5D8A - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF RECOMBINANT FOOT-AND-MOUTH-DISEASE VIRU H2093F EMPTY CAPSID
• Keywords: FOOT AND MOUTH DISEASE VIRUS, VIRUS, PICORNAVIRUS, VACCINE, APHTHOVIRUS
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5D8A	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	VP1	A	190	1481	0
2	Protein	VP2	B	207	1650	0
3	Protein	VP3	C	221	1707	0
4	Protein	VP4	D	45	349	0
5	Water			196	0	196
total				859	5187	196

Proteins

Unit 1	THR 1 THR 2 THR 3 THR 4 GLY 5 GLU 6 SER 7 ALA 8 ASP 9 PRO 10 VAL 11 THR 12 THR 13 THR 14 VAL 15 GLU 16 ASN 17 TYR 18 GLY 19 GLY 20 GLU 21 THR 22 GLN 23 VAL 24 GLN 25 ARG 26 ARG 27 GLN 28 HIS 29 THR 30 ASP 31 VAL 32 THR 33 PHE 34 ILE 35 MET 36 ASP 37 ARG 38 PHE 39 VAL 40 LYS 41 ILE 42 GLN 43 ASN 44 LEU 45 ASN 46 PRO 47 THR 48 HIS 49 VAL 50 ILE 51 ASP 52 LEU 53 MET 54 GLN 55 THR 56 HIS 57 GLN 58 HIS 59 GLY 60 LEU 61 VAL 62 GLY 63 ALA 64 LEU 65 LEU 66 ARG 67 ALA 68 ALA 69 THR 70 TYR 71 TYR 72 PHE 73 SER 74 ASP 75 LEU 76 GLU 77 ILE 78 VAL 79 VAL 80 ARG 81 HIS 82 ASP 83 GLY 84 ASN 85 LEU 86 THR 87 TRP 88 VAL 89 PRO 90 ASN 91 GLY 92 ALA 93 PRO 94 GLU 95 ALA 96 ALA 97 LEU 98 SER 99 ASN 100 THR 101 GLY 102 ASN 103 PRO 104 THR 105 ALA 106 TYR 107 LEU 108 LYS 109 ALA 110 PRO 111 PHE 112 THR 113 ARG 114 LEU 115 ALA 116 LEU 117 PRO 118 TYR 119 THR 120 ALA 121 PRO 122 HIS 123 ARG 124 VAL 125 LEU 126 ALA 127 THR 128 VAL 129 TYR 130 ASN 131 GLY 132 THR 133 SER 134 LYS 135 ALA 156 GLN 157 LEU 158 PRO 159 ALA 160 SER 161 PHE 162 ASN 163 PHE 164 GLY 165 ALA 166 ILE 167 GLN 168 ALA 169 THR 170 THR 171 ILE 172 HIS 173 GLU 174 LEU 175 LEU 176 VAL 177 ARG 178 MET 179 LYS 180 ARG 181 ALA 182 GLU 183 LEU 184 TYR 185 CYS 186 PRO 187 ARG 188 PRO 189 LEU 190 LEU 191 ALA 192 VAL 193 GLU 194 VAL 195 SER 196 SER 197 GLN 198 ASP 199 ARG 200 HIS 201 LYS 202 GLN 203 LYS 204 ILE 205 ILE 206 ALA 207 PRO 208 ALA 209 LYS 210
Unit 2	ASP 12 ARG 13 ILE 14 LEU 15 THR 16 THR 17 ARG 18 ASN 19 GLY 20 HIS 21 THR 22 THR 23 SER 24 THR 25 THR 26 GLN 27 SER 28 SER 29 VAL 30 GLY 31 VAL 32 THR 33 TYR 34 GLY 35 TYR 36 SER 37 THR 38 GLN 39 GLU 40 ASP 41 HIS 42 VAL 43 SER 44 GLY 45 PRO 46 ASN 47 THR 48 SER 49 GLY 50 LEU 51 GLU 52 THR 53 ARG 54 VAL 55 VAL 56 GLN 57 ALA 58 GLU 59 ARG 60 PHE 61 PHE 62 LYS 63 LYS 64 HIS 65 LEU 66 PHE 67 ASP 68 TRP 69 THR 70 PRO 71 ASP 72 LYS 73 ALA 74 PHE 75 GLY 76 HIS 77 LEU 78 GLU 79 LYS 80 LEU 81 GLU 82 LEU 83 PRO 84 THR 85 ASP 86 HIS 87 LYS 88 GLY 89 VAL 90 TYR 91 GLY 92 PHE 93 LEU 94 VAL 95 ASP 96 SER 97 PHE 98 ALA 99 TYR 100 MET 101 ARG 102 ASN 103 GLY 104 TRP 105 ASP 106 VAL 107 GLU 108 VAL 109 SER 110 ALA 111 VAL 112 GLY 113 ASN 114 GLN 115 PHE 116 ASN 117 GLY 118 GLY 119 CYS 120 LEU 121 LEU 122 VAL 123 ALA 124 MET 125 VAL 126 PRO 127 GLU 128 TRP 129 LYS 130 GLU 131 PHE 132 THR 133 PRO 134 ARG 135 GLU 136 LYS 137 TYR 138 GLN 139 LEU 140 THR 141 LEU 142 PHE 143 PRO 144 HIS 145 GLN 146 PHE 147 ILE 148 SER 149 PRO 150 ARG 151 THR 152 ASN 153 MET 154 THR 155 ALA 156 HIS 157 ILE 158 VAL 159 VAL 160 PRO 161 TYR 162 LEU 163 GLY 164 VAL 165 ASN 166 ARG 167 TYR 168 ASP 169 GLN 170 TYR 171 LYS 172 LYS 173 HIS 174 LYS 175 PRO 176 TRP 177 THR 178 LEU 179 VAL 180 VAL 181 MET 182 VAL 183 VAL 184 SER 185 PRO 186 LEU 187 THR 188 THR 189 ASN 190 THR 191 VAL 192 SER 193 ALA 194 GLY 195 GLN 196 ILE 197 LYS 198 VAL 199 TYR 200 ALA 201 ASN 202 ILE 203 ALA 204 PRO 205 THR 206 HIS 207 VAL 208 HIS 209 VAL 210 ALA 211 GLY 212 GLU 213 LEU 214 PRO 215 SER 216 LYS 217 GLU 218
Unit 3	GLY 1 ILE 2 VAL 3 PRO 4 VAL 5 ALA 6 CYS 7 SER 8 ASP 9 GLY 10 TYR 11 GLY 12 GLY 13 LEU 14 VAL 15 THR 16 THR 17 ASP 18 PRO 19 LYS 20 THR 21 ALA 22 ASP 23 PRO 24 VAL 25 TYR 26 GLY 27 MET 28 VAL 29 TYR 30 ASN 31 PRO 32 PRO 33 ARG 34 THR 35 ASN 36 TYR 37 PRO 38 GLY 39 ARG 40 PHE 41 THR 42 ASN 43 LEU 44 LEU 45 ASP 46 VAL 47 ALA 48 GLU 49 ALA 50 CYS 51 PRO 52 THR 53 PHE 54 LEU 55 CYS 56 PHE 57 ASP 58 GLU 59 GLY 60 LYS 61 PRO 62 TYR 63 VAL 64 VAL 65 THR 66 ARG 67 THR 68 ASP 69 GLU 70 GLN 71 ARG 72 LEU 73 LEU 74 ALA 75 LYS 76 PHE 77 ASP 78 VAL 79 SER 80 LEU 81 ALA 82 ALA 83 LYS 84 HIS 85 MET 86 SER 87 ASN 88 THR 89 TYR 90 LEU 91 SER 92 GLY 93 ILE 94 ALA 95 GLN 96 TYR 97 TYR 98 ALA 99 GLN 100 TYR 101 SER 102 GLY 103 THR 104 ILE 105 ASN 106 LEU 107 HIS 108 PHE 109 MET 110 PHE 111 THR 112 GLY 113 SER 114 THR 115 ASP 116 SER 117 LYS 118 ALA 119 ARG 120 TYR 121 MET 122 VAL 123 ALA 124 TYR 125 VAL 126 PRO 127 PRO 128 GLY 129 VAL 130 GLU 131 THR 132 PRO 133 PRO 134 ASP 135 THR 136 PRO 137 GLU 138 LYS 139 ALA 140 ALA 141 HIS 142 CYS 143 ILE 144 HIS 145 ALA 146 GLU 147 TRP 148 ASP 149 THR 150 GLY 151 LEU 152 ASN 153 SER 154 LYS 155 PHE 156 THR 157 PHE 158 SER 159 ILE 160 PRO 161 TYR 162 VAL 163 SER 164 ALA 165 ALA 166 ASP 167 TYR 168 ALA 169 TYR 170 THR 171 ALA 172 SER 173 ASP 174 VAL 175 ALA 176 GLU 177 THR 178 THR 179 ASN 180 VAL 181 GLN 182 GLY 183 TRP 184 VAL 185 CYS 186 ILE 187 TYR 188 GLN 189 ILE 190 THR 191 HIS 192 GLY 193 LYS 194 ALA 195 GLU 196 GLN 197 ASP 198 THR 199 LEU 200 VAL 201 VAL 202 SER 203 VAL 204 SER 205 ALA 206 GLY 207 LYS 208 ASP 209 PHE 210 GLU 211 LEU 212 ARG 213 LEU 214 PRO 215 ILE 216 ASP 217 PRO 218 ARG 219 SER 220 GLN 221
Unit 4	SER 15 GLY 16 ASN 17 THR 18 GLY 19 SER 20 ILE 21 ILE 22 ASN 23 ASN 24 TYR 25 TYR 26 MET 27 GLN 28 GLN 29 TYR 30 GLN 31 ASN 32 SER 33 MET 34 ASP 35 THR 36 GLN 37 LEU 38 ASN 65 ASP 66 TRP 67 PHE 68 SER 69 LYS 70 LEU 71 ALA 72 SER 73 SER 74 ALA 75 PHE 76 SER 77 GLY 78 LEU 79 PHE 80 GLY 81 ALA 82 LEU 83 LEU 84 ALA 85