5D6C - Sequence, Chains, Asymmetric and Biological Units

• Title: STRUCTURE OF 4497 FAB BOUND TO SYNTHETIC WALL TEICHOIC ACID
• Keywords: STAPHYLOCOCCUS AUREUS WALL TEICHOIC ACID ANTIBODY MRSA, IMMU
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5D6C	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	4497 ANTIBODY IGK (VL AND CL)	A	219	1714	0
2	Protein	4497 ANTIBODY IGG1 (VH AND CH1)	B	210	1568	0
3	Protein	4497 ANTIBODY IGG1 (VH AND CH1)	H	219	1628	0
4	Protein	4497 ANTIBODY IGK (VL AND CL)	L	219	1718	0
5	Ligand	4497 ANTIBODY IGK (VL AND CL)	A	2	0	2
6	Ligand	4497 ANTIBODY IGG1 (VH AND CH1)	B	1	0	28
7	Ligand	4497 ANTIBODY IGG1 (VH AND CH1)	H	3	0	11
8	Ligand	4497 ANTIBODY IGK (VL AND CL)	L	3	0	33
9	Water			702	0	702
total				1578	6628	776

Proteins

Unit 1	ASP 1 ILE 2 GLN 3 LEU 4 THR 5 GLN 6 SER 7 PRO 8 ASP 9 SER 10 LEU 11 ALA 12 VAL 13 SER 14 LEU 15 GLY 16 GLU 17 ARG 18 ALA 19 THR 20 ILE 21 ASN 22 CYS 23 LYS 24 SER 25 SER 26 GLN 27 SER 27A ILE 27B PHE 27C ARG 27D THR 27E SER 27F ARG 28 ASN 29 LYS 30 ASN 31 LEU 32 LEU 33 ASN 34 TRP 35 TYR 36 GLN 37 GLN 38 ARG 39 PRO 40 GLY 41 GLN 42 PRO 43 PRO 44 ARG 45 LEU 46 LEU 47 ILE 48 HIS 49 TRP 50 ALA 51 SER 52 THR 53 ARG 54 LYS 55 SER 56 GLY 57 VAL 58 PRO 59 ASP 60 ARG 61 PHE 62 SER 63 GLY 64 SER 65 GLY 66 PHE 67 GLY 68 THR 69 ASP 70 PHE 71 THR 72 LEU 73 THR 74 ILE 75 THR 76 SER 77 LEU 78 GLN 79 ALA 80 GLU 81 ASP 82 VAL 83 ALA 84 ILE 85 TYR 86 TYR 87 CYS 88 GLN 89 GLN 90 TYR 91 PHE 92 SER 93 PRO 94 PRO 95 TYR 96 THR 97 PHE 98 GLY 99 GLN 100 GLY 101 THR 102 LYS 103 LEU 104 GLU 105 ILE 106 LYS 107 ARG 108 THR 109 VAL 110 ALA 111 ALA 112 PRO 113 SER 114 VAL 115 PHE 116 ILE 117 PHE 118 PRO 119 PRO 120 SER 121 ASP 122 GLU 123 GLN 124 LEU 125 LYS 126 SER 127 GLY 128 THR 129 ALA 130 SER 131 VAL 132 VAL 133 CYS 134 LEU 135 LEU 136 ASN 137 ASN 138 PHE 139 TYR 140 PRO 141 ARG 142 GLU 143 ALA 144 LYS 145 VAL 146 GLN 147 TRP 148 LYS 149 VAL 150 ASP 151 ASN 152 ALA 153 LEU 154 GLN 155 SER 156 GLY 157 ASN 158 SER 159 GLN 160 GLU 161 SER 162 VAL 163 THR 164 GLU 165 GLN 166 ASP 167 SER 168 LYS 169 ASP 170 SER 171 THR 172 TYR 173 SER 174 LEU 175 SER 176 SER 177 THR 178 LEU 179 THR 180 LEU 181 SER 182 LYS 183 ALA 184 ASP 185 TYR 186 GLU 187 LYS 188 HIS 189 LYS 190 VAL 191 TYR 192 ALA 193 CYS 194 GLU 195 VAL 196 THR 197 HIS 198 GLN 199 GLY 200 LEU 201 SER 202 SER 203 PRO 204 VAL 205 THR 206 LYS 207 SER 208 PHE 209 ASN 210 ARG 211 GLY 212 GLU 213
Unit 2	GLU 1 VAL 2 GLN 3 LEU 4 VAL 5 GLU 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 GLN 13 PRO 14 GLY 15 GLY 16 SER 17 LEU 18 ARG 19 LEU 20 SER 21 CYS 22 SER 23 ALA 24 SER 25 GLY 26 PHE 27 SER 28 PHE 29 ASN 30 SER 31 PHE 32 TRP 33 MET 34 HIS 35 TRP 36 VAL 37 ARG 38 GLN 39 VAL 40 PRO 41 GLY 42 LYS 43 GLY 44 LEU 45 VAL 46 TRP 47 ILE 48 SER 49 PHE 50 THR 51 ASN 52 ASN 52A GLU 53 GLY 54 THR 55 THR 56 THR 57 ALA 58 TYR 59 ALA 60 ASP 61 SER 62 VAL 63 ARG 64 GLY 65 ARG 66 PHE 67 ILE 68 ILE 69 SER 70 ARG 71 ASP 72 ASN 73 ALA 74 LYS 75 ASN 76 THR 77 LEU 78 TYR 79 LEU 80 GLU 81 MET 82 ASN 82A ASN 82B LEU 82C ARG 83 GLY 84 GLU 85 ASP 86 THR 87 ALA 88 VAL 89 TYR 90 TYR 91 CYS 92 ALA 93 ARG 94 GLY 95 ASP 96 GLY 97 GLY 98 LEU 99 ASP 100 ASP 101 TRP 102 GLY 103 GLN 104 GLY 105 THR 106 LEU 107 VAL 108 THR 109 VAL 110 SER 111 SER 112 ALA 113 SER 114 THR 115 LYS 116 GLY 117 PRO 118 SER 119 VAL 120 PHE 121 PRO 122 LEU 123 ALA 124 PRO 125 SER 126 GLY 133 THR 134 ALA 135 ALA 136 LEU 137 GLY 138 CYS 139 LEU 140 VAL 141 LYS 142 ASP 143 TYR 144 PHE 145 PRO 146 GLU 147 PRO 148 VAL 149 THR 150 VAL 151 SER 152 TRP 153 ASN 154 SER 155 GLY 156 ALA 157 LEU 158 THR 159 SER 160 GLY 161 VAL 162 HIS 163 THR 164 PHE 165 PRO 166 ALA 167 VAL 168 LEU 169 GLN 170 SER 171 SER 172 GLY 173 LEU 174 TYR 175 SER 176 LEU 177 SER 178 SER 179 VAL 180 VAL 181 THR 182 VAL 183 PRO 184 SER 185 SER 186 SER 187 LEU 188 GLY 189 THR 190 GLN 191 THR 192 TYR 193 ILE 194 CYS 195 ASN 196 VAL 197 ASN 198 HIS 199 LYS 200 PRO 201 SER 202 ASN 203 THR 204 LYS 205 VAL 206 ASP 207 LYS 208 LYS 209 VAL 210 GLU 211 PRO 212
Unit 3	GLU 1 VAL 2 GLN 3 LEU 4 VAL 5 GLU 6 SER 7 GLY 8 GLY 9 GLY 10 LEU 11 VAL 12 GLN 13 PRO 14 GLY 15 GLY 16 SER 17 LEU 18 ARG 19 LEU 20 SER 21 CYS 22 SER 23 ALA 24 SER 25 GLY 26 PHE 27 SER 28 PHE 29 ASN 30 SER 31 PHE 32 TRP 33 MET 34 HIS 35 TRP 36 VAL 37 ARG 38 GLN 39 VAL 40 PRO 41 GLY 42 LYS 43 GLY 44 LEU 45 VAL 46 TRP 47 ILE 48 SER 49 PHE 50 THR 51 ASN 52 ASN 52A GLU 53 GLY 54 THR 55 THR 56 THR 57 ALA 58 TYR 59 ALA 60 ASP 61 SER 62 VAL 63 ARG 64 GLY 65 ARG 66 PHE 67 ILE 68 ILE 69 SER 70 ARG 71 ASP 72 ASN 73 ALA 74 LYS 75 ASN 76 THR 77 LEU 78 TYR 79 LEU 80 GLU 81 MET 82 ASN 82A ASN 82B LEU 82C ARG 83 GLY 84 GLU 85 ASP 86 THR 87 ALA 88 VAL 89 TYR 90 TYR 91 CYS 92 ALA 93 ARG 94 GLY 95 ASP 96 GLY 97 GLY 98 LEU 99 ASP 100 ASP 101 TRP 102 GLY 103 GLN 104 GLY 105 THR 106 LEU 107 VAL 108 THR 109 VAL 110 SER 111 SER 112 ALA 113 SER 114 THR 115 LYS 116 GLY 117 PRO 118 SER 119 VAL 120 PHE 121 PRO 122 LEU 123 ALA 124 PRO 125 SER 126 SER 127 LYS 128 SER 129 THR 130 SER 131 GLY 132 GLY 133 THR 134 ALA 135 ALA 136 LEU 137 GLY 138 CYS 139 LEU 140 VAL 141 LYS 142 ASP 143 TYR 144 PHE 145 PRO 146 GLU 147 PRO 148 VAL 149 THR 150 VAL 151 SER 152 TRP 153 ASN 154 SER 155 GLY 156 ALA 157 LEU 158 THR 159 SER 160 GLY 161 VAL 162 HIS 163 THR 164 PHE 165 PRO 166 ALA 167 VAL 168 LEU 169 GLN 170 SER 171 SER 172 GLY 173 LEU 174 TYR 175 SER 176 LEU 177 SER 178 SER 179 VAL 180 VAL 181 THR 182 VAL 183 PRO 184 SER 185 SER 186 SER 187 LEU 188 GLY 189 THR 190 GLN 191 THR 192 TYR 193 ILE 194 CYS 195 ASN 196 VAL 197 ASN 198 HIS 199 LYS 200 PRO 201 SER 202 ASN 203 THR 204 LYS 205 VAL 206 ASP 207 LYS 208 LYS 209 VAL 210 GLU 211 PRO 212 LYS 216 SER 217 CYS 218
Unit 4	ASP 1 ILE 2 GLN 3 LEU 4 THR 5 GLN 6 SER 7 PRO 8 ASP 9 SER 10 LEU 11 ALA 12 VAL 13 SER 14 LEU 15 GLY 16 GLU 17 ARG 18 ALA 19 THR 20 ILE 21 ASN 22 CYS 23 LYS 24 SER 25 SER 26 GLN 27 SER 27A ILE 27B PHE 27C ARG 27D THR 27E SER 27F ARG 34 ASN 35 LYS 36 ASN 37 LEU 38 LEU 39 ASN 40 TRP 41 TYR 42 GLN 43 GLN 44 ARG 45 PRO 46 GLY 47 GLN 48 PRO 49 PRO 50 ARG 51 LEU 52 LEU 53 ILE 54 HIS 55 TRP 56 ALA 57 SER 58 THR 59 ARG 60 LYS 61 SER 62 GLY 63 VAL 64 PRO 65 ASP 66 ARG 67 PHE 68 SER 69 GLY 70 SER 71 GLY 72 PHE 73 GLY 74 THR 75 ASP 76 PHE 77 THR 78 LEU 79 THR 80 ILE 81 THR 82 SER 83 LEU 84 GLN 85 ALA 86 GLU 87 ASP 88 VAL 89 ALA 90 ILE 91 TYR 92 TYR 93 CYS 94 GLN 95 GLN 96 TYR 97 PHE 98 SER 99 PRO 100 PRO 101 TYR 102 THR 103 PHE 104 GLY 105 GLN 106 GLY 107 THR 108 LYS 109 LEU 110 GLU 111 ILE 112 LYS 113 ARG 114 THR 115 VAL 116 ALA 117 ALA 118 PRO 119 SER 120 VAL 121 PHE 122 ILE 123 PHE 124 PRO 125 PRO 126 SER 127 ASP 128 GLU 129 GLN 130 LEU 131 LYS 132 SER 133 GLY 134 THR 135 ALA 136 SER 137 VAL 138 VAL 139 CYS 140 LEU 141 LEU 142 ASN 143 ASN 144 PHE 145 TYR 146 PRO 147 ARG 148 GLU 149 ALA 150 LYS 151 VAL 152 GLN 153 TRP 154 LYS 155 VAL 156 ASP 157 ASN 158 ALA 159 LEU 160 GLN 161 SER 162 GLY 163 ASN 164 SER 165 GLN 166 GLU 167 SER 168 VAL 169 THR 170 GLU 171 GLN 172 ASP 173 SER 174 LYS 175 ASP 176 SER 177 THR 178 TYR 179 SER 180 LEU 181 SER 182 SER 183 THR 184 LEU 185 THR 186 LEU 187 SER 188 LYS 189 ALA 190 ASP 191 TYR 192 GLU 193 LYS 194 HIS 195 LYS 196 VAL 197 TYR 198 ALA 199 CYS 200 GLU 201 VAL 202 THR 203 HIS 204 GLN 205 GLY 206 LEU 207 SER 208 SER 209 PRO 210 VAL 211 THR 212 LYS 213 SER 214 PHE 215 ASN 216 ARG 217 GLY 218 GLU 219

Ligands

Unit 5	CA 301 CA 302
Unit 6	57S 301
Unit 7	CA 301 ACT 302 GOL 303
Unit 8	CA 301 ACT 302 57S 303