5D88 - Sequence, Chains, Asymmetric and Biological Units

• Title: THE STRUCTURE OF THE U32 PEPTIDASE MK0906
• Keywords: U32 PEPTIDASE, TIM BARREL, HYDROLASE
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5D88	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	PREDICTED PROTEASE OF THE COLLAGENASE FAMILY	A	247	3801	0
2	Ligand	PREDICTED PROTEASE OF THE COLLAGENASE FAMILY	A	2	0	8
3	Water			161	0	161
total				410	3801	169

Proteins

Unit 1

GLY -20 SER -19 TRP -18 SER -17 HIS -16 PRO -15 GLN -14 PHE -13 GLU -12 LYS -11 SER -10 GLY -2 SER -1 MET 1 THR 2 ARG 3 ARG 4 TRP 5 TYR 6 LEU 7 CYS 8 CYS 9 SER 10 ARG 11 HIS 12 HIS 13 LEU 14 ASP 15 THR 16 VAL 17 PRO 18 GLU 19 ASP 20 SER 21 ASP 22 GLY 23 ILE 24 VAL 25 VAL 26 PRO 27 VAL 28 THR 29 GLU 30 HIS 31 GLY 32 VAL 33 ALA 34 THR 35 LEU 36 LEU 37 PRO 38 ARG 39 TYR 40 PRO 41 GLU 42 THR 43 TYR 44 GLU 45 VAL 46 GLU 47 ASP 48 ILE 49 VAL 50 ASP 51 VAL 52 ALA 53 LYS 54 ASP 55 ARG 56 GLY 57 LEU 58 SER 59 VAL 60 GLN 61 ALA 62 LEU 63 MET 64 ASP 65 PHE 66 THR 67 CYS 68 ALA 69 GLY 70 CYS 71 GLU 72 HIS 73 LEU 74 SER 75 PRO 76 ASP 77 GLY 78 TYR 79 PRO 80 SER 81 LEU 82 ARG 83 SER 84 THR 85 LEU 86 ASP 87 TYR 88 LEU 89 ALA 90 SER 91 ASP 92 LEU 93 GLU 94 VAL 95 ASP 96 GLY 97 VAL 98 VAL 99 VAL 100 ALA 101 ASP 102 PRO 103 TYR 104 LEU 105 VAL 106 GLU 107 VAL 108 LEU 109 ALA 110 THR 111 GLU 112 TYR 113 ASP 114 LEU 115 THR 116 VAL 117 VAL 118 VAL 119 SER 120 HIS 121 THR 122 ALA 123 ALA 124 VAL 125 ASP 126 THR 127 PRO 128 GLU 129 LYS 130 ALA 131 TRP 132 HIS 133 PHE 134 GLU 135 ARG 136 LEU 137 GLY 138 ALA 139 ASP 140 VAL 141 ILE 142 THR 143 VAL 144 ASP 145 PRO 146 ALA 147 LEU 148 ASN 149 SER 150 ASN 151 GLU 152 GLU 153 GLU 154 VAL 155 SER 156 ALA 157 ILE 158 ARG 159 GLU 160 ARG 161 VAL 162 SER 163 VAL 164 GLU 165 LEU 166 ARG 167 THR 168 ALA 169 VAL 170 GLY 171 ALA 172 ILE 173 THR 174 PHE 175 ARG 176 ASP 177 PRO 178 VAL 179 ALA 180 PHE 181 PHE 182 GLU 183 ARG 184 ASN 185 LEU 186 PHE 187 SER 188 HIS 189 ALA 190 THR 191 ALA 192 GLU 193 GLY 194 ILE 195 GLU 196 VAL 197 ASP 198 PRO 199 TYR 200 ARG 201 ASN 202 ASN 203 PRO 204 TYR 205 GLU 206 PRO 207 MET 208 ARG 209 GLU 210 ARG 211 VAL 212 VAL 213 VAL 214 TRP 215 GLU 216 VAL 217 ARG 218 GLU 219 GLU 220 LEU 221 PHE 222 ASP 223 GLU 224 VAL 225 PHE 226 ILE 227 LEU 228 ALA 229 SER 230 GLY 231 GLU 232 PRO 233 PRO 234

Ligands

Unit 2

ZN 301 ACT 302