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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURAL BASIS OF TEMPLATE BOUNDARY DEFINITION IN TETRAHYM TELOMERASE
Keywords TELOMERASE, RNA-PROTEIN COMPLEX, RNA BINDING PROTEIN-RNA COM
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5C9H     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   TELOMERASE REVERSE TRANSCRIPTASE  A 245 2021 0
2  Protein   TELOMERASE REVERSE TRANSCRIPTASE  B 225 1864 0
3  DNA/RNA    D 10 196 0
4  RNA    C 12 247 0
5  RNA    E 10 212 0
6  RNA    G 11 227 0
7  Ligand    C 1 0 1
8  Ligand    G 1 0 1
9 Water     24 0 24
total       539 4767 26

Proteins
Unit 1 GLN218 TYR219 ILE220 TYR221 PRO222 GLU223 ILE224 GLN225 ARG226 SER227 GLN228 ILE229 PHE230 TYR231 CYS232 ASN233 HIS234 MET235 GLY236 ARG237 GLU238 PRO239 GLY240 VAL241 PHE242 LYS243 SER244 SER245 PHE246 PHE247 ASN248 TYR249 TYR293 GLN294 SER295 LYS296 ASN297 PHE298 SER299 CYS300 GLN301 GLU302 GLU303 ARG304 ASP305 LEU306 PHE307 LEU308 GLU309 PHE310 THR311 GLU312 LYS313 ILE314 VAL315 GLN316 ASN317 PHE318 HIS319 ASN320 ILE321 ASN322 PHE323 ASN324 TYR325 LEU326 LEU327 LYS328 LYS329 PHE330 CYS331 LYS332 LEU333 PRO334 GLU335 ASN336 TYR337 GLN338 SER339 LEU340 LYS341 SER342 GLN343 VAL344 LYS345 GLN346 ILE347 VAL348 LYS353 ALA354 ASN355 GLN356 GLN357 SER358 CYS359 GLU360 ASN361 LEU362 PHE363 ASN364 SER365 LEU366 TYR367 ASP368 THR369 GLU370 ILE371 SER372 TYR373 LYS374 GLN375 ILE376 THR377 ASN378 PHE379 LEU380 ARG381 GLN382 ILE383 ILE384 GLN385 ASN386 CYS387 VAL388 PRO389 ASN390 GLN391 LEU392 LEU393 GLY394 LYS395 LYS396 ASN397 PHE398 LYS399 VAL400 PHE401 LEU402 GLU403 LYS404 LEU405 TYR406 GLU407 PHE408 VAL409 GLN410 MET411 LYS412 ARG413 PHE414 GLU415 ASN416 GLN417 LYS418 VAL419 LEU420 ASP421 TYR422 ILE423 CYS424 PHE425 MET426 ASP427 VAL428 PHE429 ASP430 VAL431 GLU432 TRP433 PHE434 VAL435 ASP436 LEU437 LYS438 ASN439 GLN440 LYS441 PHE442 THR443 GLN444 LYS445 ARG446 LYS447 TYR448 ILE449 SER450 ASP451 LYS452 ARG453 LYS454 ILE455 LEU456 GLY457 ASP458 LEU459 ILE460 VAL461 PHE462 ILE463 ILE464 ASN465 LYS466 ILE467 VAL468 ILE469 PRO470 VAL471 LEU472 ARG473 TYR474 ASN475 PHE476 TYR477 ILE478 THR479 GLU480 LYS481 HIS482 LYS483 GLU484 GLY485 SER486 GLN487 ILE488 PHE489 TYR490 TYR491 ARG492 LYS493 PRO494 ILE495 TRP496 LYS497 LEU498 VAL499 SER500 LYS501 LEU502 THR503 ILE504 VAL505 LYS506 LEU507 GLU508 GLU509
Unit 2 GLN218 TYR219 ILE220 TYR221 PRO222 GLU223 ILE224 GLN225 ARG226 SER227 GLN228 ILE229 PHE230 TYR231 CYS232 ASN233 HIS234 MET235 GLY236 ARG237 GLU238 PRO239 GLY240 VAL241 PHE242 LYS243 SER244 SER245 PHE246 PHE247 ASN248 TYR249 LEU290 LYS291 GLU292 TYR293 GLN294 SER295 LYS296 ASN297 PHE298 SER299 CYS300 GLN301 GLU302 GLU303 ARG304 ASP305 LEU306 PHE307 LEU308 GLU309 PHE310 THR311 GLU312 LYS313 ILE314 VAL315 GLN316 ASN317 PHE318 HIS319 ASN320 ILE321 ASN322 PHE323 ASN324 TYR325 LEU326 LEU327 LYS328 LYS329 PHE330 CYS331 LYS332 LEU333 PRO334 GLU335 ASN336 TYR337 GLN338 SER339 LEU340 LYS341 SER342 GLN343 VAL344 LYS345 ASN361 LEU362 PHE363 ASN364 SER365 LEU366 TYR367 ASP368 THR369 GLU370 ILE371 SER372 TYR373 LYS374 GLN375 ILE376 THR377 ASN378 PHE379 LEU380 ARG381 GLN382 ILE383 ILE384 GLN385 ASN386 CYS387 VAL388 PRO389 ASN390 GLN391 LEU392 LEU393 GLY394 LYS395 LYS396 ASN397 PHE398 LYS399 VAL400 PHE401 LEU402 GLU403 LYS404 LEU405 TYR406 GLU407 PHE408 VAL409 GLN410 MET411 LYS412 ARG413 PHE414 GLU415 ASN416 GLN417 LYS418 VAL419 LEU420 ASP421 TYR422 ILE423 CYS424 PHE425 MET426 ASP427 VAL428 PHE429 ASP430 VAL431 GLU432 TRP433 PHE434 VAL435 ASP436 LEU437 LYS438 ASN439 GLN440 LYS445 ARG446 LYS447 TYR448 ILE449 SER450 ASP451 LYS452 ARG453 LYS454 ILE455 LEU456 GLY457 ASP458 LEU459 ILE460 VAL461 PHE462 ILE463 ILE464 ASN465 LYS466 ILE467 VAL468 ILE469 PRO470 VAL471 LEU472 ARG473 TYR474 ASN475 PHE476 TYR477 ILE478 THR479 GLU480 LYS481 GLU484 GLY485 SER486 GLN487 ILE488 PHE489 TYR490 TYR491 ARG492 LYS493 PRO494 ILE495 TRP496 LYS497 LEU498 VAL499 SER500 LYS501 LEU502 THR503

Nucleic acids
Unit 3 A1 G2 A3 A4 C5 U6 G7 U8 C9 A10
Unit 4 U1 C2 A3 U4 U5 C6 A7 G8 U9 U10 C11 U12
Unit 5 G-1 A0 A1 C2 U3 G4 U5 C6 A7 U8
Unit 6 C-3 A-2 U-1 U0 C1 A2 G3 U4 U5 C6 U7

Ligands
Unit 7 MG101
Unit 8 MG101

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany