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Sequence, Chains, Asymmetric and Biological Units

Title CATALYTIC DOMAIN OF LYTA, THE MAJOR AUTOLYSIN OF STREPTOCOCC PNEUMONIAE, (C60A, H133A, C136A MUTANT) COMPLEXED WITH PEPT FRAGMENT
Keywords LYTA, PNEUMOCOCCI, AUTOLYSIS, AMIDASE, PEPTIDOGLYCAN COMPLEX ANTIBIOTICS, HYDROLASE
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5CTV     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   AUTOLYSIN  A 176 1383 0
2  Protein   FRAGMENT OF PEPTIDOGLYCAN  C 4 14 14
3  Protein   FRAGMENT OF PEPTIDOGLYCAN  E 2 5 6
4  Ligand    B 4 0 66
5 Water     248 0 248
total       434 1402 334

Proteins
Unit 1 ALA-1 SER0 MET1 GLU2 ILE3 ASN4 VAL5 SER6 LYS7 LEU8 ARG9 THR10 ASP11 LEU12 PRO13 GLN14 VAL15 GLY16 VAL17 GLN18 PRO19 TYR20 ARG21 GLN22 VAL23 HIS24 ALA25 HIS26 SER27 THR28 GLY29 ASN30 PRO31 HIS32 SER33 THR34 VAL35 GLN36 ASN37 GLU38 ALA39 ASP40 TYR41 HIS42 TRP43 ARG44 LYS45 ASP46 PRO47 GLU48 LEU49 GLY50 PHE51 PHE52 SER53 HIS54 ILE55 VAL56 GLY57 ASN58 GLY59 ALA60 ILE61 MET62 GLN63 VAL64 GLY65 PRO66 VAL67 ASP68 ASN69 GLY70 ALA71 TRP72 ASP73 VAL74 GLY75 GLY76 GLY77 TRP78 ASN79 ALA80 GLU81 THR82 TYR83 ALA84 ALA85 VAL86 GLU87 LEU88 ILE89 GLU90 SER91 HIS92 SER93 THR94 LYS95 GLU96 GLU97 PHE98 MET99 THR100 ASP101 TYR102 ARG103 LEU104 TYR105 ILE106 GLU107 LEU108 LEU109 ARG110 ASN111 LEU112 ALA113 ASP114 GLU115 ALA116 GLY117 LEU118 PRO119 LYS120 THR121 LEU122 ASP123 THR124 GLY125 SER126 LEU127 ALA128 GLY129 ILE130 LYS131 THR132 ALA133 GLU134 TYR135 ALA136 THR137 ASN138 ASN139 GLN140 PRO141 ASN142 ASN143 HIS144 SER145 ASP146 HIS147 VAL148 ASP149 PRO150 TYR151 PRO152 TYR153 LEU154 ALA155 LYS156 TRP157 GLY158 ILE159 SER160 ARG161 GLU162 GLN163 PHE164 LYS165 HIS166 ASP167 ILE168 GLU169 ASN170 GLY171 LEU172 THR173 ILE174
Unit 2 ALA12 DGL13 LYS14 DAL15
Unit 3 ALA23 DGL24

Ligands
Unit 4 AMV1 NAG2 AMV3 NAG4

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany