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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF TRMBL2, AN ARCHAEAL CHROMATIN PROTEIN, SHOWS A OF DNA BINDING.
Keywords CHROMATIN BINDING PROTEIN, ARCHAEA, DNA BINDING PROTEIN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5BPI     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   TRMBL2  A 263 2149 0
2  Protein   TRMBL2  B 263 2149 0
3  Protein   TRMBL2  C 258 2110 0
4  Protein   TRMBL2  D 255 2087 0
5  Other macromolecule   DNA (5'- D(P*TP*AP*TP*AP*TP*CP*AP*TP*CP*GP*AP*TP*AP*GP*TP*GP*AP*TP*A 3')  E 21 432 0
6  Other macromolecule   DNA (5'- D(P*TP*AP*TP*AP*TP*CP*AP*CP*TP*AP*TP*CP*GP*AP*TP*GP*AP*TP*A 3')  F 21 429 0
7  Ligand   TRMBL2  A 1 0 14
total       1082 9356 14

Proteins
Unit 1 SER2 LYS3 ASP4 ARG5 MET6 VAL7 GLU8 LEU9 LEU10 GLN11 GLU12 HIS13 PHE14 GLU15 LEU16 ASN17 LEU18 TYR19 GLU20 ALA21 ARG22 ALA23 TYR24 VAL25 ALA26 LEU27 VAL28 ALA29 PHE30 GLY31 VAL32 LEU33 THR34 PRO35 ALA36 GLU37 LEU38 ALA39 SER40 VAL41 SER42 GLU43 VAL44 PRO45 ALA46 PRO47 ARG48 THR49 TYR50 ASP51 VAL52 LEU53 ARG54 SER55 LEU56 GLU57 LYS58 LYS59 GLY60 PHE61 ALA62 MET63 THR64 GLN65 PRO66 GLY67 LYS68 THR69 ASN70 LYS71 TYR72 ARG73 PRO74 VAL75 HIS76 PRO77 ALA78 ASN79 VAL80 LEU81 GLU82 LYS83 PHE84 ILE85 GLN86 ASP87 TRP88 GLN89 GLU90 ARG91 VAL92 LYS93 GLU94 GLU95 LEU96 GLU97 ALA98 LYS99 LYS100 LYS101 ALA102 LYS103 GLU104 GLU105 LEU106 LEU107 GLU108 LEU109 MET110 ALA111 PRO112 LEU113 ILE114 GLU115 THR116 GLU117 VAL118 PRO119 LYS120 TYR121 GLY122 VAL123 GLU124 ARG125 VAL126 TRP127 VAL128 VAL129 ARG130 GLY131 ILE132 LYS133 ASN134 SER135 THR136 LEU137 LYS138 THR139 LYS140 GLU141 MET142 LEU143 GLU144 GLU145 ALA146 GLN147 ASN148 GLU149 ILE150 LEU151 LEU152 ALA153 ASP154 ASP155 GLY156 PHE157 ILE158 ALA159 VAL160 ASN161 LEU162 GLU163 ASP164 ASP165 ILE166 ILE167 LYS168 ALA169 VAL170 ASP171 ARG172 GLY173 VAL174 LYS175 THR176 LYS177 ILE178 LEU179 LEU180 THR181 LYS182 ASN183 LEU184 LEU185 PRO186 ARG187 LEU188 LYS189 ALA190 SER191 LYS192 ILE193 ILE194 ASP195 TYR196 ALA197 LYS198 GLU199 GLY200 LYS201 LEU202 GLU203 LEU204 ARG205 ALA206 LEU207 ASP208 LYS209 PHE210 ASP211 LEU212 PRO213 MET214 LEU215 ILE216 CYS217 ASP218 GLU219 GLU220 VAL221 PHE222 PHE223 ALA224 LEU225 GLU226 ASP227 LEU228 ALA229 ALA230 ARG231 TYR232 PHE233 ASN234 TYR235 GLU236 THR237 GLN238 VAL239 TRP240 ILE241 LYS242 ASP243 HIS244 ARG245 VAL246 VAL247 ALA248 LEU249 PHE250 LYS251 GLU252 LYS253 PHE254 ASN255 GLU256 TYR257 TRP258 GLU259 LYS260 ALA261 GLU262 LYS263 VAL264
Unit 2 SER2 LYS3 ASP4 ARG5 MET6 VAL7 GLU8 LEU9 LEU10 GLN11 GLU12 HIS13 PHE14 GLU15 LEU16 ASN17 LEU18 TYR19 GLU20 ALA21 ARG22 ALA23 TYR24 VAL25 ALA26 LEU27 VAL28 ALA29 PHE30 GLY31 VAL32 LEU33 THR34 PRO35 ALA36 GLU37 LEU38 ALA39 SER40 VAL41 SER42 GLU43 VAL44 PRO45 ALA46 PRO47 ARG48 THR49 TYR50 ASP51 VAL52 LEU53 ARG54 SER55 LEU56 GLU57 LYS58 LYS59 GLY60 PHE61 ALA62 MET63 THR64 GLN65 PRO66 GLY67 LYS68 THR69 ASN70 LYS71 TYR72 ARG73 PRO74 VAL75 HIS76 PRO77 ALA78 ASN79 VAL80 LEU81 GLU82 LYS83 PHE84 ILE85 GLN86 ASP87 TRP88 GLN89 GLU90 ARG91 VAL92 LYS93 GLU94 GLU95 LEU96 GLU97 ALA98 LYS99 LYS100 LYS101 ALA102 LYS103 GLU104 GLU105 LEU106 LEU107 GLU108 LEU109 MET110 ALA111 PRO112 LEU113 ILE114 GLU115 THR116 GLU117 VAL118 PRO119 LYS120 TYR121 GLY122 VAL123 GLU124 ARG125 VAL126 TRP127 VAL128 VAL129 ARG130 GLY131 ILE132 LYS133 ASN134 SER135 THR136 LEU137 LYS138 THR139 LYS140 GLU141 MET142 LEU143 GLU144 GLU145 ALA146 GLN147 ASN148 GLU149 ILE150 LEU151 LEU152 ALA153 ASP154 ASP155 GLY156 PHE157 ILE158 ALA159 VAL160 ASN161 LEU162 GLU163 ASP164 ASP165 ILE166 ILE167 LYS168 ALA169 VAL170 ASP171 ARG172 GLY173 VAL174 LYS175 THR176 LYS177 ILE178 LEU179 LEU180 THR181 LYS182 ASN183 LEU184 LEU185 PRO186 ARG187 LEU188 LYS189 ALA190 SER191 LYS192 ILE193 ILE194 ASP195 TYR196 ALA197 LYS198 GLU199 GLY200 LYS201 LEU202 GLU203 LEU204 ARG205 ALA206 LEU207 ASP208 LYS209 PHE210 ASP211 LEU212 PRO213 MET214 LEU215 ILE216 CYS217 ASP218 GLU219 GLU220 VAL221 PHE222 PHE223 ALA224 LEU225 GLU226 ASP227 LEU228 ALA229 ALA230 ARG231 TYR232 PHE233 ASN234 TYR235 GLU236 THR237 GLN238 VAL239 TRP240 ILE241 LYS242 ASP243 HIS244 ARG245 VAL246 VAL247 ALA248 LEU249 PHE250 LYS251 GLU252 LYS253 PHE254 ASN255 GLU256 TYR257 TRP258 GLU259 LYS260 ALA261 GLU262 LYS263 VAL264
Unit 3 SER2 LYS3 ASP4 ARG5 MET6 VAL7 GLU8 LEU9 LEU10 GLN11 GLU12 HIS13 PHE14 GLU15 LEU16 ASN17 LEU18 TYR19 GLU20 ALA21 ARG22 ALA23 TYR24 VAL25 ALA26 LEU27 VAL28 ALA29 PHE30 GLY31 VAL32 LEU33 THR34 PRO35 ALA36 GLU37 LEU38 ALA39 SER40 VAL41 SER42 GLU43 VAL44 PRO45 ALA46 PRO47 ARG48 THR49 TYR50 ASP51 VAL52 LEU53 ARG54 SER55 LEU56 GLU57 LYS58 LYS59 GLY60 PHE61 ALA62 MET63 THR64 GLN65 PRO66 GLY67 LYS68 THR69 ASN70 LYS71 TYR72 ARG73 PRO74 VAL75 HIS76 PRO77 ALA78 ASN79 VAL80 LEU81 GLU82 LYS83 PHE84 ILE85 GLN86 ASP87 TRP88 GLN89 GLU90 ARG91 VAL92 LYS93 GLU94 GLU95 LEU96 GLU97 ALA98 LYS99 LYS100 LYS101 ALA102 LYS103 GLU104 GLU105 LEU106 LEU107 GLU108 LEU109 MET110 ALA111 PRO112 LEU113 ILE114 GLU115 THR116 GLU117 VAL123 GLU124 ARG125 VAL126 TRP127 VAL128 VAL129 ARG130 GLY131 ILE132 LYS133 ASN134 SER135 THR136 LEU137 LYS138 THR139 LYS140 GLU141 MET142 LEU143 GLU144 GLU145 ALA146 GLN147 ASN148 GLU149 ILE150 LEU151 LEU152 ALA153 ASP154 ASP155 GLY156 PHE157 ILE158 ALA159 VAL160 ASN161 LEU162 GLU163 ASP164 ASP165 ILE166 ILE167 LYS168 ALA169 VAL170 ASP171 ARG172 GLY173 VAL174 LYS175 THR176 LYS177 ILE178 LEU179 LEU180 THR181 LYS182 ASN183 LEU184 LEU185 PRO186 ARG187 LEU188 LYS189 ALA190 SER191 LYS192 ILE193 ILE194 ASP195 TYR196 ALA197 LYS198 GLU199 GLY200 LYS201 LEU202 GLU203 LEU204 ARG205 ALA206 LEU207 ASP208 LYS209 PHE210 ASP211 LEU212 PRO213 MET214 LEU215 ILE216 CYS217 ASP218 GLU219 GLU220 VAL221 PHE222 PHE223 ALA224 LEU225 GLU226 ASP227 LEU228 ALA229 ALA230 ARG231 TYR232 PHE233 ASN234 TYR235 GLU236 THR237 GLN238 VAL239 TRP240 ILE241 LYS242 ASP243 HIS244 ARG245 VAL246 VAL247 ALA248 LEU249 PHE250 LYS251 GLU252 LYS253 PHE254 ASN255 GLU256 TYR257 TRP258 GLU259 LYS260 ALA261 GLU262 LYS263 VAL264
Unit 4 SER2 LYS3 ASP4 ARG5 MET6 VAL7 GLU8 LEU9 LEU10 GLN11 GLU12 HIS13 PHE14 GLU15 LEU16 ASN17 LEU18 TYR19 GLU20 ALA21 ARG22 ALA23 TYR24 VAL25 ALA26 LEU27 VAL28 ALA29 PHE30 GLY31 VAL32 LEU33 THR34 PRO35 ALA36 GLU37 LEU38 ALA39 SER40 VAL41 SER42 GLU43 VAL44 PRO45 ALA46 PRO47 ARG48 THR49 TYR50 ASP51 VAL52 LEU53 ARG54 SER55 LEU56 GLU57 LYS58 LYS59 GLY60 PHE61 ALA62 MET63 THR64 GLN65 PRO66 GLY67 LYS68 THR69 ASN70 LYS71 TYR72 ARG73 PRO74 VAL75 HIS76 PRO77 ALA78 ASN79 VAL80 LEU81 GLU82 LYS83 PHE84 ILE85 GLN86 ASP87 TRP88 GLN89 GLU90 ARG91 VAL92 LYS93 GLU94 GLU95 LEU96 GLU97 ALA98 LYS99 LYS100 LYS101 ALA102 LYS103 GLU104 GLU105 LEU106 LEU107 GLU108 LEU109 MET110 ALA111 PRO112 LEU113 ILE114 GLU115 GLU124 ARG125 VAL126 TRP127 VAL128 VAL129 ARG130 GLY131 ILE132 LYS133 ASN134 SER135 THR136 LEU137 LYS138 THR139 LYS140 GLU141 MET142 LEU143 GLU144 GLU145 ALA146 GLN147 ASN148 GLU149 ILE150 LEU151 LEU152 ALA153 ASP154 ASP155 GLY156 PHE157 ILE158 ALA159 VAL160 ASN161 LEU162 GLU163 ASP164 ASP165 ILE166 ILE167 LYS168 ALA169 VAL170 ASP171 ARG172 GLY173 VAL174 LYS175 THR176 LYS177 ILE178 LEU179 LEU180 THR181 LYS182 ASN183 LEU184 LEU185 PRO186 ARG187 LEU188 LYS189 ALA190 SER191 LYS192 ILE193 ILE194 ASP195 TYR196 ALA197 LYS198 GLU199 GLY200 LYS201 LEU202 GLU203 LEU204 ARG205 ALA206 LEU207 ASP208 LYS209 PHE210 ASP211 LEU212 PRO213 MET214 LEU215 ILE216 CYS217 ASP218 GLU219 GLU220 VAL221 PHE222 PHE223 ALA224 LEU225 GLU226 ASP227 LEU228 ALA229 ALA230 ARG231 TYR232 PHE233 ASN234 TYR235 GLU236 THR237 GLN238 VAL239 TRP240 ILE241 LYS242 ASP243 HIS244 ARG245 VAL246 VAL247 ALA248 LEU249 PHE250 LYS251 GLU252 LYS253 PHE254 ASN255 GLU256 TYR257 TRP258 GLU259 LYS260 ALA261 GLU262 LYS263 VAL264

Other macromolecules
Unit 5 DT1 DA2 DT3 DA4 DT5 DC6 DA7 DT8 DC9 DG10 DA11 DT12 DA13 DG14 DT15 DG16 DA17 DT18 DA19 DT20 DA21
Unit 6 DT1 DA2 DT3 DA4 DT5 DC6 DA7 DC8 DT9 DA10 DT11 DC12 DG13 DA14 DT15 DG16 DA17 DT18 DA19 DT20 DA21

Ligands
Unit 7 GOL301

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany