5C9J - Sequence, Chains, Asymmetric and Biological Units

• Title: HUMAN CD1C WITH LIGANDS IN A' AND F' CHANNEL
• Keywords: ANTIGEN PRESENTATION, CD1, HUMAN CD1, MHC-LIKE, IMMUNOLOGY, ANTIGEN, IMMUNE SYSTEM
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	5C9J	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	T-CELL SURFACE GLYCOPROTEIN CD1C,T-CELL SURFACE GLYCOPROTEIN CD1B	A	281	2224	0
2	Protein	BETA-2-MICROGLOBULIN	B	99	828	0
3	Ligand	T-CELL SURFACE GLYCOPROTEIN CD1C,T-CELL SURFACE GLYCOPROTEIN CD1B	A	8	0	76
4	Ligand	BETA-2-MICROGLOBULIN	B	1	0	6
5	Water			116	0	116
total				505	3052	198

Proteins

Unit 1

GLU 9 HIS 10 VAL 11 SER 12 PHE 13 HIS 14 VAL 15 ILE 16 GLN 17 ILE 18 PHE 19 SER 20 PHE 21 VAL 22 ASN 23 GLN 24 SER 25 TRP 26 ALA 27 ARG 28 GLY 29 GLN 30 GLY 31 SER 32 GLY 33 TRP 34 LEU 35 ASP 36 GLU 37 LEU 38 GLN 39 THR 40 HIS 41 GLY 42 TRP 43 ASP 44 SER 45 GLU 46 SER 47 GLY 48 THR 49 ILE 50 ILE 51 PHE 52 LEU 53 HIS 54 ASN 55 TRP 56 SER 57 LYS 58 GLY 59 ASN 60 PHE 61 SER 62 ASN 63 GLU 64 GLU 65 LEU 66 SER 67 ASP 68 LEU 69 GLU 70 LEU 71 LEU 72 PHE 73 ARG 74 PHE 75 TYR 76 LEU 77 PHE 78 GLY 79 LEU 80 THR 81 ARG 82 GLU 83 ILE 84 GLN 85 ASP 86 HIS 87 ALA 88 SER 89 GLN 90 ASP 91 TYR 92 SER 93 LYS 94 TYR 95 PRO 96 PHE 97 GLU 98 VAL 99 GLN 100 VAL 101 LYS 102 ALA 103 GLY 104 CYS 105 GLU 106 LEU 107 HIS 108 SER 109 GLY 110 LYS 111 SER 112 PRO 113 GLU 114 GLY 115 PHE 116 PHE 117 GLN 118 VAL 119 ALA 120 PHE 121 ASN 122 GLY 123 LEU 124 ASP 125 LEU 126 LEU 127 SER 128 PHE 129 GLN 130 ASN 131 THR 132 THR 133 TRP 134 VAL 135 PRO 136 SER 137 PRO 138 GLY 139 CYS 140 GLY 141 SER 142 LEU 143 ALA 144 GLN 145 SER 146 VAL 147 CYS 148 HIS 149 LEU 150 LEU 151 ASN 152 HIS 153 GLN 154 TYR 155 GLU 156 GLY 157 VAL 158 THR 159 GLU 160 THR 161 VAL 162 TYR 163 ASN 164 LEU 165 ILE 166 ARG 167 SER 168 THR 169 CYS 170 PRO 171 ARG 172 PHE 173 LEU 174 LEU 175 GLY 176 LEU 177 LEU 178 ASP 179 ALA 180 GLY 181 LYS 182 MET 183 TYR 184 VAL 185 HIS 186 ARG 187 GLN 188 VAL 189 LYS 190 PRO 191 GLU 192 ALA 193 TRP 194 LEU 195 SER 196 SER 197 GLY 198 PRO 199 SER 200 PRO 201 GLY 202 PRO 203 GLY 204 ARG 205 LEU 206 GLN 207 LEU 208 VAL 209 CYS 210 HIS 211 VAL 212 SER 213 GLY 214 PHE 215 TYR 216 PRO 217 LYS 218 PRO 219 VAL 220 TRP 221 VAL 222 MET 223 TRP 224 MET 225 ARG 226 GLY 227 GLU 228 GLN 229 GLU 230 GLN 231 GLN 232 GLY 233 THR 234 GLN 235 LEU 236 GLY 237 ASP 238 ILE 239 LEU 240 PRO 241 ASN 242 ALA 243 ASN 244 TRP 245 THR 246 TRP 247 TYR 248 LEU 249 ARG 250 ALA 251 THR 252 LEU 253 ASP 254 VAL 255 ALA 256 ASP 257 GLY 258 GLU 259 ALA 260 ALA 261 GLY 262 LEU 263 SER 264 CYS 265 ARG 266 VAL 267 LYS 268 HIS 269 SER 270 SER 271 LEU 272 GLU 273 GLY 274 GLN 275 ASP 276 ILE 277 ILE 278 LEU 279 TYR 280 TRP 281 GLY 282 PRO 283 GLY 284 SER 285 GLY 286 GLY 287 GLY 288 LEU 289

Unit 2

MET 1 ILE 2 GLN 3 ARG 4 THR 5 PRO 6 LYS 7 ILE 8 GLN 9 VAL 10 TYR 11 SER 12 ARG 13 HIS 14 PRO 15 ALA 16 GLU 17 ASN 18 GLY 19 LYS 20 SER 21 ASN 22 PHE 23 LEU 24 ASN 25 CYS 26 TYR 27 VAL 28 SER 29 GLY 30 PHE 31 HIS 32 PRO 33 SER 34 ASP 35 ILE 36 GLU 37 VAL 38 ASP 39 LEU 40 LEU 41 LYS 42 ASN 43 GLY 44 GLU 45 ARG 46 ILE 47 GLU 48 LYS 49 VAL 50 GLU 51 HIS 52 SER 53 ASP 54 LEU 55 SER 56 PHE 57 SER 58 LYS 59 ASP 60 TRP 61 SER 62 PHE 63 TYR 64 LEU 65 LEU 66 TYR 67 TYR 68 THR 69 GLU 70 PHE 71 THR 72 PRO 73 THR 74 GLU 75 LYS 76 ASP 77 GLU 78 TYR 79 ALA 80 CYS 81 ARG 82 VAL 83 ASN 84 HIS 85 VAL 86 THR 87 LEU 88 SER 89 GLN 90 PRO 91 LYS 92 ILE 93 VAL 94 LYS 95 TRP 96 ASP 97 ARG 98 ASP 99

Ligands

Unit 3	DAO 301 DAO 302 STE 303 GOL 304 GOL 305 GOL 306 PO4 307 PO4 308
Unit 4	GOL 101