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Sequence, Chains, Asymmetric and Biological Units

Title APO STRUCTURE OF TRANSCRIPTIONAL FACTOR ARAR FROM BACTEROIDE THETAIOTAOMICRON VPI
Keywords STRUCTURAL GENOMICS, PSI-BIOLOGY, MIDWEST CENTER FOR STRUCTU GENOMICS, MCSG, TRANSCRIPTIONAL REGULATOR, BACTEROIDES THETAIOTAOMICRON, HELIX-TURN-HELIX MOTIF, NUDIX FOLD, DNA B TRANSCRIPTION
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5BS6     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   TRANSCRIPTIONAL REGULATOR ARAR  A 223 1710 64
2  Protein   TRANSCRIPTIONAL REGULATOR ARAR  B 225 1732 72
3  Protein   TRANSCRIPTIONAL REGULATOR ARAR  C 226 1742 72
4  Protein   TRANSCRIPTIONAL REGULATOR ARAR  D 228 1749 72
5  Ligand   TRANSCRIPTIONAL REGULATOR ARAR  A 1 0 4
6  Ligand   TRANSCRIPTIONAL REGULATOR ARAR  B 1 0 4
7  Ligand   TRANSCRIPTIONAL REGULATOR ARAR  C 1 0 4
8  Ligand   TRANSCRIPTIONAL REGULATOR ARAR  D 1 0 4
9 Water     259 0 259
total       1165 6933 555

Proteins
Unit 1 ASN3 TYR4 TYR5 SER6 SER7 ASN8 PRO9 THR10 PHE11 TYR12 LEU13 GLY14 ILE15 ASP16 CYS17 ILE18 ILE19 PHE20 GLY21 PHE22 ASN23 GLU24 GLY25 GLU26 ILE27 SER28 LEU29 LEU30 LEU31 LEU32 LYS33 ARG34 ASN35 PHE36 GLU37 PRO38 ALA39 MSE40 GLY41 GLU42 TRP43 SER44 LEU45 MSE46 GLY47 GLY48 PHE49 VAL50 GLN51 LYS52 ASP53 GLU54 SER55 VAL56 ASP57 ASP58 ALA59 ALA60 LYS61 ARG62 VAL63 LEU64 ALA65 GLU66 LEU67 THR68 GLY69 LEU70 GLU71 ASN72 VAL73 TYR74 MSE75 GLU76 GLN77 VAL78 GLY79 ALA80 PHE81 GLY82 ALA83 ILE84 ASP85 ARG86 ASP87 PRO88 GLY89 GLU90 ARG91 VAL92 VAL93 SER94 ILE95 ALA96 TYR97 TYR98 ALA99 LEU100 ILE101 ASN102 ILE103 ASN104 GLU105 TYR106 ASP107 ARG108 GLU109 LEU110 VAL111 GLN112 LYS113 HIS114 ASN115 ALA116 TYR117 TRP118 VAL119 ASN120 ILE121 ASN122 GLU123 LEU124 PRO125 ALA126 LEU127 ILE128 PHE129 ASP130 HIS131 PRO132 GLU133 MSE134 VAL135 ASP136 LYS137 ALA138 ARG139 GLU140 MSE141 MSE142 LYS143 GLN144 LYS145 ALA146 SER147 VAL148 GLU149 PRO150 ILE151 GLY152 PHE153 ASN154 LEU155 LEU156 PRO157 LYS158 LEU159 PHE160 THR161 LEU162 SER163 GLN164 LEU165 GLN166 SER167 LEU168 TYR169 GLU170 ALA171 ILE172 TYR173 GLY174 GLU175 PRO176 MSE177 ASP178 LYS179 ARG180 ASN181 PHE182 ARG183 LYS184 ARG185 VAL186 ALA187 GLU188 MSE189 ASP190 PHE191 ILE192 GLU193 LYS194 THR195 ASP196 LYS197 ILE198 ASP199 LYS200 LEU201 GLY202 SER203 LYS204 ARG205 GLY206 ALA207 ALA208 LEU209 TYR210 LYS211 PHE212 ASN213 GLY214 LYS215 ALA216 TYR217 ARG218 LYS219 ASP220 PRO221 LYS222 PHE223 LYS224 LEU225
Unit 2 ALA0 MSE1 LYS2 ASN3 TYR4 TYR5 SER6 SER7 ASN8 PRO9 THR10 PHE11 TYR12 LEU13 GLY14 ILE15 ASP16 CYS17 ILE18 ILE19 PHE20 GLY21 PHE22 ASN23 GLU24 GLY25 GLU26 ILE27 SER28 LEU29 LEU30 LEU31 LEU32 LYS33 ARG34 ASN35 PHE36 GLU37 PRO38 ALA39 MSE40 GLY41 GLU42 TRP43 SER44 LEU45 MSE46 GLY47 GLY48 PHE49 VAL50 GLN51 LYS52 ASP53 GLU54 SER55 VAL56 ASP57 ASP58 ALA59 ALA60 LYS61 ARG62 VAL63 LEU64 ALA65 GLU66 LEU67 THR68 GLY69 LEU70 GLU71 ASN72 VAL73 TYR74 MSE75 GLU76 GLN77 VAL78 GLY79 ALA80 PHE81 GLY82 ALA83 ILE84 ASP85 ARG86 ASP87 PRO88 GLY89 GLU90 ARG91 VAL92 VAL93 SER94 ILE95 ALA96 TYR97 TYR98 ALA99 LEU100 ILE101 ASN102 ILE103 ASN104 GLU105 TYR106 ASP107 ARG108 GLU109 LEU110 VAL111 GLN112 LYS113 HIS114 ASN115 ALA116 TYR117 TRP118 VAL119 ASN120 ILE121 ASN122 GLU123 LEU124 PRO125 ALA126 LEU127 ILE128 PHE129 ASP130 HIS131 PRO132 GLU133 MSE134 VAL135 ASP136 LYS137 ALA138 ARG139 GLU140 MSE141 MSE142 LYS143 GLN144 LYS145 ALA146 SER147 VAL148 GLU149 PRO150 ILE151 GLY152 PHE153 ASN154 LEU155 LEU156 PRO157 LYS158 LEU159 PHE160 THR161 LEU162 SER163 GLN164 LEU165 GLN166 SER167 LEU168 TYR169 GLU170 ALA171 ILE172 TYR173 GLY174 GLU175 PRO176 MSE177 ASP178 LYS179 ARG180 ASN181 PHE182 ARG183 LYS184 ARG185 VAL186 ALA187 GLU188 MSE189 ASP190 PHE191 ILE192 GLU193 LYS194 THR195 ASP196 LYS197 ILE198 ASP199 LYS200 LEU201 GLY202 SER203 LYS204 ARG205 GLY206 ALA207 ALA208 LEU209 TYR210 LYS211 PHE212 ASN213 GLY214 LYS215 ALA216 TYR217 ARG218 LYS219 ASP220 PRO221 PHE223 LYS224 LEU225
Unit 3 ALA0 MSE1 LYS2 ASN3 TYR4 TYR5 SER6 SER7 ASN8 PRO9 THR10 PHE11 TYR12 LEU13 GLY14 ILE15 ASP16 CYS17 ILE18 ILE19 PHE20 GLY21 PHE22 ASN23 GLU24 GLY25 GLU26 ILE27 SER28 LEU29 LEU30 LEU31 LEU32 LYS33 ARG34 ASN35 PHE36 GLU37 PRO38 ALA39 MSE40 GLY41 GLU42 TRP43 SER44 LEU45 MSE46 GLY47 GLY48 PHE49 VAL50 GLN51 LYS52 ASP53 GLU54 SER55 VAL56 ASP57 ASP58 ALA59 ALA60 LYS61 ARG62 VAL63 LEU64 ALA65 GLU66 LEU67 THR68 GLY69 LEU70 GLU71 ASN72 VAL73 TYR74 MSE75 GLU76 GLN77 VAL78 GLY79 ALA80 PHE81 GLY82 ALA83 ILE84 ASP85 ARG86 ASP87 PRO88 GLY89 GLU90 ARG91 VAL92 VAL93 SER94 ILE95 ALA96 TYR97 TYR98 ALA99 LEU100 ILE101 ASN102 ILE103 ASN104 GLU105 TYR106 ASP107 ARG108 GLU109 LEU110 VAL111 GLN112 LYS113 HIS114 ASN115 ALA116 TYR117 TRP118 VAL119 ASN120 ILE121 ASN122 GLU123 LEU124 PRO125 ALA126 LEU127 ILE128 PHE129 ASP130 HIS131 PRO132 GLU133 MSE134 VAL135 ASP136 LYS137 ALA138 ARG139 GLU140 MSE141 MSE142 LYS143 GLN144 LYS145 ALA146 SER147 VAL148 GLU149 PRO150 ILE151 GLY152 PHE153 ASN154 LEU155 LEU156 PRO157 LYS158 LEU159 PHE160 THR161 LEU162 SER163 GLN164 LEU165 GLN166 SER167 LEU168 TYR169 GLU170 ALA171 ILE172 TYR173 GLY174 GLU175 PRO176 MSE177 ASP178 LYS179 ARG180 ASN181 PHE182 ARG183 LYS184 ARG185 VAL186 ALA187 GLU188 MSE189 ASP190 PHE191 ILE192 GLU193 LYS194 THR195 ASP196 LYS197 ILE198 ASP199 LYS200 LEU201 GLY202 SER203 LYS204 ARG205 GLY206 ALA207 ALA208 LEU209 TYR210 LYS211 PHE212 ASN213 GLY214 LYS215 ALA216 TYR217 ARG218 LYS219 ASP220 PRO221 LYS222 PHE223 LYS224 LEU225
Unit 4 SER-2 ASN-1 ALA0 MSE1 LYS2 ASN3 TYR4 TYR5 SER6 SER7 ASN8 PRO9 THR10 PHE11 TYR12 LEU13 GLY14 ILE15 ASP16 CYS17 ILE18 ILE19 PHE20 GLY21 PHE22 ASN23 GLU24 GLY25 GLU26 ILE27 SER28 LEU29 LEU30 LEU31 LEU32 LYS33 ARG34 ASN35 PHE36 GLU37 PRO38 ALA39 MSE40 GLY41 GLU42 TRP43 SER44 LEU45 MSE46 GLY47 GLY48 PHE49 VAL50 GLN51 LYS52 ASP53 GLU54 SER55 VAL56 ASP57 ASP58 ALA59 ALA60 LYS61 ARG62 VAL63 LEU64 ALA65 GLU66 LEU67 THR68 GLY69 LEU70 GLU71 ASN72 VAL73 TYR74 MSE75 GLU76 GLN77 VAL78 GLY79 ALA80 PHE81 GLY82 ALA83 ILE84 ASP85 ARG86 ASP87 PRO88 GLY89 GLU90 ARG91 VAL92 VAL93 SER94 ILE95 ALA96 TYR97 TYR98 ALA99 LEU100 ILE101 ASN102 ILE103 ASN104 GLU105 TYR106 ASP107 ARG108 GLU109 LEU110 VAL111 GLN112 LYS113 HIS114 ASN115 ALA116 TYR117 TRP118 VAL119 ASN120 ILE121 ASN122 GLU123 LEU124 PRO125 ALA126 LEU127 ILE128 PHE129 ASP130 HIS131 PRO132 GLU133 MSE134 VAL135 ASP136 LYS137 ALA138 ARG139 GLU140 MSE141 MSE142 LYS143 GLN144 LYS145 ALA146 SER147 VAL148 GLU149 PRO150 ILE151 GLY152 PHE153 ASN154 LEU155 LEU156 PRO157 LYS158 LEU159 PHE160 THR161 LEU162 SER163 GLN164 LEU165 GLN166 SER167 LEU168 TYR169 GLU170 ALA171 ILE172 TYR173 GLY174 GLU175 PRO176 MSE177 ASP178 LYS179 ARG180 ASN181 PHE182 ARG183 LYS184 ARG185 VAL186 ALA187 GLU188 MSE189 ASP190 PHE191 ILE192 GLU193 LYS194 THR195 ASP196 LYS197 ILE198 ASP199 LYS200 LEU201 GLY202 SER203 LYS204 ARG205 GLY206 ALA207 ALA208 LEU209 TYR210 LYS211 PHE212 ASN213 GLY214 LYS215 ALA216 TYR217 ARG218 LYS219 ASP220 PRO221 LYS222 PHE223 LYS224 LEU225

Ligands
Unit 5 EDO301
Unit 6 EDO301
Unit 7 EDO301
Unit 8 EDO301

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany