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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE-GUIDED DESIGN OF SELF-ASSEMBLING RNA NANO
Keywords SENECA VALLEY VIRUS, NANOTRIANGLE, SELF-ASSEMBLY, RNA
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5CNR     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 16 327 0
2  RNA    B 11 241 0
3  RNA    E 16 327 0
4  RNA    F 11 241 0
5  Ligand   RNA (5'-R(*AP*GP*AP*GP*GP*AP*CP*GP*GP*CP*G)-3')  B 1 0 1
total       55 1136 1
Nucleic acids
Unit 1 G3 U4 C5 U6 A7 C8 C9 C10 A11 C12 C13 U14 C15 G16 C17 C18
Unit 2 A37 G38 A39 G40 G41 A42 C43 G44 G45 C46 G47
Unit 3 G3 U4 C5 U6 A7 C8 C9 C10 A11 C12 C13 U14 C15 G16 C17 C18
Unit 4 A37 G38 A39 G40 G41 A42 C43 G44 G45 C46 G47
Ligands
Unit 5 CL101
Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany