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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THG1 LIKE PROTEIN (TLP) WITH TRNA(PHE)
Keywords TRANSFERASE, TRANSFERASE-RNA COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5AXN     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein    A 219 1801 0
2  Protein    B 239 1956 0
3  RNA    P 66 1385 32
4  Ligand    A 4 0 35
5  Ligand    B 3 0 34
6 Water     16 0 16
total       547 5142 117

Proteins
Unit 1 MET1 LYS2 THR3 ARG4 GLU5 ILE6 TYR7 ALA8 GLU9 MET10 ARG11 CYS12 ILE13 PRO14 PRO15 VAL16 VAL17 LEU18 ARG19 ALA20 ASP21 GLY22 ARG23 ASN24 PHE25 LYS26 ASN27 THR28 LEU29 SER30 GLY31 LEU32 GLY33 PHE34 GLU35 LYS36 PRO37 TYR38 ASP39 LYS40 THR41 PHE42 ALA43 ARG44 ALA45 MET46 ALA47 ASP48 THR49 ALA50 GLU51 LEU52 PHE53 ILE54 LYS55 LYS56 SER57 GLY58 LEU59 SER60 PRO61 LEU62 PHE63 ALA64 TYR65 THR66 PHE67 SER68 ASP69 GLU70 ILE71 SER72 PHE73 LEU74 PHE75 THR76 ASP77 LEU78 PRO79 PHE80 ASP81 GLY82 ARG83 VAL84 GLU85 LYS86 ILE87 ASP88 SER89 VAL90 VAL91 ALA92 SER93 PHE94 LEU95 GLY96 SER97 ALA98 LEU99 THR100 ILE101 LYS102 LEU103 ARG104 LEU105 GLU106 GLU107 PRO108 ILE109 ALA110 PHE111 ASP112 SER113 ARG114 LEU115 VAL116 ALA117 LEU118 GLN119 LYS120 GLU121 GLU122 ILE123 PRO124 GLU125 TYR126 PHE127 HIS128 ARG129 ARG130 GLN131 LEU132 GLU133 ALA134 TRP135 ARG136 ASN137 PHE138 VAL139 ALA140 SER141 TRP142 GLY143 TYR144 TYR145 ALA146 LEU147 ARG148 ASN149 MET152 GLY153 ARG154 ASN155 GLU156 ALA157 ALA158 LYS159 TYR160 LEU161 LYS162 ARG163 LYS164 LYS165 GLU166 SER167 GLU168 ILE169 HIS170 GLU171 MET172 LEU173 PHE174 GLU175 ARG176 GLY177 ILE178 ASN179 LEU180 ALA181 THR182 LEU183 PRO184 SER185 TRP186 GLN187 ARG188 ARG189 GLY190 VAL191 ILE192 ILE193 SER194 LYS195 ARG216 LYS217 ILE218 THR219 GLN220 ASN221 TRP222 GLU223 ILE224 PRO225 LYS226 PHE227 LYS228 SER229 GLU230 LYS231 GLY232 ILE233 PRO234 PHE235 LEU236 GLU237 LYS238 LEU239 ILE240 ASN241
Unit 2 THR3 ARG4 GLU5 ILE6 TYR7 ALA8 GLU9 MET10 ARG11 CYS12 ILE13 PRO14 PRO15 VAL16 VAL17 LEU18 ARG19 ALA20 ASP21 GLY22 ARG23 ASN24 PHE25 LYS26 ASN27 THR28 LEU29 SER30 GLY31 LEU32 GLY33 PHE34 GLU35 LYS36 PRO37 TYR38 ASP39 LYS40 THR41 PHE42 ALA43 ARG44 ALA45 MET46 ALA47 ASP48 THR49 ALA50 GLU51 LEU52 PHE53 ILE54 LYS55 LYS56 SER57 GLY58 LEU59 SER60 PRO61 LEU62 PHE63 ALA64 TYR65 THR66 PHE67 SER68 ASP69 GLU70 ILE71 SER72 PHE73 LEU74 PHE75 THR76 ASP77 LEU78 PRO79 PHE80 ASP81 GLY82 ARG83 VAL84 GLU85 LYS86 ILE87 ASP88 SER89 VAL90 VAL91 ALA92 SER93 PHE94 LEU95 GLY96 SER97 ALA98 LEU99 THR100 ILE101 LYS102 LEU103 ARG104 LEU105 GLU106 GLU107 PRO108 ILE109 ALA110 PHE111 ASP112 SER113 ARG114 LEU115 VAL116 ALA117 LEU118 GLN119 LYS120 GLU121 GLU122 ILE123 PRO124 GLU125 TYR126 PHE127 HIS128 ARG129 ARG130 GLN131 LEU132 GLU133 ALA134 TRP135 ARG136 ASN137 PHE138 VAL139 ALA140 SER141 TRP142 GLY143 TYR144 TYR145 ALA146 LEU147 ARG148 ASN149 GLU150 GLY151 MET152 GLY153 ARG154 ASN155 GLU156 ALA157 ALA158 LYS159 TYR160 LEU161 LYS162 ARG163 LYS164 LYS165 GLU166 SER167 GLU168 ILE169 HIS170 GLU171 MET172 LEU173 PHE174 GLU175 ARG176 GLY177 ILE178 ASN179 LEU180 ALA181 THR182 LEU183 PRO184 SER185 TRP186 GLN187 ARG188 ARG189 GLY190 VAL191 ILE192 ILE193 SER194 LYS195 GLU196 ALA197 ARG198 GLU199 ILE200 GLN201 GLY202 PHE203 ASN204 PRO205 VAL206 SER207 GLY208 LYS209 GLU210 GLU211 LYS212 SER213 LEU214 ARG215 ARG216 LYS217 ILE218 THR219 GLN220 ASN221 TRP222 GLU223 ILE224 PRO225 LYS226 PHE227 LYS228 SER229 GLU230 LYS231 GLY232 ILE233 PRO234 PHE235 LEU236 GLU237 LYS238 LEU239 ILE240 ASN241

Nucleic acids
Unit 3 GTP2 G3 G4 A5 U6 U7 U8 A9 G10 C11 U12 C13 A14 G15 U16 U17 G18 G19 G20 A21 G22 A23 G24 C25 G26 C27 C28 A29 G30 A38 U39 C40 U41 G42 G43 A44 G45 G46 U47 C48 C49 U50 G51 U52 G53 U54 U55 C56 G57 A58 U59 C60 C61 A62 C63 A64 G65 A66 A67 U68 C69 C70 C71 C72 A73 C74

Ligands
Unit 4 MG301 MG302 MG303 GNP304
Unit 5 GNP301 MG302 MG303

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany