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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF MOR04357, A NEUTRALIZING ANTI-HUMAN GM- ANTIBODY FAB FRAGMENT IN COMPLEX WITH HUMAN GM-CSF
Keywords GM-CSF, AFFINITY MATURATION, PHAGE DISPLAY, CYTOKINE, ANTIBO PROTEROS BIOSTRUCTURES GMBH, IMMUNE SYSTEM
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5C7X     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   GRANULOCYTE-MACROPHAGE COLONY-STIMULATING FACTOR  A 115 926 0
2  Protein   GRANULOCYTE-MACROPHAGE COLONY-STIMULATING FACTOR  B 116 934 0
3  Protein   IMMUNGLOBULIN G1 FAB FRAGMENT, HEAVY CHAIN  H 214 1594 0
4  Protein   IMMUNGLOBULIN G1 FAB FRAGMENT, LIGHT CHAIN  L 206 1542 0
5  Protein   IMMUNGLOBULIN G1 FAB FRAGMENT, HEAVY CHAIN  M 213 1585 0
6  Protein   IMMUNGLOBULIN G1 FAB FRAGMENT, LIGHT CHAIN  N 201 1510 0
7  Ligand   IMMUNGLOBULIN G1 FAB FRAGMENT, HEAVY CHAIN  H 2 0 20
8  Ligand   IMMUNGLOBULIN G1 FAB FRAGMENT, LIGHT CHAIN  L 2 0 25
9  Ligand   IMMUNGLOBULIN G1 FAB FRAGMENT, HEAVY CHAIN  M 1 0 7
10  Ligand   IMMUNGLOBULIN G1 FAB FRAGMENT, LIGHT CHAIN  N 1 0 7
11 Water     34 0 34
total       1105 8091 93

Proteins
Unit 1 SER9 THR10 GLN11 PRO12 TRP13 GLU14 HIS15 VAL16 ASN17 ALA18 ILE19 GLN20 GLU21 ALA22 ARG23 ARG24 LEU25 LEU26 ASN27 LEU28 SER29 ARG30 THR32 ALA33 ALA34 GLU35 MET36 ASN37 GLU38 THR39 VAL40 GLU41 VAL42 ILE43 SER44 GLU45 MET46 PHE47 ASP48 LEU49 GLN50 GLU51 PRO52 THR53 CYS54 LEU55 GLN56 THR57 ARG58 LEU59 GLU60 LEU61 TYR62 LYS63 GLN64 GLY65 LEU66 ARG67 GLY68 SER69 LEU70 THR71 LYS72 LEU73 LYS74 GLY75 PRO76 LEU77 THR78 MET79 MET80 ALA81 SER82 HIS83 TYR84 LYS85 GLN86 HIS87 CYS88 PRO89 PRO90 THR91 PRO92 GLU93 THR94 SER95 CYS96 ALA97 THR98 GLN99 ILE100 ILE101 THR102 PHE103 GLU104 SER105 PHE106 LYS107 GLU108 ASN109 LEU110 LYS111 ASP112 PHE113 LEU114 LEU115 VAL116 ILE117 PRO118 PHE119 ASP120 CYS121 TRP122 GLU123 PRO124
Unit 2 SER9 THR10 GLN11 PRO12 TRP13 GLU14 HIS15 VAL16 ASN17 ALA18 ILE19 GLN20 GLU21 ALA22 ARG23 ARG24 LEU25 LEU26 ASN27 LEU28 SER29 ARG30 ASP31 THR32 ALA33 ALA34 GLU35 MET36 ASN37 GLU38 THR39 VAL40 GLU41 VAL42 ILE43 SER44 GLU45 MET46 PHE47 ASP48 LEU49 GLN50 GLU51 PRO52 THR53 CYS54 LEU55 GLN56 THR57 ARG58 LEU59 GLU60 LEU61 TYR62 LYS63 GLN64 GLY65 LEU66 ARG67 GLY68 SER69 LEU70 THR71 LYS72 LEU73 LYS74 GLY75 PRO76 LEU77 THR78 MET79 MET80 ALA81 SER82 HIS83 TYR84 LYS85 GLN86 HIS87 CYS88 PRO89 PRO90 THR91 PRO92 GLU93 THR94 SER95 CYS96 ALA97 THR98 GLN99 ILE100 ILE101 THR102 PHE103 GLU104 SER105 PHE106 LYS107 GLU108 ASN109 LEU110 LYS111 ASP112 PHE113 LEU114 LEU115 VAL116 ILE117 PRO118 PHE119 ASP120 CYS121 TRP122 GLU123 PRO124
Unit 3 GLN1 VAL2 GLN3 LEU4 VAL5 GLU6 SER7 GLY8 GLY9 GLY10 LEU11 VAL12 GLN13 PRO14 GLY15 GLY16 SER17 LEU18 ARG19 LEU20 SER21 CYS22 ALA23 ALA24 SER25 GLY26 PHE27 THR28 PHE29 SER30 SER31 TYR32 TRP33 MET34 ASN35 TRP36 VAL37 ARG38 GLN39 ALA40 PRO41 GLY42 LYS43 GLY44 LEU45 GLU46 TRP47 VAL48 SER49 GLY50 ILE51 GLU52 ASN52A LYS52B TYR52C ALA53 GLY54 GLY55 ALA56 THR57 TYR58 TYR59 ALA60 ALA61 SER62 VAL63 LYS64 GLY65 ARG66 PHE67 THR68 ILE69 SER70 ARG71 ASP72 ASN73 SER74 LYS75 ASN76 THR77 LEU78 TYR79 LEU80 GLN81 MET82 ASN82A SER82B LEU82C ARG83 ALA84 GLU85 ASP86 THR87 ALA88 VAL89 TYR90 TYR91 CYS92 ALA93 ARG94 GLY95 PHE96 GLY97 THR98 ASP101 PHE102 TRP103 GLY104 GLN105 GLY106 THR107 LEU108 VAL109 THR110 VAL111 SER112 SER113 ALA114 SER115 THR116 LYS117 GLY118 PRO119 SER120 VAL121 PHE122 PRO123 LEU124 ALA125 PRO126 SER127 SER128 GLY133 GLY134 THR135 ALA136 ALA137 LEU138 GLY139 CYS140 LEU141 VAL142 LYS143 ASP144 TYR145 PHE146 PRO147 GLU148 PRO149 VAL150 THR151 VAL152 SER153 TRP154 ASN155 SER156 GLY157 ALA158 LEU159 THR160 SER161 GLY162 VAL163 HIS164 THR165 PHE166 PRO167 ALA168 VAL169 LEU170 GLN171 SER172 SER173 GLY174 LEU175 TYR176 SER177 LEU178 SER179 SER180 VAL181 VAL182 THR183 VAL184 PRO185 SER186 SER187 SER188 LEU189 GLY190 THR191 GLN192 THR193 TYR194 ILE195 CYS196 ASN197 VAL198 ASN199 HIS200 LYS201 PRO202 SER203 ASN204 THR205 LYS206 VAL207 ASP208 LYS209 LYS210 VAL211 GLU212 PRO213 LYS214
Unit 4 ASP1 ILE2 GLU3 LEU4 THR5 GLN6 PRO7 PRO8 SER9 VAL11 SER12 VAL13 ALA14 PRO15 GLY16 GLN17 THR18 ALA19 ARG20 ILE21 SER22 CYS23 SER24 GLY25 ASP26 SER27 ILE28 GLY29 LYS30 LYS31 TYR32 ALA33 TYR34 TRP35 TYR36 GLN37 GLN38 LYS39 PRO40 GLY41 GLN42 ALA43 PRO44 VAL45 LEU46 VAL47 ILE48 TYR49 LYS50 LYS51 ARG52 PRO53 SER54 GLY57 ILE58 PRO59 GLU60 ARG61 PHE62 SER63 GLY64 SER65 ASN66 SER67 GLY68 ASN69 THR70 ALA71 THR72 LEU73 THR74 ILE75 SER76 GLY77 THR78 GLN79 ALA80 GLU81 ASP82 GLU83 ALA84 ASP85 TYR86 TYR87 CYS88 SER89 ALA90 TRP91 GLY92 ASP93 LYS94 GLY95 MET96 VAL97 PHE98 GLY99 GLY100 GLY101 THR102 LYS103 LEU104 THR105 VAL106 LEU106A GLY107 GLN108 PRO109 LYS110 ALA111 ALA112 PRO113 SER114 VAL115 THR116 LEU117 PHE118 PRO119 PRO120 SER121 SER122 GLU123 GLU124 LEU125 GLN126 ALA127 ASN128 LYS129 ALA130 THR131 LEU132 VAL133 CYS134 LEU135 ILE136 SER137 ASP138 PHE139 TYR140 PRO141 GLY142 ALA143 VAL144 THR145 VAL146 ALA147 TRP148 LYS149 ALA150 ASP151 SER152 SER153 PRO154 VAL155 LYS156 ALA157 GLY158 VAL159 GLU160 THR161 THR162 THR163 PRO164 SER165 LYS166 GLN167 SER168 ASN169 ASN170 LYS171 TYR172 ALA173 ALA174 SER175 SER176 TYR177 LEU178 SER179 LEU180 THR181 PRO182 GLU183 GLN184 TRP185 LYS186 SER187 HIS188 ARG189 SER190 TYR191 SER192 CYS193 GLN194 VAL195 THR196 HIS197 GLU198 GLY199 SER200 THR201 VAL202 GLU203 LYS204 THR205 VAL206 ALA207 PRO208
Unit 5 GLN1 VAL2 GLN3 LEU4 VAL5 GLU6 SER7 GLY8 GLY9 GLY10 LEU11 VAL12 GLN13 PRO14 GLY15 GLY16 SER17 LEU18 ARG19 LEU20 SER21 CYS22 ALA23 ALA24 SER25 GLY26 PHE27 THR28 PHE29 SER30 SER31 TYR32 TRP33 MET34 ASN35 TRP36 VAL37 ARG38 GLN39 ALA40 PRO41 GLY42 LYS43 GLY44 LEU45 GLU46 TRP47 VAL48 SER49 GLY50 ILE51 GLU52 ASN52A LYS52B TYR52C ALA53 GLY54 GLY55 ALA56 THR57 TYR58 TYR59 ALA60 ALA61 SER62 VAL63 LYS64 GLY65 ARG66 PHE67 THR68 ILE69 SER70 ARG71 ASP72 ASN73 SER74 LYS75 ASN76 THR77 LEU78 TYR79 LEU80 GLN81 MET82 ASN82A SER82B LEU82C ARG83 ALA84 GLU85 ASP86 THR87 ALA88 VAL89 TYR90 TYR91 CYS92 ALA93 ARG94 GLY95 PHE96 GLY97 THR98 ASP101 PHE102 TRP103 GLY104 GLN105 GLY106 THR107 LEU108 VAL109 THR110 VAL111 SER112 SER113 ALA114 SER115 THR116 LYS117 GLY118 PRO119 SER120 VAL121 PHE122 PRO123 LEU124 ALA125 PRO126 SER127 SER128 GLY133 GLY134 THR135 ALA136 ALA137 LEU138 GLY139 CYS140 LEU141 VAL142 LYS143 ASP144 TYR145 PHE146 PRO147 GLU148 PRO149 VAL150 THR151 VAL152 SER153 TRP154 ASN155 SER156 GLY157 ALA158 LEU159 THR160 SER161 GLY162 VAL163 HIS164 THR165 PHE166 PRO167 ALA168 VAL169 LEU170 GLN171 SER172 SER173 GLY174 LEU175 TYR176 SER177 LEU178 SER179 SER180 VAL181 VAL182 THR183 VAL184 PRO185 SER186 SER187 SER188 LEU189 GLY190 THR191 GLN192 THR193 TYR194 ILE195 CYS196 ASN197 VAL198 ASN199 HIS200 LYS201 PRO202 SER203 ASN204 THR205 LYS206 VAL207 ASP208 LYS209 LYS210 VAL211 GLU212 PRO213
Unit 6 ASP1 ILE2 GLU3 LEU4 THR5 GLN6 PRO7 PRO8 SER9 VAL11 SER12 VAL13 ALA14 PRO15 GLY16 GLN17 THR18 ALA19 ARG20 ILE21 SER22 CYS23 SER24 GLY25 ASP26 SER27 ILE28 GLY29 LYS30 LYS31 TYR32 ALA33 TYR34 TRP35 TYR36 GLN37 GLN38 LYS39 PRO40 GLY41 GLN42 ALA43 PRO44 VAL45 LEU46 VAL47 ILE48 TYR49 LYS50 LYS51 ARG52 GLU60 ARG61 PHE62 SER63 GLY64 SER65 ASN66 SER67 GLY68 ASN69 THR70 ALA71 THR72 LEU73 THR74 ILE75 SER76 GLY77 THR78 GLN79 ALA80 GLU81 ASP82 GLU83 ALA84 ASP85 TYR86 TYR87 CYS88 SER89 ALA90 TRP91 GLY92 ASP93 LYS94 GLY95 MET96 VAL97 PHE98 GLY99 GLY100 GLY101 THR102 LYS103 LEU104 THR105 VAL106 LEU106A GLY107 GLN108 PRO109 LYS110 ALA111 ALA112 PRO113 SER114 VAL115 THR116 LEU117 PHE118 PRO119 PRO120 SER121 SER122 GLU123 GLU124 LEU125 GLN126 ALA127 ASN128 LYS129 ALA130 THR131 LEU132 VAL133 CYS134 LEU135 ILE136 SER137 ASP138 PHE139 TYR140 PRO141 GLY142 ALA143 VAL144 THR145 VAL146 ALA147 TRP148 LYS149 ALA150 ASP151 SER152 SER153 PRO154 VAL155 LYS156 ALA157 GLY158 VAL159 GLU160 THR161 THR162 THR163 PRO164 SER165 LYS166 GLN167 SER168 ASN169 ASN170 LYS171 TYR172 ALA173 ALA174 SER175 SER176 TYR177 LEU178 SER179 LEU180 THR181 PRO182 GLU183 GLN184 TRP185 LYS186 SER187 HIS188 ARG189 SER190 TYR191 SER192 CYS193 GLN194 VAL195 THR196 HIS197 GLU198 GLY199 SER200 THR201 VAL202 GLU203 LYS204 THR205 VAL206 ALA207 PRO208

Ligands
Unit 7 PGE301 PGE302
Unit 8 PEG301 PG6302
Unit 9 PEG301
Unit 10 PEG301

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany