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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF HUMAN GLYCOGEN BRANCHING ENZYME (GBE1) WITH MALTOHEPTAOSE
Keywords TRANSFERASE, STRUCTURAL GENOMICS CONSORTIUM, SGC
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5CLW     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   1,4-ALPHA-GLUCAN-BRANCHING ENZYME  A 637 5129 0
2  Protein   1,4-ALPHA-GLUCAN-BRANCHING ENZYME  B 645 5218 0
3  Protein   1,4-ALPHA-GLUCAN-BRANCHING ENZYME  C 637 5082 0
4  Ligand    D 7 0 78
5  Ligand    E 7 0 78
6  Ligand    F 7 0 78
7  Ligand   1,4-ALPHA-GLUCAN-BRANCHING ENZYME  B 1 0 1
8 Water     171 0 171
total       2112 15429 406
Proteins
Unit 1 VAL43 ASP44 PHE45 GLN46 ARG47 ARG48 TYR49 LYS50 GLN51 PHE52 SER53 GLN54 ILE55 LEU56 LYS57 ASN58 ILE59 GLY60 GLU61 ASN62 GLU63 GLY64 GLY65 ILE66 ASP67 LYS68 PHE69 SER70 ARG71 GLY72 TYR73 GLU74 SER75 PHE76 GLY77 VAL78 HIS79 ARG80 CYS81 ALA82 ASP83 GLY84 GLY85 LEU86 TYR87 CYS88 LYS89 GLU90 TRP91 ALA92 PRO93 GLY94 ALA95 GLU96 GLY97 VAL98 PHE99 LEU100 THR101 GLY102 ASP103 PHE104 ASN105 GLY106 TRP107 ASN108 PRO109 PHE110 SER111 TYR112 PRO113 TYR114 LYS115 LYS116 LEU117 ASP118 TYR119 GLY120 LYS121 TRP122 GLU123 LEU124 TYR125 ILE126 PRO127 PRO128 LYS129 GLN130 ASN131 LYS132 SER133 VAL134 LEU135 VAL136 PRO137 HIS138 GLY139 SER140 LYS141 LEU142 LYS143 VAL144 VAL145 ILE146 THR147 SER148 LYS149 SER150 GLY151 GLU152 ILE153 LEU154 TYR155 ARG156 ILE157 SER158 PRO159 TRP160 ALA161 LYS162 TYR163 VAL164 VAL165 ARG166 GLU167 GLY168 ASP169 ASN170 VAL171 ASN172 TYR173 ASP174 TRP175 ILE176 HIS177 TRP178 ASP179 PRO180 GLU181 HIS182 SER183 TYR184 GLU185 PHE186 LYS187 HIS188 SER189 ARG190 PRO191 LYS192 LYS193 PRO194 ARG195 SER196 LEU197 ARG198 ILE199 TYR200 GLU201 SER202 HIS203 VAL204 GLY205 ILE206 SER207 SER208 HIS209 GLU210 GLY211 LYS212 VAL213 ALA214 SER215 TYR216 LYS217 HIS218 PHE219 THR220 CYS221 ASN222 VAL223 LEU224 PRO225 ARG226 ILE227 LYS228 GLY229 LEU230 GLY231 TYR232 ASN233 CYS234 ILE235 GLN236 LEU237 MET238 ALA239 ILE240 MET241 GLU242 HIS243 ALA244 TYR245 TYR246 ALA247 SER248 PHE249 GLY250 TYR251 GLN252 ILE253 THR254 SER255 PHE256 PHE257 ALA258 ALA259 SER260 SER261 ARG262 TYR263 GLY264 SER265 PRO266 GLU267 GLU268 LEU269 GLN270 GLU271 LEU272 VAL273 ASP274 THR275 ALA276 HIS277 SER278 MET279 GLY280 ILE281 ILE282 VAL283 LEU284 LEU285 ASP286 VAL287 VAL288 HIS289 SER290 HIS291 ALA292 SER293 LYS294 ASN295 SER296 ALA297 ASP298 GLY299 LEU300 ASN301 MET302 PHE303 ASP304 GLY305 THR306 ASP307 SER308 CYS309 TYR310 PHE311 HIS312 SER313 GLY314 PRO315 ARG316 GLY317 THR318 HIS319 ASP320 LEU321 TRP322 ASP323 SER324 ARG325 LEU326 PHE327 ALA328 TYR329 SER330 SER331 TRP332 GLU333 VAL334 LEU335 ARG336 PHE337 LEU338 LEU339 SER340 ASN341 ILE342 ARG343 TRP344 TRP345 LEU346 GLU347 GLU348 TYR349 ARG350 PHE351 ASP352 GLY353 PHE354 ARG355 PHE356 ASP357 GLY358 VAL359 THR360 SER361 MET362 LEU363 TYR364 HIS365 GLN384 VAL385 ASP386 GLU387 ASP388 ALA389 LEU390 THR391 TYR392 LEU393 MET394 LEU395 ALA396 ASN397 HIS398 LEU399 VAL400 HIS401 THR402 LEU403 CYS404 PRO405 ASP406 SER407 ILE408 THR409 ILE410 ALA411 GLU412 ASP413 VAL414 SER415 GLY416 MET417 PRO418 ALA419 LEU420 CYS421 SER422 PRO423 ILE424 SER425 GLN426 GLY427 GLY428 GLY429 GLY430 PHE431 ASP432 TYR433 ARG434 LEU435 ALA436 MET437 ALA438 ILE439 PRO440 ASP441 LYS442 TRP443 ILE444 GLN445 LEU446 LEU447 LYS448 GLU449 PHE450 LYS451 ASP452 GLU453 ASP454 TRP455 ASN456 MET457 GLY458 ASP459 ILE460 VAL461 TYR462 THR463 LEU464 THR465 ASN466 ARG467 GLU471 LYS472 CYS473 ILE474 ALA475 TYR476 ALA477 GLU478 SER479 HIS480 ASP481 GLN482 ALA483 LEU484 VAL485 GLY486 ASP487 LYS488 SER489 LEU490 ALA491 PHE492 TRP493 LEU494 MET495 ASP496 ALA497 GLU498 MET499 TYR500 THR501 ASN502 MET503 SER504 VAL505 LEU506 THR507 PRO508 PHE509 THR510 PRO511 VAL512 ILE513 ASP514 ARG515 GLY516 ILE517 GLN518 LEU519 HIS520 LYS521 MET522 ILE523 ARG524 LEU525 ILE526 THR527 HIS528 GLY529 LEU530 GLY531 GLY532 GLU533 GLY534 TYR535 LEU536 ASN537 PHE538 MET539 GLY540 ASN541 GLU542 PHE543 GLY544 HIS545 PRO546 GLU547 TRP548 LEU549 ASP550 PHE551 PRO552 ARG553 LYS554 GLY555 ASN556 ASN557 GLU558 SER559 TYR560 HIS561 TYR562 ALA563 ARG564 ARG565 GLN566 PHE567 HIS568 LEU569 THR570 ASP571 ASP572 ASP573 LEU574 LEU575 ARG576 TYR577 LYS578 PHE579 LEU580 ASN581 ASN582 PHE583 ASP584 ARG585 ASP586 MET587 ASN588 ARG589 LEU590 GLU591 GLU592 ARG593 TYR594 GLY595 TRP596 LEU597 ALA598 ALA599 PRO600 GLN601 ALA602 TYR603 VAL604 SER605 GLU606 LYS607 HIS608 GLU609 GLY610 ASN611 LYS612 ILE613 ILE614 ALA615 PHE616 GLU617 ARG618 ALA619 GLY620 LEU621 LEU622 PHE623 ILE624 PHE625 ASN626 PHE627 HIS628 PRO629 SER630 LYS631 SER632 TYR633 THR634 ASP635 TYR636 ARG637 VAL638 GLY639 THR640 ALA641 LEU642 PRO643 GLY644 LYS645 PHE646 LYS647 ILE648 VAL649 LEU650 ASP651 SER652 ASP653 ALA654 ALA655 GLU656 TYR657 GLY658 GLY659 HIS660 GLN661 ARG662 LEU663 ASP664 HIS665 SER666 THR667 ASP668 PHE669 PHE670 SER671 GLU672 ALA673 PHE674 GLU675 HIS676 ASN677 GLY678 ARG679 PRO680 TYR681 SER682 LEU683 LEU684 VAL685 TYR686 ILE687 PRO688 SER689 ARG690 VAL691 ALA692 LEU693 ILE694 LEU695 GLN696 ASN697 VAL698 ASP699 LEU700
Unit 2 ASP44 PHE45 GLN46 ARG47 ARG48 TYR49 LYS50 GLN51 PHE52 SER53 GLN54 ILE55 LEU56 LYS57 ASN58 ILE59 GLY60 GLU61 ASN62 GLU63 GLY64 GLY65 ILE66 ASP67 LYS68 PHE69 SER70 ARG71 GLY72 TYR73 GLU74 SER75 PHE76 GLY77 VAL78 HIS79 ARG80 CYS81 ALA82 ASP83 GLY84 GLY85 LEU86 TYR87 CYS88 LYS89 GLU90 TRP91 ALA92 PRO93 GLY94 ALA95 GLU96 GLY97 VAL98 PHE99 LEU100 THR101 GLY102 ASP103 PHE104 ASN105 GLY106 TRP107 ASN108 PRO109 PHE110 SER111 TYR112 PRO113 TYR114 LYS115 LYS116 LEU117 ASP118 TYR119 GLY120 LYS121 TRP122 GLU123 LEU124 TYR125 ILE126 PRO127 PRO128 LYS129 GLN130 ASN131 LYS132 SER133 VAL134 LEU135 VAL136 PRO137 HIS138 GLY139 SER140 LYS141 LEU142 LYS143 VAL144 VAL145 ILE146 THR147 SER148 LYS149 SER150 GLY151 GLU152 ILE153 LEU154 TYR155 ARG156 ILE157 SER158 PRO159 TRP160 ALA161 LYS162 TYR163 VAL164 VAL165 ARG166 GLU167 GLY168 ASP169 ASN170 VAL171 ASN172 TYR173 ASP174 TRP175 ILE176 HIS177 TRP178 ASP179 PRO180 GLU181 HIS182 SER183 TYR184 GLU185 PHE186 LYS187 HIS188 SER189 ARG190 PRO191 LYS192 LYS193 PRO194 ARG195 SER196 LEU197 ARG198 ILE199 TYR200 GLU201 SER202 HIS203 VAL204 GLY205 ILE206 SER207 SER208 HIS209 GLU210 GLY211 LYS212 VAL213 ALA214 SER215 TYR216 LYS217 HIS218 PHE219 THR220 CYS221 ASN222 VAL223 LEU224 PRO225 ARG226 ILE227 LYS228 GLY229 LEU230 GLY231 TYR232 ASN233 CYS234 ILE235 GLN236 LEU237 MET238 ALA239 ILE240 MET241 GLU242 HIS243 ALA244 TYR245 TYR246 ALA247 SER248 PHE249 GLY250 TYR251 GLN252 ILE253 THR254 SER255 PHE256 PHE257 ALA258 ALA259 SER260 SER261 ARG262 TYR263 GLY264 SER265 PRO266 GLU267 GLU268 LEU269 GLN270 GLU271 LEU272 VAL273 ASP274 THR275 ALA276 HIS277 SER278 MET279 GLY280 ILE281 ILE282 VAL283 LEU284 LEU285 ASP286 VAL287 VAL288 HIS289 SER290 HIS291 ALA292 SER293 LYS294 ASN295 SER296 ALA297 ASP298 GLY299 LEU300 ASN301 MET302 PHE303 ASP304 GLY305 THR306 ASP307 SER308 CYS309 TYR310 PHE311 HIS312 SER313 GLY314 PRO315 ARG316 GLY317 THR318 HIS319 ASP320 LEU321 TRP322 ASP323 SER324 ARG325 LEU326 PHE327 ALA328 TYR329 SER330 SER331 TRP332 GLU333 VAL334 LEU335 ARG336 PHE337 LEU338 LEU339 SER340 ASN341 ILE342 ARG343 TRP344 TRP345 LEU346 GLU347 GLU348 TYR349 ARG350 PHE351 ASP352 GLY353 PHE354 ARG355 PHE356 ASP357 GLY358 VAL359 THR360 SER361 MET362 LEU363 TYR364 HIS365 HIS366 HIS367 GLU379 TYR380 PHE381 GLY382 LEU383 GLN384 VAL385 ASP386 GLU387 ASP388 ALA389 LEU390 THR391 TYR392 LEU393 MET394 LEU395 ALA396 ASN397 HIS398 LEU399 VAL400 HIS401 THR402 LEU403 CYS404 PRO405 ASP406 SER407 ILE408 THR409 ILE410 ALA411 GLU412 ASP413 VAL414 SER415 GLY416 MET417 PRO418 ALA419 LEU420 CYS421 SER422 PRO423 ILE424 SER425 GLN426 GLY427 GLY428 GLY429 GLY430 PHE431 ASP432 TYR433 ARG434 LEU435 ALA436 MET437 ALA438 ILE439 PRO440 ASP441 LYS442 TRP443 ILE444 GLN445 LEU446 LEU447 LYS448 GLU449 PHE450 LYS451 ASP452 GLU453 ASP454 TRP455 ASN456 MET457 GLY458 ASP459 ILE460 VAL461 TYR462 THR463 LEU464 THR465 ASN466 ARG467 ARG468 TYR469 LEU470 GLU471 LYS472 CYS473A ILE474 ALA475 TYR476 ALA477 GLU478 SER479 HIS480 ASP481 GLN482 ALA483 LEU484 VAL485 GLY486 ASP487 LYS488 SER489 LEU490 ALA491 PHE492 TRP493 LEU494 MET495 ASP496 ALA497 GLU498 MET499 TYR500 THR501 ASN502 MET503 SER504 VAL505 LEU506 THR507 PRO508 PHE509 THR510 PRO511 VAL512 ILE513 ASP514 ARG515 GLY516 ILE517 GLN518 LEU519 HIS520 LYS521 MET522 ILE523 ARG524 LEU525 ILE526 THR527 HIS528 GLY529 LEU530 GLY531 GLY532 GLU533 GLY534 TYR535 LEU536 ASN537 PHE538 MET539 GLY540 ASN541 GLU542 PHE543 GLY544 HIS545 PRO546 GLU547 TRP548 LEU549 ASP550 PHE551 PRO552 ARG553 LYS554 GLY555 ASN556 ASN557 GLU558 SER559 TYR560 HIS561 TYR562 ALA563 ARG564 ARG565 GLN566 PHE567 HIS568 LEU569 THR570 ASP571 ASP572 ASP573 LEU574 LEU575 ARG576 TYR577 LYS578 PHE579 LEU580 ASN581 ASN582 PHE583 ASP584 ARG585 ASP586 MET587 ASN588 ARG589 LEU590 GLU591 GLU592 ARG593 TYR594 GLY595 TRP596 LEU597 ALA598 ALA599 PRO600 GLN601 ALA602 TYR603 VAL604 SER605 GLU606 LYS607 HIS608 GLU609 GLY610 ASN611 LYS612 ILE613 ILE614 ALA615 PHE616 GLU617 ARG618 ALA619 GLY620 LEU621 LEU622 PHE623 ILE624 PHE625 ASN626 PHE627 HIS628 PRO629 SER630 LYS631 SER632 TYR633 THR634 ASP635 TYR636 ARG637 VAL638 GLY639 THR640 ALA641 LEU642 PRO643 GLY644 LYS645 PHE646 LYS647 ILE648 VAL649 LEU650 ASP651 SER652 ASP653 ALA654 ALA655 GLU656 TYR657 GLY658 GLY659 HIS660 GLN661 ARG662 LEU663 ASP664 HIS665 SER666 THR667 ASP668 PHE669 PHE670 SER671 GLU672 ALA673 PHE674 GLU675 HIS676 ASN677 GLY678 ARG679 PRO680 TYR681 SER682 LEU683 LEU684 VAL685 TYR686 ILE687 PRO688 SER689 ARG690 VAL691 ALA692 LEU693 ILE694 LEU695 GLN696 ASN697 VAL698 ASP699
Unit 3 GLN46 ARG47 ARG48 TYR49 LYS50 GLN51 PHE52 SER53 GLN54 ILE55 LEU56 LYS57 ASN58 ILE59 GLY60 GLU61 ASN62 GLU63 GLY64 GLY65 ILE66 ASP67 LYS68 PHE69 SER70 ARG71 GLY72 TYR73 GLU74 SER75 PHE76 GLY77 VAL78 HIS79 ARG80 CYS81 ALA82 ASP83 GLY84 GLY85 LEU86 TYR87 CYS88 LYS89 GLU90 TRP91 ALA92 PRO93 GLY94 ALA95 GLU96 GLY97 VAL98 PHE99 LEU100 THR101 GLY102 ASP103 PHE104 ASN105 GLY106 TRP107 ASN108 PRO109 PHE110 SER111 TYR112 PRO113 TYR114 LYS115 LYS116 LEU117 ASP118 TYR119 GLY120 LYS121 TRP122 GLU123 LEU124 TYR125 ILE126 PRO127 PRO128 LYS129 GLN130 ASN131 LYS132 SER133 VAL134 LEU135 VAL136 PRO137 HIS138 GLY139 SER140 LYS141 LEU142 LYS143 VAL144 VAL145 ILE146 THR147 SER148 LYS149 SER150 GLY151 GLU152 ILE153 LEU154 TYR155 ARG156 ILE157 SER158 PRO159 TRP160 ALA161 LYS162 TYR163 VAL164 VAL165 ARG166 GLU167 GLY168 ASP169 ASN170 VAL171 ASN172 TYR173 ASP174 TRP175 ILE176 HIS177 TRP178 ASP179 PRO180 GLU181 HIS182 SER183 TYR184 GLU185 PHE186 LYS187 HIS188 SER189 ARG190 PRO191 LYS192 LYS193 PRO194 ARG195 SER196 LEU197 ARG198 ILE199 TYR200 GLU201 SER202 HIS203 VAL204 GLY205 ILE206 SER207 SER208 HIS209 GLU210 GLY211 LYS212 VAL213 ALA214 SER215 TYR216 LYS217 HIS218 PHE219 THR220 CYS221 ASN222 VAL223 LEU224 PRO225 ARG226 ILE227 LYS228 GLY229 LEU230 GLY231 TYR232 ASN233 CYS234 ILE235 GLN236 LEU237 MET238 ALA239 ILE240 MET241 GLU242 HIS243 ALA244 TYR245 TYR246 ALA247 SER248 PHE249 GLY250 TYR251 GLN252 ILE253 THR254 SER255 PHE256 PHE257 ALA258 ALA259 SER260 SER261 ARG262 TYR263 GLY264 SER265 PRO266 GLU267 GLU268 LEU269 GLN270 GLU271 LEU272 VAL273 ASP274 THR275 ALA276 HIS277 SER278 MET279 GLY280 ILE281 ILE282 VAL283 LEU284 LEU285 ASP286 VAL287 VAL288 HIS289 SER290 HIS291 ALA292 SER293 LYS294 ASN295 SER296 ALA297 ASP298 GLY299 LEU300 ASN301 MET302 PHE303 ASP304 GLY305 THR306 ASP307 SER308 CYS309 TYR310 PHE311 HIS312 SER313 GLY314 PRO315 ARG316 GLY317 THR318 HIS319 ASP320 LEU321 TRP322 ASP323 SER324 ARG325 LEU326 PHE327 ALA328 TYR329 SER330 SER331 TRP332 GLU333 VAL334 LEU335 ARG336 PHE337 LEU338 LEU339 SER340 ASN341 ILE342 ARG343 TRP344 TRP345 LEU346 GLU347 GLU348 TYR349 ARG350 PHE351 ASP352 GLY353 PHE354 ARG355 PHE356 ASP357 GLY358 VAL359 THR360 SER361 MET362 LEU363 TYR364 HIS365 LEU383 GLN384 VAL385 ASP386 GLU387 ASP388 ALA389 LEU390 THR391 TYR392 LEU393 MET394 LEU395 ALA396 ASN397 HIS398 LEU399 VAL400 HIS401 THR402 LEU403 CYS404 PRO405 ASP406 SER407 ILE408 THR409 ILE410 ALA411 GLU412 ASP413 VAL414 SER415 GLY416 MET417 PRO418 ALA419 LEU420 CYS421 SER422 PRO423 ILE424 SER425 GLN426 GLY427 GLY428 GLY429 GLY430 PHE431 ASP432 TYR433 ARG434 LEU435 ALA436 MET437 ALA438 ILE439 PRO440 ASP441 LYS442 TRP443 ILE444 GLN445 LEU446 LEU447 LYS448 GLU449 PHE450 LYS451 ASP452 GLU453 ASP454 TRP455 ASN456 MET457 GLY458 ASP459 ILE460 VAL461 TYR462 THR463 LEU464 THR465 ASN466 ARG467 ARG468 TYR469 LEU470 GLU471 LYS472 CYS473 ILE474 ALA475 TYR476 ALA477 GLU478 SER479 HIS480 ASP481 GLN482 ALA483 LEU484 VAL485 GLY486 ASP487 LYS488 SER489 LEU490 ALA491 PHE492 TRP493 LEU494 MET495 ASP496 ALA497 GLU498 MET499 TYR500 THR501 ASN502 MET503 SER504 VAL505 LEU506 THR507 PRO508 PHE509 THR510 PRO511 VAL512 ILE513 ASP514 ARG515 GLY516 ILE517 GLN518 LEU519 HIS520 LYS521 MET522 ILE523 ARG524 LEU525 ILE526 THR527 HIS528 GLY529 LEU530 GLY531 GLY532 GLU533 GLY534 TYR535 LEU536 ASN537 PHE538 MET539 GLY540 ASN541 GLU542 PHE543 GLY544 HIS545 PRO546 GLU547 TRP548 LEU549 ASP550 PHE551 PRO552 ARG553 LYS554 GLY555 ASN556 ASN557 GLU558 SER559 TYR560 HIS561 TYR562 ALA563 ARG564 ARG565 GLN566 PHE567 HIS568 LEU569 THR570 ASP571 ASP572 ASP573 LEU574 LEU575 ARG576 TYR577 LYS578 PHE579 LEU580 ASN581 ASN582 PHE583 ASP584 ARG585 ASP586 MET587 ASN588 ARG589 LEU590 GLU591 GLU592 ARG593 TYR594 GLY595 TRP596 LEU597 ALA598 ALA599 PRO600 GLN601 ALA602 TYR603 VAL604 SER605 GLU606 LYS607 HIS608 GLU609 GLY610 ASN611 LYS612 ILE613 ILE614 ALA615 PHE616 GLU617 ARG618 ALA619 GLY620 LEU621 LEU622 PHE623 ILE624 PHE625 ASN626 PHE627 HIS628 PRO629 SER630 LYS631 SER632 TYR633 THR634 ASP635 TYR636 ARG637 VAL638 GLY639 THR640 ALA641 LEU642 PRO643 GLY644 LYS645 PHE646 LYS647 ILE648 VAL649 LEU650 ASP651 SER652 ASP653 ALA654 ALA655 GLU656 TYR657 GLY658 GLY659 HIS660 GLN661 ARG662 LEU663 ASP664 HIS665 SER666 THR667 ASP668 PHE669 PHE670 SER671 GLU672 ALA673 PHE674 GLU675 HIS676 ASN677 GLY678 ARG679 PRO680 TYR681 SER682 LEU683 LEU684 VAL685 TYR686 ILE687 PRO688 SER689 ARG690 VAL691 ALA692 LEU693 ILE694 LEU695 GLN696 ASN697 VAL698 ASP699
Ligands
Unit 4 GLC1 GLC2 GLC3 GLC4 GLC5 GLC6 GLC7
Unit 5 GLC1 GLC2 GLC3 GLC4 GLC5 GLC6 GLC7
Unit 6 GLC1 GLC2 GLC3 GLC4 GLC5 GLC6 GLC7
Unit 7 NA1008
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany