5D6Q - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF THE ATP BINDING DOMAIN OF S. AUREUS GYR COMPLEXED WITH A LIGAND
• Keywords: DNA GYRASE, GYRB, LIGAND, STRUCTURE-BASED DESIGN, ISOMERASE- INHIBITOR COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5D6Q	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	DNA GYRASE SUBUNIT B	A	192	1547	0
2	Protein	DNA GYRASE SUBUNIT B	B	186	1499	0
3	Ligand	DNA GYRASE SUBUNIT B	A	2	0	16
4	Ligand	DNA GYRASE SUBUNIT B	B	5	0	42
5	Water			361	0	361
total				746	3046	419

Proteins

Unit 1

ALA 16 GLY 17 GLN 18 ILE 19 GLN 20 VAL 21 LEU 22 GLU 23 GLY 24 LEU 25 GLU 26 ALA 27 VAL 28 ARG 29 LYS 30 ARG 31 PRO 32 GLY 33 MET 34 TYR 35 ILE 36 GLY 37 SER 38 THR 39 SER 40 GLU 41 ARG 42 GLY 43 LEU 44 HIS 45 HIS 46 LEU 47 VAL 48 TRP 49 GLU 50 ILE 51 VAL 52 ASP 53 ASN 54 SER 55 ILE 56 ASP 57 GLU 58 ALA 59 LEU 60 ALA 61 GLY 62 TYR 63 ALA 64 ASN 65 GLN 66 ILE 67 GLU 68 VAL 69 VAL 70 ILE 71 GLU 72 LYS 73 ASP 74 ASN 75 TRP 76 ILE 77 LYS 78 VAL 79 THR 80 ASP 81 ASN 82 GLY 83 ARG 84 GLY 85 ILE 86 PRO 87 VAL 88 ASP 89 ILE 90 GLN 91 GLU 92 LYS 93 MET 94 GLY 95 ARG 96 PRO 97 ALA 98 VAL 99 GLU 100 VAL 101 ILE 102 LEU 103 THR 104 SER 128 SER 129 VAL 130 VAL 131 ASN 132 ALA 133 LEU 134 SER 135 GLN 136 ASP 137 LEU 138 GLU 139 VAL 140 TYR 141 VAL 142 HIS 143 ARG 144 ASN 145 GLU 146 THR 147 ILE 148 TYR 149 HIS 150 GLN 151 ALA 152 TYR 153 LYS 154 LYS 155 GLY 156 VAL 157 PRO 158 GLN 159 PHE 160 ASP 161 LEU 162 LYS 163 GLU 164 VAL 165 GLY 166 THR 167 THR 168 ASP 169 LYS 170 THR 171 GLY 172 THR 173 VAL 174 ILE 175 ARG 176 PHE 177 LYS 178 ALA 179 ASP 180 GLY 181 GLU 182 ILE 183 PHE 184 THR 185 GLU 186 THR 187 THR 188 VAL 189 TYR 190 ASN 191 TYR 192 GLU 193 THR 194 LEU 195 GLN 196 GLN 197 ARG 198 ILE 199 ARG 200 GLU 201 LEU 202 ALA 203 PHE 204 LEU 205 ASN 206 LYS 207 GLY 208 ILE 209 GLN 210 ILE 211 THR 212 LEU 213 ARG 214 ASP 215 GLU 216 ARG 217 ASP 218 GLU 219 GLU 220 ASN 221 VAL 222 ARG 223 GLU 224 ASP 225 SER 226 TYR 227 HIS 228 TYR 229 GLU 230

Unit 2

GLN 20 VAL 21 LEU 22 GLU 23 GLY 24 LEU 25 GLU 26 ALA 27 VAL 28 ARG 29 LYS 30 ARG 31 PRO 32 GLY 33 MET 34 TYR 35 ILE 36 GLY 37 SER 38 THR 39 SER 40 GLU 41 ARG 42 GLY 43 LEU 44 HIS 45 HIS 46 LEU 47 VAL 48 TRP 49 GLU 50 ILE 51 VAL 52 ASP 53 ASN 54 SER 55 ILE 56 ASP 57 GLU 58 ALA 59 LEU 60 ALA 61 GLY 62 TYR 63 ALA 64 ASN 65 GLN 66 ILE 67 GLU 68 VAL 69 VAL 70 ILE 71 GLU 72 LYS 73 ASP 74 ASN 75 TRP 76 ILE 77 LYS 78 VAL 79 THR 80 ASP 81 ASN 82 GLY 83 ARG 84 GLY 85 ILE 86 PRO 87 VAL 88 ASP 89 ILE 90 GLN 91 GLY 95 ARG 96 PRO 97 ALA 98 VAL 99 GLU 100 VAL 101 ILE 102 LEU 103 THR 104 SER 128 SER 129 VAL 130 VAL 131 ASN 132 ALA 133 LEU 134 SER 135 GLN 136 ASP 137 LEU 138 GLU 139 VAL 140 TYR 141 VAL 142 HIS 143 ARG 144 ASN 145 GLU 146 THR 147 ILE 148 TYR 149 HIS 150 GLN 151 ALA 152 TYR 153 LYS 154 LYS 155 GLY 156 VAL 157 PRO 158 GLN 159 PHE 160 ASP 161 LEU 162 LYS 163 GLU 164 VAL 165 GLY 166 THR 167 THR 168 ASP 169 LYS 170 THR 171 GLY 172 THR 173 VAL 174 ILE 175 ARG 176 PHE 177 LYS 178 ALA 179 ASP 180 GLY 181 GLU 182 ILE 183 PHE 184 THR 185 GLU 186 THR 187 THR 188 VAL 189 TYR 190 ASN 191 TYR 192 GLU 193 THR 194 LEU 195 GLN 196 GLN 197 ARG 198 ILE 199 ARG 200 GLU 201 LEU 202 ALA 203 PHE 204 LEU 205 ASN 206 LYS 207 GLY 208 ILE 209 GLN 210 ILE 211 THR 212 LEU 213 ARG 214 ASP 215 GLU 216 ARG 217 ASP 218 GLU 219 GLU 220 ASN 221 VAL 222 ARG 223 GLU 224 ASP 225 SER 226 TYR 227 HIS 228 TYR 229 GLU 230 GLY 231

Ligands

Unit 3	MPD 301 MPD 302
Unit 4	MPD 301 MPD 302 57V 303 MG 304 MG 305