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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF THERMOPHILIC DEXTRANASE FROM THERMOANAE PSEUDETHANOLICUS, D312G MUTANT IN COMPLEX WITH ISOMALTOHEXA
Keywords GLYCOSIDE HYDROLASE FAMILY 66, HYDROLASE
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5AXH     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   DEXTRANASE  A 586 4779 0
2  Protein   DEXTRANASE  B 587 4787 0
3  Ligand    C 4 0 45
4  Ligand    D 6 0 67
5  Ligand   DEXTRANASE  A 4 0 22
6  Ligand   DEXTRANASE  B 2 0 10
7 Water     594 0 594
total       1783 9566 738
Proteins
Unit 1 ILE26 PHE27 SER28 PHE29 LYS30 ASP31 ASP32 ASN33 ASN34 ILE35 VAL36 ALA37 LEU38 THR39 LYS40 GLY41 LYS42 LEU43 ILE44 SER45 ASP46 VAL47 TYR48 THR49 ASP50 LYS51 ALA52 ARG53 TYR54 TYR55 PRO56 SER57 ASP58 LYS59 VAL60 THR61 VAL62 LYS63 ILE64 GLU65 LEU66 ASN67 ASN68 GLU69 LEU70 GLN71 GLU72 ASP73 PHE74 ARG75 GLY76 THR77 ILE78 TYR79 ILE80 PHE81 TYR82 LYS83 HIS84 LEU85 GLU86 SER87 ILE88 VAL89 GLY90 LYS91 ALA92 LYS93 ILE94 GLN95 VAL96 ASN97 ILE98 LYS99 SER100 GLY101 GLN102 LYS103 LYS104 GLN105 LEU106 ASN107 ILE108 PHE109 TRP110 GLU111 ALA112 PRO113 LYS114 ASP115 ASP116 PHE117 LYS118 GLY119 TYR120 LEU121 VAL122 GLU123 VAL124 TYR125 ALA126 VAL127 LYS128 GLY129 ASN130 LYS131 ALA132 ILE133 ASP134 ASN135 LYS136 ASN137 THR138 ALA139 VAL140 ASP141 VAL142 SER143 SER144 ASP145 TRP146 SER147 LYS148 PHE149 PRO150 ARG151 TYR152 GLY153 TYR154 ILE155 ALA156 ASN157 PHE158 PRO159 GLU160 GLN161 SER162 LYS163 GLU164 LYS165 SER166 ALA167 LEU168 ILE169 ILE170 GLU171 ASP172 LEU173 ASN174 LYS175 TYR176 HIS177 LEU178 ASN179 GLY180 LEU181 LEU182 PHE183 TYR184 ASP185 TRP186 GLN187 TYR188 LYS189 HIS190 ASN191 LYS192 PRO193 LEU194 ALA195 GLY196 THR197 VAL198 GLU199 ASN200 PRO201 ASP202 PRO203 LYS204 TRP205 LYS206 ASP207 ILE208 ALA209 ASN210 ARG211 ASP212 ILE213 TYR214 GLY215 GLN216 THR217 VAL218 LYS219 ASP220 TYR221 ILE222 GLU223 LEU224 ALA225 HIS226 SER227 LYS228 ASN229 ILE230 MET231 VAL232 ALA233 ASN234 TYR235 ASN236 LEU237 MET238 TYR239 GLY240 GLY241 TYR242 PHE243 ASP244 TYR245 VAL246 LYS247 ASP248 GLY249 ALA250 LYS251 PRO252 GLU253 TRP254 GLY255 LEU256 TYR257 LYS258 ASP259 PRO260 ASN261 HIS262 GLU263 GLU264 GLN265 ASP266 ASN267 HIS268 PRO269 LEU270 PRO271 HIS272 THR273 TRP274 ALA275 THR276 ASP277 ARG278 LEU279 TYR280 LEU281 PHE282 ASN283 PRO284 ALA285 ASN286 LYS287 ASP288 TRP289 GLN290 ASN291 TYR292 ILE293 PHE294 ASN295 ALA296 GLU297 LYS298 ASP299 ALA300 PHE301 ARG302 VAL303 TYR304 ASN305 PHE306 ASP307 VAL308 TRP309 HIS310 VAL311 GLY312 THR313 LEU314 GLY315 PRO316 ARG317 GLY318 MET319 VAL320 TYR321 ASP322 TYR323 ASN324 GLY325 ASN326 PRO327 VAL328 GLU329 LEU330 SER331 PHE332 THR333 TYR334 ALA335 ASP336 PHE337 LEU338 ASN339 ASN340 ALA341 LYS342 ASN343 ALA344 LEU345 GLY346 LYS347 ARG348 ILE349 VAL350 CYS351 ASN352 THR353 VAL354 ASN355 GLU356 TYR357 GLY358 LEU359 ILE360 ASN361 VAL362 ALA363 SER364 GLY365 ALA366 ASP367 VAL368 ASP369 PHE370 LEU371 TYR372 VAL373 GLU374 ILE375 TRP376 PRO377 PRO378 ALA379 ARG380 ALA381 HIS382 TYR383 ASN384 PHE385 LEU386 LYS387 GLN388 THR389 VAL390 ASP391 ASN392 GLY393 TYR394 ASN395 TYR396 SER397 ASP398 GLY399 LYS400 LYS401 ALA402 THR403 VAL404 VAL405 ALA406 ALA407 TYR408 MET409 ASN410 TYR411 GLY412 ILE413 ALA414 ASP415 ARG416 SER417 ALA418 GLU419 PHE420 ASN421 LYS422 HIS423 SER424 VAL425 ARG426 LEU427 THR428 ASP429 ALA430 ALA431 ILE432 PHE433 ALA434 ALA435 GLY436 GLY437 ASP438 HIS439 ILE440 GLU441 LEU442 GLY443 ASP444 THR445 GLY446 MET447 LEU448 SER449 LYS450 GLU451 TYR452 PHE453 PRO454 SER455 ALA456 ASN457 LEU458 LYS459 MET460 SER461 GLU462 SER463 LEU464 VAL465 LYS466 ALA467 MET468 ARG469 ASN470 TYR471 TYR472 ASP473 PHE474 LEU475 THR476 ALA477 TYR478 GLU479 ASN480 LEU481 LEU482 ARG483 ASP484 GLY485 LEU486 LYS487 GLU488 SER489 ASP490 ASN491 LYS492 ILE493 GLU494 ILE495 PRO496 GLY497 ILE498 GLU499 ILE500 SER501 ASN502 ASN503 GLY504 SER505 ALA506 ARG507 THR508 VAL509 TRP510 THR511 TYR512 ALA513 LYS514 GLN515 LYS516 ASP517 GLY518 TYR519 ASP520 VAL521 ILE522 HIS523 MET524 ILE525 ASN526 LEU527 LEU528 GLY529 ILE530 GLU531 VAL532 SER533 ASN534 TRP535 ARG536 ASP537 ASP538 LEU539 GLY540 ASN541 TYR542 SER543 ALA544 PRO545 PRO546 ILE547 ILE548 LYS549 ASP550 PHE551 LYS552 VAL553 LYS554 TYR555 TYR556 LEU557 GLU558 ASN559 ASP560 ASN561 ILE562 LYS563 ASN564 VAL565 TYR566 LEU567 ALA568 SER569 PRO570 ASP571 ILE572 ASN573 ASP574 GLY575 LYS576 VAL577 MET578 LYS579 LEU580 GLN581 PHE582 LYS583 LYS584 LYS585 GLU586 ASP587 SER588 LYS589 GLY590 LYS591 TYR592 LEU593 GLU594 ILE595 SER596 VAL597 PRO598 GLU599 LEU600 GLN601 TYR602 TRP603 ASP604 MET605 ILE606 PHE607 ILE608 LYS609 LYS610 LEU611
Unit 2 ASN25 ILE26 PHE27 SER28 PHE29 LYS30 ASP31 ASP32 ASN33 ASN34 ILE35 VAL36 ALA37 LEU38 THR39 LYS40 GLY41 LYS42 LEU43 ILE44 SER45 ASP46 VAL47 TYR48 THR49 ASP50 LYS51 ALA52 ARG53 TYR54 TYR55 PRO56 SER57 ASP58 LYS59 VAL60 THR61 VAL62 LYS63 ILE64 GLU65 LEU66 ASN67 ASN68 GLU69 LEU70 GLN71 GLU72 ASP73 PHE74 ARG75 GLY76 THR77 ILE78 TYR79 ILE80 PHE81 TYR82 LYS83 HIS84 LEU85 GLU86 SER87 ILE88 VAL89 GLY90 LYS91 ALA92 LYS93 ILE94 GLN95 VAL96 ASN97 ILE98 LYS99 SER100 GLY101 GLN102 LYS103 LYS104 GLN105 LEU106 ASN107 ILE108 PHE109 TRP110 GLU111 ALA112 PRO113 LYS114 ASP115 ASP116 PHE117 LYS118 GLY119 TYR120 LEU121 VAL122 GLU123 VAL124 TYR125 ALA126 VAL127 LYS128 GLY129 ASN130 LYS131 ALA132 ILE133 ASP134 ASN135 LYS136 ASN137 THR138 ALA139 VAL140 ASP141 VAL142 SER143 SER144 ASP145 TRP146 SER147 LYS148 PHE149 PRO150 ARG151 TYR152 GLY153 TYR154 ILE155 ALA156 ASN157 PHE158 PRO159 GLU160 GLN161 SER162 LYS163 GLU164 LYS165 SER166 ALA167 LEU168 ILE169 ILE170 GLU171 ASP172 LEU173 ASN174 LYS175 TYR176 HIS177 LEU178 ASN179 GLY180 LEU181 LEU182 PHE183 TYR184 ASP185 TRP186 GLN187 TYR188 LYS189 HIS190 ASN191 LYS192 PRO193 LEU194 ALA195 GLY196 THR197 VAL198 GLU199 ASN200 PRO201 ASP202 PRO203 LYS204 TRP205 LYS206 ASP207 ILE208 ALA209 ASN210 ARG211 ASP212 ILE213 TYR214 GLY215 GLN216 THR217 VAL218 LYS219 ASP220 TYR221 ILE222 GLU223 LEU224 ALA225 HIS226 SER227 LYS228 ASN229 ILE230 MET231 VAL232 ALA233 ASN234 TYR235 ASN236 LEU237 MET238 TYR239 GLY240 GLY241 TYR242 PHE243 ASP244 TYR245 VAL246 LYS247 ASP248 GLY249 ALA250 LYS251 PRO252 GLU253 TRP254 GLY255 LEU256 TYR257 LYS258 ASP259 PRO260 ASN261 HIS262 GLU263 GLU264 GLN265 ASP266 ASN267 HIS268 PRO269 LEU270 PRO271 HIS272 THR273 TRP274 ALA275 THR276 ASP277 ARG278 LEU279 TYR280 LEU281 PHE282 ASN283 PRO284 ALA285 ASN286 LYS287 ASP288 TRP289 GLN290 ASN291 TYR292 ILE293 PHE294 ASN295 ALA296 GLU297 LYS298 ASP299 ALA300 PHE301 ARG302 VAL303 TYR304 ASN305 PHE306 ASP307 VAL308 TRP309 HIS310 VAL311 GLY312 THR313 LEU314 GLY315 PRO316 ARG317 GLY318 MET319 VAL320 TYR321 ASP322 TYR323 ASN324 GLY325 ASN326 PRO327 VAL328 GLU329 LEU330 SER331 PHE332 THR333 TYR334 ALA335 ASP336 PHE337 LEU338 ASN339 ASN340 ALA341 LYS342 ASN343 ALA344 LEU345 GLY346 LYS347 ARG348 ILE349 VAL350 CYS351 ASN352 THR353 VAL354 ASN355 GLU356 TYR357 GLY358 LEU359 ILE360 ASN361 VAL362 ALA363 SER364 GLY365 ALA366 ASP367 VAL368 ASP369 PHE370 LEU371 TYR372 VAL373 GLU374 ILE375 TRP376 PRO377 PRO378 ALA379 ARG380 ALA381 HIS382 TYR383 ASN384 PHE385 LEU386 LYS387 GLN388 THR389 VAL390 ASP391 ASN392 GLY393 TYR394 ASN395 TYR396 SER397 ASP398 GLY399 LYS400 LYS401 ALA402 THR403 VAL404 VAL405 ALA406 ALA407 TYR408 MET409 ASN410 TYR411 GLY412 ILE413 ALA414 ASP415 ARG416 SER417 ALA418 GLU419 PHE420 ASN421 LYS422 HIS423 SER424 VAL425 ARG426 LEU427 THR428 ASP429 ALA430 ALA431 ILE432 PHE433 ALA434 ALA435 GLY436 GLY437 ASP438 HIS439 ILE440 GLU441 LEU442 GLY443 ASP444 THR445 GLY446 MET447 LEU448 SER449 LYS450 GLU451 TYR452 PHE453 PRO454 SER455 ALA456 ASN457 LEU458 LYS459 MET460 SER461 GLU462 SER463 LEU464 VAL465 LYS466 ALA467 MET468 ARG469 ASN470 TYR471 TYR472 ASP473 PHE474 LEU475 THR476 ALA477 TYR478 GLU479 ASN480 LEU481 LEU482 ARG483 ASP484 GLY485 LEU486 LYS487 GLU488 SER489 ASP490 ASN491 LYS492 ILE493 GLU494 ILE495 PRO496 GLY497 ILE498 GLU499 ILE500 SER501 ASN502 ASN503 GLY504 SER505 ALA506 ARG507 THR508 VAL509 TRP510 THR511 TYR512 ALA513 LYS514 GLN515 LYS516 ASP517 GLY518 TYR519 ASP520 VAL521 ILE522 HIS523 MET524 ILE525 ASN526 LEU527 LEU528 GLY529 ILE530 GLU531 VAL532 SER533 ASN534 TRP535 ARG536 ASP537 ASP538 LEU539 GLY540 ASN541 TYR542 SER543 ALA544 PRO545 PRO546 ILE547 ILE548 LYS549 ASP550 PHE551 LYS552 VAL553 LYS554 TYR555 TYR556 LEU557 GLU558 ASN559 ASP560 ASN561 ILE562 LYS563 ASN564 VAL565 TYR566 LEU567 ALA568 SER569 PRO570 ASP571 ILE572 ASN573 ASP574 GLY575 LYS576 VAL577 MET578 LYS579 LEU580 GLN581 PHE582 LYS583 LYS584 LYS585 GLU586 ASP587 SER588 LYS589 GLY590 LYS591 TYR592 LEU593 GLU594 ILE595 SER596 VAL597 PRO598 GLU599 LEU600 GLN601 TYR602 TRP603 ASP604 MET605 ILE606 PHE607 ILE608 LYS609 LYS610 LEU611
Ligands
Unit 3 GLC1 GLC2 GLC3 GLC4
Unit 4 BGC1 GLC2 GLC3 GLC4 GLC5 GLC6
Unit 5 PO4705 PO4706 GOL707 GOL708
Unit 6 PO4707 PO4708
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany