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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THE HOLLIDAY JUNCTION-RESOLVING ENZYME IN COMPLEX WITH PRODUCT DNA AND MG2+ ION
Keywords HOLIDAY JUNCTION, RESOLVASE, COMPLEX, DNA, HYDROLASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5CO8     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Other macromolecule   DNA (31-MER)  R 31 602 0
2  Protein   NUCLEASE-LIKE PROTEIN  C 397 3053 56
3  Other macromolecule   DNA (5'-D(*AP*GP*AP*CP*TP*GP*CP*AP*GP*TP*TP*GP*AP 3')  X 16 296 0
4  Protein   NUCLEASE-LIKE PROTEIN  A 393 3038 40
5  Other macromolecule   DNA (5'-D(*TP*GP*AP*GP*CP*GP*GP*TP*GP*GP*TP*TP*GP 3')  H 15 298 0
6  Ligand   NUCLEASE-LIKE PROTEIN  C 1 0 1
7  Ligand   NUCLEASE-LIKE PROTEIN  A 1 0 1
8 Water     29 0 29
total       883 7287 127
Proteins
Unit 2 GLY2 ILE3 LYS4 GLY5 ILE6 TYR7 LYS8 GLU9 ILE10 GLY11 SER12 GLY13 GLU14 ARG15 ILE16 SER17 LEU18 CYS19 LYS20 LEU21 ALA22 ILE23 ASP24 HIS25 LEU26 GLU27 GLN28 HIS29 ASN30 ARG31 PRO32 LEU33 ARG34 LEU35 ALA36 ILE37 ASP38 MSE39 ALA40 ILE41 TRP42 GLN43 PHE44 GLN45 ILE46 GLN47 ALA48 ALA49 ARG50 GLY51 GLY52 SER53 ASN54 PRO55 ALA56 ILE57 ARG58 THR59 LEU60 PHE61 TYR62 ARG63 PHE64 VAL65 ARG66 LEU67 LEU68 SER69 LEU70 GLY71 ILE72 HIS73 PRO74 ILE75 PHE76 VAL77 PHE78 ASP79 GLY80 PRO81 ASN82 LYS83 PRO84 ASN96 GLY97 VAL98 SER99 THR100 ALA101 MSE102 ALA103 LYS104 ARG105 LEU106 ILE107 ARG108 LEU109 PHE110 GLY111 PHE112 THR113 ALA114 HIS115 ASP116 ALA117 PRO118 GLY119 GLU120 ALA121 GLU122 ALA123 GLU124 CYS125 ALA126 TYR127 LEU128 GLU129 GLN130 GLN131 GLY132 ILE133 VAL134 ASP135 ALA136 VAL137 LEU138 SER139 GLU140 ASP141 VAL142 ASP143 THR144 ILE145 MSE146 PHE147 GLY148 SER149 ARG150 VAL151 THR152 LEU153 ARG154 ASP155 TRP156 SER157 SER158 GLU159 GLY163 GLY164 PRO165 PRO166 THR167 HIS168 VAL169 THR170 LEU171 HIS172 ASP173 ALA174 LYS175 LYS176 ILE177 ALA178 GLU179 GLY180 PRO181 SER182 GLY183 LEU184 ASP185 ARG186 GLU187 GLY188 MSE189 VAL190 LEU191 VAL192 ALA193 LEU194 MSE195 SER196 GLY197 GLY198 ASP199 TYR200 LEU201 PRO202 ASP203 GLY204 ILE205 PRO206 GLY207 CYS208 GLY209 ILE210 LYS211 VAL212 ALA213 CYS214 GLN215 ALA216 ALA217 LYS218 ALA219 GLY220 PHE221 GLY222 LYS223 GLU224 LEU225 CYS226 ALA235 ILE236 THR237 GLU238 TRP239 LYS240 GLN241 ARG242 LEU243 LEU244 HIS245 GLU246 LEU247 ARG248 THR249 ASN250 GLU251 SER252 GLY253 PHE254 PHE255 ARG256 THR257 LYS258 HIS259 LYS260 ALA261 LEU262 GLU263 ILE264 PRO265 GLU266 ASN267 PHE268 PRO269 ASN270 MSE271 GLU272 VAL273 LEU274 ARG275 TYR276 TYR277 THR278 HIS279 PRO280 VAL281 VAL282 SER283 SER284 PRO285 ALA286 THR287 ILE288 GLU289 ARG290 LEU291 ARG292 GLN293 GLU294 PHE295 PRO296 PRO297 SER298 SER299 THR300 VAL301 ASP302 ILE303 ALA304 GLY305 LEU306 ARG307 GLU308 PHE309 THR310 ARG311 GLU312 THR313 PHE314 ASP315 TRP316 THR317 PHE318 ARG319 PRO320 GLY321 ALA322 ILE323 LYS324 LEU325 ILE326 LYS327 VAL328 LEU329 ALA330 PRO331 GLY332 LEU333 LEU334 VAL335 GLN336 ARG337 CYS338 LEU339 ASP340 ARG341 TYR342 GLU357 GLU358 SER359 THR360 LEU361 VAL362 LYS363 GLY364 ILE365 SER366 MSE367 ARG368 ARG369 GLU370 HIS371 PHE372 SER373 THR374 ASP375 ALA376 THR377 PRO378 GLU379 LEU380 ARG381 VAL382 SER383 PHE384 ILE385 PRO386 ALA387 GLU388 LEU389 VAL390 GLY391 LEU392 ASP393 PRO394 GLY395 GLN396 GLU397 PRO398 GLU399 VAL400 PRO432 PHE433 ASP434 PRO435 TRP436 GLN437 PRO438 ASP439 LEU440 ALA441 TRP442 VAL443 PRO444 GLU445 THR446 ILE447 LEU448 LYS449 LEU450 GLY451 VAL452 PRO453 VAL454 THR455 VAL456 GLU457 ASP458 TRP459 GLU460 GLU461 GLY462 GLN463 ARG464 SER465
Unit 4 GLY2 ILE3 LYS4 GLY5 ILE6 TYR7 LYS8 GLU9 ILE10 GLY11 SER12 GLY13 GLU14 ARG15 ILE16 SER17 LEU18 CYS19 LYS20 LEU21 ALA22 ILE23 ASP24 HIS25 LEU26 GLU27 GLN28 HIS29 ASN30 ARG31 PRO32 LEU33 ARG34 LEU35 ALA36 ILE37 ASP38 MET39 ALA40 ILE41 TRP42 GLN43 PHE44 GLN45 ILE46 GLN47 ALA48 ALA49 ARG50 GLY51 GLY52 SER53 ASN54 PRO55 ALA56 ILE57 ARG58 THR59 LEU60 PHE61 TYR62 ARG63 PHE64 VAL65 ARG66 LEU67 LEU68 SER69 LEU70 GLY71 ILE72 HIS73 PRO74 ILE75 PHE76 VAL77 PHE78 ASP79 GLY80 PRO81 ASN82 LYS83 PRO84 ASN96 GLY97 VAL98 SER99 THR100 ALA101 MSE102 ALA103 LYS104 ARG105 LEU106 ILE107 ARG108 LEU109 PHE110 GLY111 PHE112 THR113 ALA114 HIS115 ASP116 ALA117 PRO118 GLY119 GLU120 ALA121 GLU122 ALA123 GLU124 CYS125 ALA126 TYR127 LEU128 GLU129 GLN130 GLN131 GLY132 ILE133 VAL134 ASP135 ALA136 VAL137 LEU138 SER139 GLU140 ASP141 VAL142 ASP143 THR144 ILE145 MSE146 PHE147 GLY148 SER149 ARG150 VAL151 THR152 LEU153 ARG154 ASP155 TRP156 SER157 SER158 GLU159 GLY163 GLY164 PRO165 PRO166 THR167 HIS168 VAL169 THR170 LEU171 HIS172 ASP173 ALA174 LYS175 LYS176 ILE177 ALA178 GLU179 GLY180 PRO181 SER182 GLY183 LEU184 ASP185 ARG186 GLU187 GLY188 MSE189 VAL190 LEU191 VAL192 ALA193 LEU194 MET195 SER196 GLY197 GLY198 ASP203 GLY204 ILE205 PRO206 GLY207 CYS208 GLY209 ILE210 LYS211 VAL212 ALA213 CYS214 GLN215 ALA216 ALA217 LYS218 ALA219 GLY220 PHE221 GLY222 LYS223 GLU224 LEU225 CYS226 ALA235 ILE236 THR237 GLU238 TRP239 LYS240 GLN241 ARG242 LEU243 LEU244 HIS245 GLU246 LEU247 ARG248 THR249 ASN250 GLU251 SER252 GLY253 PHE254 PHE255 ARG256 THR257 LYS258 HIS259 LYS260 ALA261 LEU262 GLU263 ILE264 PRO265 GLU266 ASN267 PHE268 PRO269 ASN270 MSE271 GLU272 VAL273 LEU274 ARG275 TYR276 TYR277 THR278 HIS279 PRO280 VAL281 VAL282 SER283 SER284 PRO285 ALA286 THR287 ILE288 GLU289 ARG290 LEU291 ARG292 GLN293 GLU294 PHE295 PRO296 PRO297 SER298 SER299 THR300 VAL301 ASP302 ILE303 ALA304 GLY305 LEU306 ARG307 GLU308 PHE309 THR310 ARG311 GLU312 THR313 PHE314 ASP315 TRP316 THR317 PHE318 ARG319 PRO320 GLY321 ALA322 ILE323 LYS324 LEU325 ILE326 LYS327 VAL328 LEU329 ALA330 PRO331 GLY332 LEU333 LEU334 VAL335 GLN336 ARG337 CYS338 LEU339 ASP340 ARG341 TYR342 GLU357 GLU358 SER359 THR360 LEU361 VAL362 LYS363 GLY364 ILE365 SER366 MSE367 ARG368 ARG369 GLU370 HIS371 PHE372 SER373 THR374 ASP375 ALA376 THR377 PRO378 GLU379 LEU380 ARG381 VAL382 SER383 PHE384 ILE385 PRO386 ALA387 GLU388 LEU389 VAL390 GLY391 LEU392 ASP393 PRO394 GLY395 GLN396 GLU397 PRO398 GLU399 VAL400 PRO432 PHE433 ASP434 PRO435 TRP436 GLN437 PRO438 ASP439 LEU440 ALA441 TRP442 VAL443 PRO444 GLU445 THR446 ILE447 LEU448 LYS449 LEU450 GLY451 VAL452 PRO453 VAL454 THR455 VAL456 GLU457 ASP458 TRP459 GLU460 GLU461 GLY462 GLN463 ARG464 SER465
Other macromolecules
Unit 1 DT0 DT1 DC2 DC3 DA4 DA5 DC6 DC7 DA8 DC9 DC10 DG11 DC12 DT13 DC14 DA15 DA16 DC17 DT18 DC19 DA20 DA21 DC22 DT23 DG24 DC25 DA26 DG27 DT28 DC29 DT30
Unit 3 DA1 DG2 DA3 DC4 DT5 DG6 DC7 DA8 DG9 DT10 DT11 DG12 DA13 DG14 DT15 DC16
Unit 5 DT16 DG17 DA18 DG19 DC20 DG21 DG22 DT23 DG24 DG25 DT26 DT27 DG28 DG29 DA30
Ligands
Unit 6 MG501
Unit 7 MG501
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany