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| Title | SEMISYNTHETIC [FEFE]-HYDROGENASE CPI WITH PROPANE-DITHIOLATO [2FE] COFACTOR | |
| Keywords | HYDROGENASE, H-CLUSTER, OXIDOREDUCTASE, SEMISYNTHETIC ENZYME | |
| Experiment | X-ray diffraction | |
| Number of Models | 1 |
| Database | ID code | Status | Coordinate files | ||
| Header | Asymmetric unit | Biological unit | |||
| PDB | 5BYR | released | available | available | Quaternary Structure Server |
| Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
|---|---|---|---|---|---|---|
| 1 | Protein | IRON HYDROGENASE 1 | A | 571 | 8825 | 0 |
| 2 | Protein | IRON HYDROGENASE 1 | B | 572 | 8849 | 0 |
| 3 | Ligand | IRON HYDROGENASE 1 | A | 11 | 0 | 84 |
| 4 | Ligand | IRON HYDROGENASE 1 | B | 8 | 0 | 55 |
| 5 | Water | 843 | 0 | 843 | ||
| total | 2005 | 17674 | 982 |
| Unit 1 | LYS2 THR3 ILE4 ILE5 ILE6 ASN7 GLY8 VAL9 GLN10 PHE11 ASN12 THR13 ASP14 GLU15 ASP16 THR17 THR18 ILE19 LEU20 LYS21 PHE22 ALA23 ARG24 ASP25 ASN26 ASN27 ILE28 ASP29 ILE30 SER31 ALA32 LEU33 CYS34 PHE35 LEU36 ASN37 ASN38 CYS39 ASN40 ASN41 ASP42 ILE43 ASN44 LYS45 CYS46 GLU47 ILE48 CYS49 THR50 VAL51 GLU52 VAL53 GLU54 GLY55 THR56 GLY57 LEU58 VAL59 THR60 ALA61 CYS62 ASP63 THR64 LEU65 ILE66 GLU67 ASP68 GLY69 MET70 ILE71 ILE72 ASN73 THR74 ASN75 SER76 ASP77 ALA78 VAL79 ASN80 GLU81 LYS82 ILE83 LYS84 SER85 ARG86 ILE87 SER88 GLN89 LEU90 LEU91 ASP92 ILE93 HIS94 GLU95 PHE96 LYS97 CYS98 GLY99 PRO100 CYS101 ASN102 ARG103 ARG104 GLU105 ASN106 CYS107 GLU108 PHE109 LEU110 LYS111 LEU112 VAL113 ILE114 LYS115 TYR116 LYS117 ALA118 ARG119 ALA120 SER121 LYS122 PRO123 PHE124 LEU125 PRO126 LYS127 ASP128 LYS129 THR130 GLU131 TYR132 VAL133 ASP134 GLU135 ARG136 SER137 LYS138 SER139 LEU140 THR141 VAL142 ASP143 ARG144 THR145 LYS146 CYS147 LEU148 LEU149 CYS150 GLY151 ARG152 CYS153 VAL154 ASN155 ALA156 CYS157 GLY158 LYS159 ASN160 THR161 GLU162 THR163 TYR164 ALA165 MET166 LYS167 PHE168 LEU169 ASN170 LYS171 ASN172 GLY173 LYS174 THR175 ILE176 ILE177 GLY178 ALA179 GLU180 ASP181 GLU182 LYS183 CYS184 PHE185 ASP186 ASP187 THR188 ASN189 CYS190 LEU191 LEU192 CYS193 GLY194 GLN195 CYS196 ILE197 ILE198 ALA199 CYS200 PRO201 VAL202 ALA203 ALA204 LEU205 SER206 GLU207 LYS208 SER209 HIS210 MET211 ASP212 ARG213 VAL214 LYS215 ASN216 ALA217 LEU218 ASN219 ALA220 PRO221 GLU222 LYS223 HIS224 VAL225 ILE226 VAL227 ALA228 MET229 ALA230 PRO231 SER232 VAL233 ARG234 ALA235 SER236 ILE237 GLY238 GLU239 LEU240 PHE241 ASN242 MET243 GLY244 PHE245 GLY246 VAL247 ASP248 VAL249 THR250 GLY251 LYS252 ILE253 TYR254 THR255 ALA256 LEU257 ARG258 GLN259 LEU260 GLY261 PHE262 ASP263 LYS264 ILE265 PHE266 ASP267 ILE268 ASN269 PHE270 GLY271 ALA272 ASP273 MET274 THR275 ILE276 MET277 GLU278 GLU279 ALA280 THR281 GLU282 LEU283 VAL284 GLN285 ARG286 ILE287 GLU288 ASN289 ASN290 GLY291 PRO292 PHE293 PRO294 MET295 PHE296 THR297 SER298 CYS299 CYS300 PRO301 GLY302 TRP303 VAL304 ARG305 GLN306 ALA307 GLU308 ASN309 TYR310 TYR311 PRO312 GLU313 LEU314 LEU315 ASN316 ASN317 LEU318 SER319 SER320 ALA321 LYS322 SER323 PRO324 GLN325 GLN326 ILE327 PHE328 GLY329 THR330 ALA331 SER332 LYS333 THR334 TYR335 TYR336 PRO337 SER338 ILE339 SER340 GLY341 LEU342 ASP343 PRO344 LYS345 ASN346 VAL347 PHE348 THR349 VAL350 THR351 VAL352 MET353 PRO354 CYS355 THR356 SER357 LYS358 LYS359 PHE360 GLU361 ALA362 ASP363 ARG364 PRO365 GLN366 MET367 GLU368 LYS369 ASP370 GLY371 LEU372 ARG373 ASP374 ILE375 ASP376 ALA377 VAL378 ILE379 THR380 THR381 ARG382 GLU383 LEU384 ALA385 LYS386 MET387 ILE388 LYS389 ASP390 ALA391 LYS392 ILE393 PRO394 PHE395 ALA396 LYS397 LEU398 GLU399 ASP400 SER401 GLU402 ALA403 ASP404 PRO405 ALA406 MET407 GLY408 GLU409 TYR410 SER411 GLY412 ALA413 GLY414 ALA415 ILE416 PHE417 GLY418 ALA419 THR420 GLY421 GLY422 VAL423 MET424 GLU425 ALA426 ALA427 LEU428 ARG429 SER430 ALA431 LYS432 ASP433 PHE434 ALA435 GLU436 ASN437 ALA438 GLU439 LEU440 GLU441 ASP442 ILE443 GLU444 TYR445 LYS446 GLN447 VAL448 ARG449 GLY450 LEU451 ASN452 GLY453 ILE454 LYS455 GLU456 ALA457 GLU458 VAL459 GLU460 ILE461 ASN462 ASN463 ASN464 LYS465 TYR466 ASN467 VAL468 ALA469 VAL470 ILE471 ASN472 GLY473 ALA474 SER475 ASN476 LEU477 PHE478 LYS479 PHE480 MET481 LYS482 SER483 GLY484 MET485 ILE486 ASN487 GLU488 LYS489 GLN490 TYR491 HIS492 PHE493 ILE494 GLU495 VAL496 MET497 ALA498 CYS499 HIS500 GLY501 GLY502 CYS503 VAL504 ASN505 GLY506 GLY507 GLY508 GLN509 PRO510 HIS511 VAL512 ASN513 PRO514 LYS515 ASP516 LEU517 GLU518 LYS519 VAL520 ASP521 ILE522 LYS523 LYS524 VAL525 ARG526 ALA527 SER528 VAL529 LEU530 TYR531 ASN532 GLN533 ASP534 GLU535 HIS536 LEU537 SER538 LYS539 ARG540 LYS541 SER542 HIS543 GLU544 ASN545 THR546 ALA547 LEU548 VAL549 LYS550 MET551 TYR552 GLN553 ASN554 TYR555 PHE556 GLY557 LYS558 PRO559 GLY560 GLU561 GLY562 ARG563 ALA564 HIS565 GLU566 ILE567 LEU568 HIS569 PHE570 LYS571 TYR572 |
| Unit 2 | LYS2 THR3 ILE4 ILE5 ILE6 ASN7 GLY8 VAL9 GLN10 PHE11 ASN12 THR13 ASP14 GLU15 ASP16 THR17 THR18 ILE19 LEU20 LYS21 PHE22 ALA23 ARG24 ASP25 ASN26 ASN27 ILE28 ASP29 ILE30 SER31 ALA32 LEU33 CYS34 PHE35 LEU36 ASN37 ASN38 CYS39 ASN40 ASN41 ASP42 ILE43 ASN44 LYS45 CYS46 GLU47 ILE48 CYS49 THR50 VAL51 GLU52 VAL53 GLU54 GLY55 THR56 GLY57 LEU58 VAL59 THR60 ALA61 CYS62 ASP63 THR64 LEU65 ILE66 GLU67 ASP68 GLY69 MET70 ILE71 ILE72 ASN73 THR74 ASN75 SER76 ASP77 ALA78 VAL79 ASN80 GLU81 LYS82 ILE83 LYS84 SER85 ARG86 ILE87 SER88 GLN89 LEU90 LEU91 ASP92 ILE93 HIS94 GLU95 PHE96 LYS97 CYS98 GLY99 PRO100 CYS101 ASN102 ARG103 ARG104 GLU105 ASN106 CYS107 GLU108 PHE109 LEU110 LYS111 LEU112 VAL113 ILE114 LYS115 TYR116 LYS117 ALA118 ARG119 ALA120 SER121 LYS122 PRO123 PHE124 LEU125 PRO126 LYS127 ASP128 LYS129 THR130 GLU131 TYR132 VAL133 ASP134 GLU135 ARG136 SER137 LYS138 SER139 LEU140 THR141 VAL142 ASP143 ARG144 THR145 LYS146 CYS147 LEU148 LEU149 CYS150 GLY151 ARG152 CYS153 VAL154 ASN155 ALA156 CYS157 GLY158 LYS159 ASN160 THR161 GLU162 THR163 TYR164 ALA165 MET166 LYS167 PHE168 LEU169 ASN170 LYS171 ASN172 GLY173 LYS174 THR175 ILE176 ILE177 GLY178 ALA179 GLU180 ASP181 GLU182 LYS183 CYS184 PHE185 ASP186 ASP187 THR188 ASN189 CYS190 LEU191 LEU192 CYS193 GLY194 GLN195 CYS196 ILE197 ILE198 ALA199 CYS200 PRO201 VAL202 ALA203 ALA204 LEU205 SER206 GLU207 LYS208 SER209 HIS210 MET211 ASP212 ARG213 VAL214 LYS215 ASN216 ALA217 LEU218 ASN219 ALA220 PRO221 GLU222 LYS223 HIS224 VAL225 ILE226 VAL227 ALA228 MET229 ALA230 PRO231 SER232 VAL233 ARG234 ALA235 SER236 ILE237 GLY238 GLU239 LEU240 PHE241 ASN242 MET243 GLY244 PHE245 GLY246 VAL247 ASP248 VAL249 THR250 GLY251 LYS252 ILE253 TYR254 THR255 ALA256 LEU257 ARG258 GLN259 LEU260 GLY261 PHE262 ASP263 LYS264 ILE265 PHE266 ASP267 ILE268 ASN269 PHE270 GLY271 ALA272 ASP273 MET274 THR275 ILE276 MET277 GLU278 GLU279 ALA280 THR281 GLU282 LEU283 VAL284 GLN285 ARG286 ILE287 GLU288 ASN289 ASN290 GLY291 PRO292 PHE293 PRO294 MET295 PHE296 THR297 SER298 CYS299 CYS300 PRO301 GLY302 TRP303 VAL304 ARG305 GLN306 ALA307 GLU308 ASN309 TYR310 TYR311 PRO312 GLU313 LEU314 LEU315 ASN316 ASN317 LEU318 SER319 SER320 ALA321 LYS322 SER323 PRO324 GLN325 GLN326 ILE327 PHE328 GLY329 THR330 ALA331 SER332 LYS333 THR334 TYR335 TYR336 PRO337 SER338 ILE339 SER340 GLY341 LEU342 ASP343 PRO344 LYS345 ASN346 VAL347 PHE348 THR349 VAL350 THR351 VAL352 MET353 PRO354 CYS355 THR356 SER357 LYS358 LYS359 PHE360 GLU361 ALA362 ASP363 ARG364 PRO365 GLN366 MET367 GLU368 LYS369 ASP370 GLY371 LEU372 ARG373 ASP374 ILE375 ASP376 ALA377 VAL378 ILE379 THR380 THR381 ARG382 GLU383 LEU384 ALA385 LYS386 MET387 ILE388 LYS389 ASP390 ALA391 LYS392 ILE393 PRO394 PHE395 ALA396 LYS397 LEU398 GLU399 ASP400 SER401 GLU402 ALA403 ASP404 PRO405 ALA406 MET407 GLY408 GLU409 TYR410 SER411 GLY412 ALA413 GLY414 ALA415 ILE416 PHE417 GLY418 ALA419 THR420 GLY421 GLY422 VAL423 MET424 GLU425 ALA426 ALA427 LEU428 ARG429 SER430 ALA431 LYS432 ASP433 PHE434 ALA435 GLU436 ASN437 ALA438 GLU439 LEU440 GLU441 ASP442 ILE443 GLU444 TYR445 LYS446 GLN447 VAL448 ARG449 GLY450 LEU451 ASN452 GLY453 ILE454 LYS455 GLU456 ALA457 GLU458 VAL459 GLU460 ILE461 ASN462 ASN463 ASN464 LYS465 TYR466 ASN467 VAL468 ALA469 VAL470 ILE471 ASN472 GLY473 ALA474 SER475 ASN476 LEU477 PHE478 LYS479 PHE480 MET481 LYS482 SER483 GLY484 MET485 ILE486 ASN487 GLU488 LYS489 GLN490 TYR491 HIS492 PHE493 ILE494 GLU495 VAL496 MET497 ALA498 CYS499 HIS500 GLY501 GLY502 CYS503 VAL504 ASN505 GLY506 GLY507 GLY508 GLN509 PRO510 HIS511 VAL512 ASN513 PRO514 LYS515 ASP516 LEU517 GLU518 LYS519 VAL520 ASP521 ILE522 LYS523 LYS524 VAL525 ARG526 ALA527 SER528 VAL529 LEU530 TYR531 ASN532 GLN533 ASP534 GLU535 HIS536 LEU537 SER538 LYS539 ARG540 LYS541 SER542 HIS543 GLU544 ASN545 THR546 ALA547 LEU548 VAL549 LYS550 MET551 TYR552 GLN553 ASN554 TYR555 PHE556 GLY557 LYS558 PRO559 GLY560 GLU561 GLY562 ARG563 ALA564 HIS565 GLU566 ILE567 LEU568 HIS569 PHE570 LYS571 TYR572 LYS573 |
| Unit 3 | SF4601 SF4602 SF4603 SF4604 FES605 4WW606 MG607 MG608 MG609 GOL610 GOL611 |
| Unit 4 | SF4601 SF4602 SF4603 SF4604 FES605 4WW606 MG607 MG608 |
| Perl script: | PDBscan.pl (15 Sep 2016) |
| Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |