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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF A COMPLEX BETWEEN THE SNARE VAM3 AND TH VPS33-VPS16 SUBCOMPLEX FROM CHAETOMIUM THERMOPHILUM
Keywords MEMBRANE TRAFFICKING, SM PROTEIN, HOPS COMPLEX, THERMOPHILE, DOMAIN, TRANSPORT PROTEIN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5BUZ     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   SM (SEC1/MUNC18-LIKE) PROTEIN  A 605 4770 0
2  Protein    B 324 2583 0
3  Protein   SNAP RECEPTOR-LIKE PROTEIN  C 38 275 0
4  Protein   SM (SEC1/MUNC18-LIKE) PROTEIN  D 605 4770 0
5  Protein    E 324 2583 0
6  Protein   SNAP RECEPTOR-LIKE PROTEIN  F 40 295 0
total       1936 15276 0

Proteins
Unit 1 ALA5 GLY6 PHE7 ASP8 ALA9 GLU10 GLN11 VAL12 ARG13 ASP14 LYS15 ALA16 ARG17 LYS18 ASP19 LEU20 LEU21 HIS22 LEU23 LEU24 GLU25 GLY26 VAL27 ARG28 GLY29 LYS30 LYS31 ASN32 LEU33 VAL34 ILE35 GLU36 LYS37 ASP38 LEU39 ALA40 GLY41 PRO42 LEU43 GLY44 VAL45 ILE46 VAL47 LYS48 ALA49 SER50 THR51 LEU52 ARG53 ASP54 TYR55 GLY56 VAL57 ASP58 ASN59 PHE60 PHE61 PHE62 LEU63 GLU64 ASN65 LYS66 ASN67 THR68 GLY69 THR70 SER71 GLN72 ARG73 ASN74 ILE75 VAL76 PHE77 ILE78 ALA79 ARG80 GLY81 GLU82 SER83 VAL84 ARG85 ASN86 ALA87 HIS88 ALA89 ILE90 ALA91 ALA92 GLN93 ILE94 LYS95 ARG96 ILE97 GLN98 ARG99 GLU100 SER101 GLN102 THR103 SER104 HIS105 ASP106 PHE107 HIS108 ILE109 PHE110 TRP111 VAL112 PRO113 ARG114 ARG115 THR116 LEU117 PHE118 SER119 ASP120 LYS121 VAL122 LEU123 GLU124 GLU125 ALA126 GLY127 VAL128 LEU129 GLY130 ASP131 ALA132 ASN133 ILE134 SER135 GLU136 LEU137 PRO138 LEU139 TYR140 PHE141 PHE142 PRO143 LEU144 GLU145 ARG146 ASP147 VAL148 LEU149 SER150 LEU151 GLU152 LEU153 ASN154 ASP155 SER156 PHE157 ARG158 ASP159 LEU160 TYR161 LEU162 ALA163 LYS164 ASP165 PRO166 THR167 PRO168 VAL169 PHE170 LEU171 LEU172 SER173 ARG174 ALA175 LEU176 MET177 GLY178 ILE179 GLN180 LYS181 LYS182 HIS183 GLY184 LEU185 PHE186 PRO187 ARG188 ILE189 ILE190 GLY191 LYS192 GLY193 GLU194 ASN195 ALA196 LYS197 ARG198 VAL199 ALA200 ASP201 LEU202 LEU203 SER204 ARG205 MET206 ARG207 GLN208 GLU209 LEU210 LEU211 ALA212 GLY213 GLU214 GLU215 ALA216 GLY217 GLU218 SER219 ASP220 ARG221 ALA222 GLY223 LEU224 SER225 PRO226 SER227 THR228 THR229 ILE230 GLU231 SER232 VAL233 ILE234 ILE235 ILE236 ASP237 ARG238 GLU239 VAL240 ASP241 PHE242 VAL243 THR244 PRO245 LEU246 LEU247 THR248 GLN249 LEU250 THR251 TYR252 GLU253 GLY254 LEU255 ILE256 ASP257 GLU258 TYR259 PHE260 GLY261 ILE262 GLN263 ASN264 ASN265 GLN266 THR267 ASP268 VAL269 ASP270 ALA271 VAL272 ARG296 LYS297 ARG298 LYS299 ILE300 GLN301 LEU302 ASP303 GLY304 SER305 ASP306 SER307 LEU308 TYR309 SER310 GLN311 LEU312 ARG313 ASP314 ALA315 ASN316 PHE317 ALA318 ILE319 VAL320 GLY321 SER322 LEU323 LEU324 ASN325 THR326 VAL327 ALA328 ARG329 ARG330 LEU331 LYS332 SER333 ASP334 TYR335 GLU336 SER337 ARG338 HIS339 ASN340 THR341 LYS342 THR343 THR344 ALA345 GLU346 LEU347 LYS348 GLU349 PHE350 VAL351 LYS352 LYS353 LEU354 PRO355 GLY356 TYR357 GLN358 ALA359 GLU360 GLN361 GLN362 SER363 LEU364 LYS365 ILE366 HIS367 SER368 ASN369 ILE370 ALA371 GLU372 GLU373 ILE374 ILE375 ASN376 TYR377 THR378 ARG379 THR380 GLU381 ILE382 PHE383 ASN384 LYS385 LEU386 LEU387 GLU388 VAL389 GLN390 GLN391 ASN392 LEU393 ALA394 ALA395 GLY396 ALA397 ASP398 PRO399 SER400 SER401 GLN402 PHE403 ASP404 SER405 ILE406 GLU407 GLU408 LEU409 VAL410 ALA411 ARG412 ASP413 THR414 PRO415 LEU416 PRO417 GLN418 VAL419 LEU420 ARG421 LEU422 LEU423 CYS424 LEU425 TYR426 SER427 CYS428 ILE429 SER430 GLY431 GLY432 ILE433 LYS434 THR435 LYS436 GLU437 LEU438 ASP439 HIS440 PHE441 ARG442 ARG443 LEU444 VAL445 LEU446 GLN447 GLY448 TYR449 GLY450 HIS451 GLN452 HIS453 LEU454 LEU455 THR456 LEU457 HIS458 ASN459 LEU460 GLU461 ARG462 LEU463 GLN464 MET465 PHE466 LEU467 SER468 LYS469 SER470 SER471 PRO472 LEU473 ALA474 SER475 MET476 ILE477 THR478 MET479 SER480 GLY481 SER482 SER483 GLY484 GLY485 PRO486 ASP487 GLN488 LYS489 THR490 ASN491 TYR492 THR493 TYR494 LEU495 ARG496 LYS497 GLN498 LEU499 ARG500 LEU501 ILE502 VAL503 ASP504 GLU505 VAL506 ASN507 GLU508 GLN509 ASP510 PRO511 ASN512 ASP513 ILE514 ALA515 TYR516 VAL517 TYR518 SER519 GLY520 TYR521 ALA522 PRO523 LEU524 SER525 ILE526 ARG527 LEU528 VAL529 GLN530 CYS531 VAL532 LEU533 GLN534 LYS535 GLN536 TYR537 LEU538 LEU539 SER540 ILE541 THR542 LYS543 GLY544 SER545 GLY556 GLY557 GLY558 ALA559 GLN560 GLY561 TRP562 LYS563 GLY564 PHE565 GLU566 GLU567 ILE568 VAL569 LYS570 HIS571 ALA572 ARG573 GLY574 PRO575 THR576 PHE577 ASP578 GLU579 ILE580 GLN581 LYS582 GLY599 ASP600 LYS601 LYS602 THR603 VAL604 PHE605 VAL606 VAL607 PHE608 VAL609 GLY610 GLY611 ILE612 THR613 PHE614 THR615 GLU616 ILE617 ALA618 ALA619 LEU620 ARG621 PHE622 ILE623 ALA624 LYS625 GLN626 GLU627 GLU628 ALA629 ARG630 ARG631 ASN632 ILE633 VAL634 ILE635 CYS636 THR637 THR638 SER639 ILE640 ILE641 ASN642 GLY643 ASN644 ARG645 MET646 MET647 ASN648 ALA649 ALA650 ILE651 GLU652 THR653 ALA654 THR655 PHE656 GLU657 LYS658
Unit 2 SER505 PHE506 GLU507 VAL508 ILE509 ALA510 ARG511 THR512 ALA513 TYR514 GLU515 GLU516 GLY517 ARG518 THR519 ARG520 LEU521 ALA522 THR523 GLU524 LEU525 LEU526 ASN527 HIS528 GLU529 PRO530 ARG531 ALA532 GLY533 ARG534 GLN535 VAL536 PRO537 LEU538 LEU539 LEU540 SER541 MET542 GLU543 GLU544 ASP545 GLU546 LEU547 ALA548 LEU549 ASP550 LYS551 ALA552 ILE553 GLU554 SER555 GLY556 ASP557 THR558 ASP559 LEU560 ILE561 TYR562 PHE563 VAL564 ILE565 HIS566 GLN567 LEU568 ARG569 ARG570 LYS571 LEU572 PRO573 LEU574 ALA575 SER576 PHE577 PHE578 ARG579 VAL580 VAL581 SER582 SER583 ARG584 PRO585 THR586 ALA587 SER588 ALA589 MET590 VAL591 GLU592 ALA593 LEU594 ALA595 ARG596 ASN597 SER598 ASP599 GLY600 ASP601 GLY602 ASN603 GLU604 ASP605 THR606 ALA607 LEU608 LEU609 LYS610 ASP611 LEU612 TYR613 TYR614 GLN615 ASP616 ASP617 ARG618 ARG619 LEU620 ASP621 GLY622 ALA623 SER624 VAL625 PHE626 ILE627 ARG628 GLU629 ALA630 LEU631 GLN632 GLN633 PRO634 GLU635 THR636 ARG637 THR638 ALA639 SER640 ASP641 LYS642 LEU643 ASP644 LEU645 ALA646 ALA647 ASN648 LEU649 LEU650 GLN651 GLY652 ASN653 GLN654 LYS655 GLU656 HIS657 VAL658 PHE659 GLU660 LEU661 GLY662 ALA663 LEU664 LYS665 GLU666 ALA667 LYS668 MET669 LEU670 LEU671 ARG672 MET673 GLN674 GLU675 THR676 PHE677 GLU678 ARG679 ASP680 LEU681 THR682 ASP683 SER684 PHE685 VAL686 GLY687 LEU688 SER689 VAL690 ASN691 GLN692 THR693 MET694 PHE695 LYS696 LEU697 ILE698 LYS699 LEU700 GLY701 TYR702 HIS703 GLY704 ARG705 ALA706 LYS707 LYS708 ILE709 GLN710 SER711 GLU712 PHE713 LYS714 VAL715 PRO716 GLU717 ARG718 VAL719 ALA720 TRP721 TRP722 ILE723 ARG724 LEU725 GLN726 ALA727 LEU728 VAL729 ALA730 LYS731 ARG732 ASP733 TRP734 ASN735 GLU736 ILE737 GLU738 GLU739 ILE740 SER741 ARG742 GLN743 ARG744 LYS745 SER746 PRO747 ILE748 GLY749 TRP750 GLU751 PRO752 PHE753 PHE754 ASN755 GLN756 VAL757 LEU758 GLN759 ALA760 GLY761 ASN762 PRO763 ARG764 LEU765 ALA766 ALA767 THR768 PHE769 ILE770 PRO771 LYS772 CYS773 THR774 ASN775 LEU776 GLU777 PRO778 GLY779 GLN780 THR781 ILE782 THR783 MET784 TYR785 GLU786 LYS787 CYS788 GLY789 MET790 ARG791 VAL792 LYS793 ALA794 ALA795 GLU796 GLU797 ALA798 VAL799 ARG800 LEU801 LYS802 ASP803 THR804 GLU805 ALA806 TRP807 ASN808 ARG809 LEU810 LEU811 GLU812 ALA813 ALA814 GLY815 ARG816 ASN817 THR818 ALA819 GLU820 GLY821 ARG822 GLU823 ILE824 GLU825 ARG826 LEU827 GLY828
Unit 3 GLU188 ILE189 ARG190 ASN191 ILE192 GLU193 GLN194 GLY195 VAL196 SER197 ASP198 LEU199 ASN200 VAL201 LEU202 PHE203 GLN204 GLN205 VAL206 ALA207 GLN208 LEU209 VAL210 ALA211 GLU212 GLN213 GLY214 GLU215 VAL216 LEU217 ASP218 THR219 ILE220 GLU221 ARG222 ASN223 VAL224 GLU225
Unit 4 ALA5 GLY6 PHE7 ASP8 ALA9 GLU10 GLN11 VAL12 ARG13 ASP14 LYS15 ALA16 ARG17 LYS18 ASP19 LEU20 LEU21 HIS22 LEU23 LEU24 GLU25 GLY26 VAL27 ARG28 GLY29 LYS30 LYS31 ASN32 LEU33 VAL34 ILE35 GLU36 LYS37 ASP38 LEU39 ALA40 GLY41 PRO42 LEU43 GLY44 VAL45 ILE46 VAL47 LYS48 ALA49 SER50 THR51 LEU52 ARG53 ASP54 TYR55 GLY56 VAL57 ASP58 ASN59 PHE60 PHE61 PHE62 LEU63 GLU64 ASN65 LYS66 ASN67 THR68 GLY69 THR70 SER71 GLN72 ARG73 ASN74 ILE75 VAL76 PHE77 ILE78 ALA79 ARG80 GLY81 GLU82 SER83 VAL84 ARG85 ASN86 ALA87 HIS88 ALA89 ILE90 ALA91 ALA92 GLN93 ILE94 LYS95 ARG96 ILE97 GLN98 ARG99 GLU100 SER101 GLN102 THR103 SER104 HIS105 ASP106 PHE107 HIS108 ILE109 PHE110 TRP111 VAL112 PRO113 ARG114 ARG115 THR116 LEU117 PHE118 SER119 ASP120 LYS121 VAL122 LEU123 GLU124 GLU125 ALA126 GLY127 VAL128 LEU129 GLY130 ASP131 ALA132 ASN133 ILE134 SER135 GLU136 LEU137 PRO138 LEU139 TYR140 PHE141 PHE142 PRO143 LEU144 GLU145 ARG146 ASP147 VAL148 LEU149 SER150 LEU151 GLU152 LEU153 ASN154 ASP155 SER156 PHE157 ARG158 ASP159 LEU160 TYR161 LEU162 ALA163 LYS164 ASP165 PRO166 THR167 PRO168 VAL169 PHE170 LEU171 LEU172 SER173 ARG174 ALA175 LEU176 MET177 GLY178 ILE179 GLN180 LYS181 LYS182 HIS183 GLY184 LEU185 PHE186 PRO187 ARG188 ILE189 ILE190 GLY191 LYS192 GLY193 GLU194 ASN195 ALA196 LYS197 ARG198 VAL199 ALA200 ASP201 LEU202 LEU203 SER204 ARG205 MET206 ARG207 GLN208 GLU209 LEU210 LEU211 ALA212 GLY213 GLU214 GLU215 ALA216 GLY217 GLU218 SER219 ASP220 ARG221 ALA222 GLY223 LEU224 SER225 PRO226 SER227 THR228 THR229 ILE230 GLU231 SER232 VAL233 ILE234 ILE235 ILE236 ASP237 ARG238 GLU239 VAL240 ASP241 PHE242 VAL243 THR244 PRO245 LEU246 LEU247 THR248 GLN249 LEU250 THR251 TYR252 GLU253 GLY254 LEU255 ILE256 ASP257 GLU258 TYR259 PHE260 GLY261 ILE262 GLN263 ASN264 ASN265 GLN266 THR267 ASP268 VAL269 ASP270 ALA271 VAL272 ARG296 LYS297 ARG298 LYS299 ILE300 GLN301 LEU302 ASP303 GLY304 SER305 ASP306 SER307 LEU308 TYR309 SER310 GLN311 LEU312 ARG313 ASP314 ALA315 ASN316 PHE317 ALA318 ILE319 VAL320 GLY321 SER322 LEU323 LEU324 ASN325 THR326 VAL327 ALA328 ARG329 ARG330 LEU331 LYS332 SER333 ASP334 TYR335 GLU336 SER337 ARG338 HIS339 ASN340 THR341 LYS342 THR343 THR344 ALA345 GLU346 LEU347 LYS348 GLU349 PHE350 VAL351 LYS352 LYS353 LEU354 PRO355 GLY356 TYR357 GLN358 ALA359 GLU360 GLN361 GLN362 SER363 LEU364 LYS365 ILE366 HIS367 SER368 ASN369 ILE370 ALA371 GLU372 GLU373 ILE374 ILE375 ASN376 TYR377 THR378 ARG379 THR380 GLU381 ILE382 PHE383 ASN384 LYS385 LEU386 LEU387 GLU388 VAL389 GLN390 GLN391 ASN392 LEU393 ALA394 ALA395 GLY396 ALA397 ASP398 PRO399 SER400 SER401 GLN402 PHE403 ASP404 SER405 ILE406 GLU407 GLU408 LEU409 VAL410 ALA411 ARG412 ASP413 THR414 PRO415 LEU416 PRO417 GLN418 VAL419 LEU420 ARG421 LEU422 LEU423 CYS424 LEU425 TYR426 SER427 CYS428 ILE429 SER430 GLY431 GLY432 ILE433 LYS434 THR435 LYS436 GLU437 LEU438 ASP439 HIS440 PHE441 ARG442 ARG443 LEU444 VAL445 LEU446 GLN447 GLY448 TYR449 GLY450 HIS451 GLN452 HIS453 LEU454 LEU455 THR456 LEU457 HIS458 ASN459 LEU460 GLU461 ARG462 LEU463 GLN464 MET465 PHE466 LEU467 SER468 LYS469 SER470 SER471 PRO472 LEU473 ALA474 SER475 MET476 ILE477 THR478 MET479 SER480 GLY481 SER482 SER483 GLY484 GLY485 PRO486 ASP487 GLN488 LYS489 THR490 ASN491 TYR492 THR493 TYR494 LEU495 ARG496 LYS497 GLN498 LEU499 ARG500 LEU501 ILE502 VAL503 ASP504 GLU505 VAL506 ASN507 GLU508 GLN509 ASP510 PRO511 ASN512 ASP513 ILE514 ALA515 TYR516 VAL517 TYR518 SER519 GLY520 TYR521 ALA522 PRO523 LEU524 SER525 ILE526 ARG527 LEU528 VAL529 GLN530 CYS531 VAL532 LEU533 GLN534 LYS535 GLN536 TYR537 LEU538 LEU539 SER540 ILE541 THR542 LYS543 GLY544 SER545 GLY556 GLY557 GLY558 ALA559 GLN560 GLY561 TRP562 LYS563 GLY564 PHE565 GLU566 GLU567 ILE568 VAL569 LYS570 HIS571 ALA572 ARG573 GLY574 PRO575 THR576 PHE577 ASP578 GLU579 ILE580 GLN581 LYS582 GLY599 ASP600 LYS601 LYS602 THR603 VAL604 PHE605 VAL606 VAL607 PHE608 VAL609 GLY610 GLY611 ILE612 THR613 PHE614 THR615 GLU616 ILE617 ALA618 ALA619 LEU620 ARG621 PHE622 ILE623 ALA624 LYS625 GLN626 GLU627 GLU628 ALA629 ARG630 ARG631 ASN632 ILE633 VAL634 ILE635 CYS636 THR637 THR638 SER639 ILE640 ILE641 ASN642 GLY643 ASN644 ARG645 MET646 MET647 ASN648 ALA649 ALA650 ILE651 GLU652 THR653 ALA654 THR655 PHE656 GLU657 LYS658
Unit 5 SER505 PHE506 GLU507 VAL508 ILE509 ALA510 ARG511 THR512 ALA513 TYR514 GLU515 GLU516 GLY517 ARG518 THR519 ARG520 LEU521 ALA522 THR523 GLU524 LEU525 LEU526 ASN527 HIS528 GLU529 PRO530 ARG531 ALA532 GLY533 ARG534 GLN535 VAL536 PRO537 LEU538 LEU539 LEU540 SER541 MET542 GLU543 GLU544 ASP545 GLU546 LEU547 ALA548 LEU549 ASP550 LYS551 ALA552 ILE553 GLU554 SER555 GLY556 ASP557 THR558 ASP559 LEU560 ILE561 TYR562 PHE563 VAL564 ILE565 HIS566 GLN567 LEU568 ARG569 ARG570 LYS571 LEU572 PRO573 LEU574 ALA575 SER576 PHE577 PHE578 ARG579 VAL580 VAL581 SER582 SER583 ARG584 PRO585 THR586 ALA587 SER588 ALA589 MET590 VAL591 GLU592 ALA593 LEU594 ALA595 ARG596 ASN597 SER598 ASP599 GLY600 ASP601 GLY602 ASN603 GLU604 ASP605 THR606 ALA607 LEU608 LEU609 LYS610 ASP611 LEU612 TYR613 TYR614 GLN615 ASP616 ASP617 ARG618 ARG619 LEU620 ASP621 GLY622 ALA623 SER624 VAL625 PHE626 ILE627 ARG628 GLU629 ALA630 LEU631 GLN632 GLN633 PRO634 GLU635 THR636 ARG637 THR638 ALA639 SER640 ASP641 LYS642 LEU643 ASP644 LEU645 ALA646 ALA647 ASN648 LEU649 LEU650 GLN651 GLY652 ASN653 GLN654 LYS655 GLU656 HIS657 VAL658 PHE659 GLU660 LEU661 GLY662 ALA663 LEU664 LYS665 GLU666 ALA667 LYS668 MET669 LEU670 LEU671 ARG672 MET673 GLN674 GLU675 THR676 PHE677 GLU678 ARG679 ASP680 LEU681 THR682 ASP683 SER684 PHE685 VAL686 GLY687 LEU688 SER689 VAL690 ASN691 GLN692 THR693 MET694 PHE695 LYS696 LEU697 ILE698 LYS699 LEU700 GLY701 TYR702 HIS703 GLY704 ARG705 ALA706 LYS707 LYS708 ILE709 GLN710 SER711 GLU712 PHE713 LYS714 VAL715 PRO716 GLU717 ARG718 VAL719 ALA720 TRP721 TRP722 ILE723 ARG724 LEU725 GLN726 ALA727 LEU728 VAL729 ALA730 LYS731 ARG732 ASP733 TRP734 ASN735 GLU736 ILE737 GLU738 GLU739 ILE740 SER741 ARG742 GLN743 ARG744 LYS745 SER746 PRO747 ILE748 GLY749 TRP750 GLU751 PRO752 PHE753 PHE754 ASN755 GLN756 VAL757 LEU758 GLN759 ALA760 GLY761 ASN762 PRO763 ARG764 LEU765 ALA766 ALA767 THR768 PHE769 ILE770 PRO771 LYS772 CYS773 THR774 ASN775 LEU776 GLU777 PRO778 GLY779 GLN780 THR781 ILE782 THR783 MET784 TYR785 GLU786 LYS787 CYS788 GLY789 MET790 ARG791 VAL792 LYS793 ALA794 ALA795 GLU796 GLU797 ALA798 VAL799 ARG800 LEU801 LYS802 ASP803 THR804 GLU805 ALA806 TRP807 ASN808 ARG809 LEU810 LEU811 GLU812 ALA813 ALA814 GLY815 ARG816 ASN817 THR818 ALA819 GLU820 GLY821 ARG822 GLU823 ILE824 GLU825 ARG826 LEU827 GLY828
Unit 6 GLU186 GLU187 GLU188 ILE189 ARG190 ASN191 ILE192 GLU193 GLN194 GLY195 VAL196 SER197 ASP198 LEU199 ASN200 VAL201 LEU202 PHE203 GLN204 GLN205 VAL206 ALA207 GLN208 LEU209 VAL210 ALA211 GLU212 GLN213 GLY214 GLU215 VAL216 LEU217 ASP218 THR219 ILE220 GLU221 ARG222 ASN223 VAL224 GLU225

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany