 35 MET 36 ALA 37 LYS 38 PRO 39 ASN 40 MET 41 ILE 42 ILE 43 SER 44 VAL 45 ASN 46 GLY 47 ASP 48 LEU 49 VAL 50 THR 51 ILE 52 ARG 53 SER 54 GLU 55 SER 56 THR 57 PHE 58 LYS 59 ASN 60 THR 61 GLU 62 ILE 63 SER 64 PHE 65 LYS 66 LEU 67 GLY 68 VAL 69 GLU 70 PHE 71 ASP 72 GLU 73 ILE 74 THR 75 ALA 76 ASP 77 ASP 78 ARG 79 LYS 80 VAL 81 LYS 82 SER 83 ILE 84 ILE 85 THR 86 LEU 87 ASP 88 GLY 89 GLY 90 ALA 91 LEU 92 VAL 93 GLN 94 VAL 95 GLN 96 LYS 97 TRP 98 ASP 99 GLY 100 LYS 101 SER 102 THR 103 THR 104 ILE 105 LYS 106 ARG 107 LYS 108 ARG 109 ASP 110 GLY 111 ASP 112 LYS 113 LEU 114 VAL 115 VAL 116 GLU 117 CYS 118 VAL 119 MET 120 LYS 121 GLY 122 VAL 123 THR 124 SER 125 THR 126 ARG 127 VAL 128 TYR 129 GLU 130 ARG 131 ALA 132
Unit 2	GLN 1 VAL 2 GLN 3 LEU 4 GLN 5 GLN 6 PRO 7 GLY 8 ALA 9 GLU 10 LEU 11 VAL 12 LYS 13 PRO 14 GLY 15 ALA 16 SER 17 VAL 18 LYS 19 LEU 20 SER 21 CYS 22 LYS 23 ALA 24 SER 25 GLY 26 TYR 27 THR 28 PHE 29 THR 30 SER 31 ASN 32 TRP 33 ILE 34 THR 35 TRP 36 VAL 37 LYS 38 GLN 39 ARG 40 PRO 41 GLY 42 GLN 43 GLY 44 LEU 45 GLU 46 TRP 47 ILE 48 GLY 49 ASP 50 ILE 51 TYR 52 PRO 53 GLY 54 SER 55 GLY 56 SER 57 THR 58 THR 59 ASN 60 ASN 61 GLU 62 LYS 63 PHE 64 LYS 65 SER 66 LYS 67 ALA 68 THR 69 LEU 70 THR 71 VAL 72 ASP 73 THR 74 SER 75 SER 76 SER 77 THR 78 ALA 79 TYR 80 MET 81 GLN 82 LEU 83 SER 84 SER 85 LEU 86 THR 87 SER 88 GLU 89 ASP 90 SER 91 ALA 92 VAL 93 TYR 94 TYR 95 CYS 96 ALA 97 ARG 98 LEU 99 ARG 100 GLY 101 TYR 102 TYR 103 ASP 104 TYR 105 PHE 106 ASP 107 PHE 108 TRP 109 GLY 110 GLN 111 GLY 112 THR 113 THR 114 LEU 115 THR 116 VAL 117 SER 118 SER 119 ALA 120 LYS 121 THR 122 THR 123 PRO 124 PRO 125 SER 126 VAL 127 TYR 128 PRO 129 LEU 130 ALA 131 PRO 132 GLY 133 THR 138 ASN 139 SER 140 MET 141 VAL 142 THR 143 LEU 144 GLY 145 CYS 146 LEU 147 VAL 148 LYS 149 GLY 150 TYR 151 PHE 152 PRO 153 GLU 154 PRO 155 VAL 156 THR 157 VAL 158 THR 159 TRP 160 ASN 161 SER 162 GLY 163 SER 164 LEU 165 SER 166 SER 167 GLY 168 VAL 169 HIS 170 THR 171 PHE 172 PRO 173 ALA 174 VAL 175 LEU 176 GLN 177 SER 178 ASP 179 LEU 180 TYR 181 THR 182 LEU 183 SER 184 SER 185 SER 186 VAL 187 THR 188 VAL 189 PRO 190 SER 191 SER 192 THR 193 TRP 194 PRO 195 SER 196 GLU 197 THR 198 VAL 199 THR 200 CYS 201 ASN 202 VAL 203 ALA 204 HIS 205 PRO 206 ALA 207 SER 208 SER 209 THR 210 LYS 211 VAL 212 ASP 213 LYS 214 LYS 215 ILE 216 VAL 217 PRO 218 ARG 219 ASP 220
Unit 3	GLU 1 VAL 2 VAL 3 LEU 4 THR 5 GLN 6 SER 7 PRO 8 ALA 9 LEU 10 MET 11 ALA 12 ALA 13 SER 14 PRO 15 GLY 16 GLU 17 LYS 18 VAL 19 THR 20 ILE 21 THR 22 CYS 23 SER 24 VAL 25 SER 26 SER 27 SER 28 ILE 29 SER 30 SER 31 SER 32 ASN 33 LEU 34 HIS 35 TRP 36 TYR 37 GLN 38 GLN 39 LYS 40 SER 41 GLU 42 THR 43 SER 44 PRO 45 LYS 46 PRO 47 TRP 48 ILE 49 TYR 50 GLY 51 THR 52 SER 53 ASN 54 LEU 55 ALA 56 SER 57 GLY 58 VAL 59 PRO 60 VAL 61 ARG 62 PHE 63 SER 64 GLY 65 SER 66 GLY 67 SER 68 GLY 69 THR 70 SER 71 TYR 72 SER 73 LEU 74 THR 75 ILE 76 SER 77 SER 78 MET 79 GLU 80 ALA 81 GLU 82 ASP 83 ALA 84 ALA 85 THR 86 TYR 87 TYR 88 CYS 89 GLN 90 GLN 91 TRP 92 SER 93 HIS 94 TYR 95 PRO 96 LEU 97 THR 98 PHE 99 GLY 100 ALA 101 GLY 102 THR 103 LYS 104 LEU 105 GLU 106 LEU 107 LYS 108 ARG 109 THR 110 ASP 111 ALA 112 ALA 113 PRO 114 THR 115 VAL 116 SER 117 ILE 118 PHE 119 PRO 120 PRO 121 SER 122 SER 123 GLU 124 GLN 125 LEU 126 THR 127 SER 128 GLY 129 GLY 130 ALA 131 SER 132 VAL 133 VAL 134 CYS 135 PHE 136 LEU 137 ASN 138 ASN 139 PHE 140 TYR 141 PRO 142 LYS 143 ASP 144 ILE 145 ASN 146 VAL 147 LYS 148 TRP 149 LYS 150 ILE 151 ASP 152 GLY 153 SER 154 GLU 155 ARG 156 GLN 157 ASN 158 GLY 159 VAL 160 LEU 161 ASN 162 SER 163 TRP 164 THR 165 ASP 166 GLN 167 ASP 168 SER 169 LYS 170 ASP 171 SER 172 THR 173 TYR 174 SER 175 MET 176 SER 177 SER 178 THR 179 LEU 180 THR 181 LEU 182 THR 183 LYS 184 ASP 185 GLU 186 TYR 187 GLU 188 ARG 189 HIS 190 ASN 191 SER 192 TYR 193 THR 194 CYS 195 GLU 196 ALA 197 THR 198 HIS 199 LYS 200 THR 201 SER 202 THR 203 SER 204 PRO 205 ILE 206 VAL 207 LYS 208 SER 209 PHE 210 ASN 211 ARG 212 ASN 213 GLU 214

Ligands

Unit 4

SO4 201