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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF IGE FC IN COMPLEX WITH A NEUTRALIZING A
Keywords IMMUNE SYSTEM, THERAPEUTIC ANTIBODY, IGG, IGE, ASTHMA
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   5ANM     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   IMMUNOGLOBULIN G  A 213 1582 0
2  Protein   IMMUNOGLOBULIN G  B 220 1673 0
3  Protein   IMMUNOGLOBULIN G  C 213 1582 0
4  Protein   IMMUNOGLOBULIN G  D 219 1664 0
5  Protein   IG EPSILON CHAIN C REGION  E 206 1636 0
6  Protein   IG EPSILON CHAIN C REGION  F 208 1628 0
7  Protein   IG EPSILON CHAIN C REGION  G 211 1665 0
8  Protein   IMMUNOGLOBULIN G  H 208 1580 0
9  Protein   IMMUNOGLOBULIN G  L 189 1383 0
10  Ligand    I 6 0 72
11  Ligand    J 5 0 61
12  Ligand    K 6 0 72
13 Water     190 0 190
total       2094 14393 395
Proteins
Unit 1 SER2 VAL3 LEU4 THR5 GLN6 PRO7 PRO8 SER9 VAL10 SER11 GLY12 ALA13 PRO14 GLY15 GLN16 ARG17 VAL18 THR19 ILE20 SER21 CYS22 THR23 GLY24 SER25 SER26 SER27 ASN28 ILE29 GLY30 ALA31 GLY32 TYR33 ASP34 VAL35 HIS36 TRP37 TYR38 GLN39 GLN40 LEU41 PRO42 GLY43 THR44 ALA45 PRO46 LYS47 LEU48 LEU49 ILE50 TYR51 ASP52 ASN53 PHE54 ASN55 ARG56 PRO57 SER58 GLY59 VAL60 PRO61 ASP62 ARG63 PHE64 SER65 GLY66 SER67 LYS68 SER69 GLY70 THR71 SER72 ALA73 SER74 LEU75 ALA76 ILE77 THR78 GLY79 LEU80 GLN81 ALA82 GLU83 ASP84 GLU85 ALA86 ASP87 TYR88 TYR89 CYS90 GLN91 SER92 TYR93 ASP94 SER95 PRO96 THR97 LEU98 THR99 SER100 PRO101 PHE102 GLY103 THR104 GLY105 THR106 LYS107 LEU108 THR109 VAL110 LEU111 GLY112 GLN113 PRO114 LYS115 ALA116 ALA117 PRO118 SER119 VAL120 THR121 LEU122 PHE123 PRO124 PRO125 SER126 SER127 GLU128 GLU129 LEU130 GLN131 ALA132 ASN133 LYS134 ALA135 THR136 LEU137 VAL138 CYS139 LEU140 ILE141 SER142 ASP143 PHE144 TYR145 PRO146 GLY147 ALA148 VAL149 THR150 VAL151 ALA152 TRP153 LYS154 ALA155 ASP156 SER157 SER158 PRO159 VAL160 LYS161 ALA162 GLY163 VAL164 GLU165 THR166 THR167 THR168 PRO169 SER170 LYS171 GLN172 SER173 ASN174 ASN175 LYS176 TYR177 ALA178 ALA179 SER180 SER181 TYR182 LEU183 SER184 LEU185 THR186 PRO187 GLU188 GLN189 TRP190 LYS191 SER192 HIS193 ARG194 SER195 TYR196 SER197 CYS198 GLN199 VAL200 THR201 HIS202 GLU203 GLY204 SER205 THR206 VAL207 GLU208 LYS209 THR210 VAL211 ALA212 PRO213 THR214
Unit 2 GLU1 VAL2 GLN3 LEU4 VAL5 GLN6 SER7 GLY8 ALA9 GLU10 VAL11 LYS12 LYS13 PRO14 GLY15 ALA16 THR17 VAL18 LYS19 ILE20 SER21 CYS22 LYS23 VAL24 TYR25 GLY26 TYR27 ILE28 PHE29 THR30 ASP31 TYR32 ASN33 ILE34 TYR35 TRP36 VAL37 ARG38 GLN39 ALA40 PRO41 GLY42 LYS43 GLY44 LEU45 GLU46 TRP47 MET48 GLY49 LEU50 ILE51 ASP52 PRO53 ASP54 ASN55 GLY56 GLU57 THR58 PHE59 TYR60 ALA61 GLU62 LYS63 PHE64 GLN65 GLY66 ARG67 ALA68 THR69 MET70 THR71 ALA72 ASP73 THR74 SER75 SER76 ASP77 ARG78 ALA79 TYR80 MET81 GLU82 LEU83 SER84 SER85 LEU86 ARG87 PHE88 GLU89 ASP90 THR91 ALA92 VAL93 TYR94 TYR95 CYS96 ALA97 THR98 VAL99 MET100 GLY101 LYS102 TRP103 ILE104 LYS105 GLY106 GLY107 TYR108 ASP109 TYR110 TRP111 GLY112 ARG113 GLY114 THR115 LEU116 VAL117 THR118 VAL119 SER120 SER121 ALA122 SER123 THR124 LYS125 GLY126 PRO127 SER128 VAL129 PHE130 PRO131 LEU132 ALA133 PRO134 SER135 SER136 LYS137 SER140 GLY141 GLY142 THR143 ALA144 ALA145 LEU146 GLY147 CYS148 LEU149 VAL150 LYS151 ASP152 TYR153 PHE154 PRO155 GLU156 PRO157 VAL158 THR159 VAL160 SER161 TRP162 ASN163 SER164 GLY165 ALA166 LEU167 THR168 SER169 GLY170 VAL171 HIS172 THR173 PHE174 PRO175 ALA176 VAL177 LEU178 GLN179 SER180 SER181 GLY182 LEU183 TYR184 SER185 LEU186 SER187 SER188 VAL189 VAL190 THR191 VAL192 PRO193 SER194 SER195 SER196 LEU197 GLY198 THR199 GLN200 THR201 TYR202 ILE203 CYS204 ASN205 VAL206 ASN207 HIS208 LYS209 PRO210 SER211 ASN212 THR213 LYS214 VAL215 ASP216 LYS217 LYS218 VAL219 GLU220 PRO221 LYS222
Unit 3 SER2 VAL3 LEU4 THR5 GLN6 PRO7 PRO8 SER9 VAL10 SER11 GLY12 ALA13 PRO14 GLY15 GLN16 ARG17 VAL18 THR19 ILE20 SER21 CYS22 THR23 GLY24 SER25 SER26 SER27 ASN28 ILE29 GLY30 ALA31 GLY32 TYR33 ASP34 VAL35 HIS36 TRP37 TYR38 GLN39 GLN40 LEU41 PRO42 GLY43 THR44 ALA45 PRO46 LYS47 LEU48 LEU49 ILE50 TYR51 ASP52 ASN53 PHE54 ASN55 ARG56 PRO57 SER58 GLY59 VAL60 PRO61 ASP62 ARG63 PHE64 SER65 GLY66 SER67 LYS68 SER69 GLY70 THR71 SER72 ALA73 SER74 LEU75 ALA76 ILE77 THR78 GLY79 LEU80 GLN81 ALA82 GLU83 ASP84 GLU85 ALA86 ASP87 TYR88 TYR89 CYS90 GLN91 SER92 TYR93 ASP94 SER95 PRO96 THR97 LEU98 THR99 SER100 PRO101 PHE102 GLY103 THR104 GLY105 THR106 LYS107 LEU108 THR109 VAL110 LEU111 GLY112 GLN113 PRO114 LYS115 ALA116 ALA117 PRO118 SER119 VAL120 THR121 LEU122 PHE123 PRO124 PRO125 SER126 SER127 GLU128 GLU129 LEU130 GLN131 ALA132 ASN133 LYS134 ALA135 THR136 LEU137 VAL138 CYS139 LEU140 ILE141 SER142 ASP143 PHE144 TYR145 PRO146 GLY147 ALA148 VAL149 THR150 VAL151 ALA152 TRP153 LYS154 ALA155 ASP156 SER157 SER158 PRO159 VAL160 LYS161 ALA162 GLY163 VAL164 GLU165 THR166 THR167 THR168 PRO169 SER170 LYS171 GLN172 SER173 ASN174 ASN175 LYS176 TYR177 ALA178 ALA179 SER180 SER181 TYR182 LEU183 SER184 LEU185 THR186 PRO187 GLU188 GLN189 TRP190 LYS191 SER192 HIS193 ARG194 SER195 TYR196 SER197 CYS198 GLN199 VAL200 THR201 HIS202 GLU203 GLY204 SER205 THR206 VAL207 GLU208 LYS209 THR210 VAL211 ALA212 PRO213 THR214
Unit 4 GLU1 VAL2 GLN3 LEU4 VAL5 GLN6 SER7 GLY8 ALA9 GLU10 VAL11 LYS12 LYS13 PRO14 GLY15 ALA16 THR17 VAL18 LYS19 ILE20 SER21 CYS22 LYS23 VAL24 TYR25 GLY26 TYR27 ILE28 PHE29 THR30 ASP31 TYR32 ASN33 ILE34 TYR35 TRP36 VAL37 ARG38 GLN39 ALA40 PRO41 GLY42 LYS43 GLY44 LEU45 GLU46 TRP47 MET48 GLY49 LEU50 ILE51 ASP52 PRO53 ASP54 ASN55 GLY56 GLU57 THR58 PHE59 TYR60 ALA61 GLU62 LYS63 PHE64 GLN65 GLY66 ARG67 ALA68 THR69 MET70 THR71 ALA72 ASP73 THR74 SER75 SER76 ASP77 ARG78 ALA79 TYR80 MET81 GLU82 LEU83 SER84 SER85 LEU86 ARG87 PHE88 GLU89 ASP90 THR91 ALA92 VAL93 TYR94 TYR95 CYS96 ALA97 THR98 VAL99 MET100 GLY101 LYS102 TRP103 ILE104 LYS105 GLY106 GLY107 TYR108 ASP109 TYR110 TRP111 GLY112 ARG113 GLY114 THR115 LEU116 VAL117 THR118 VAL119 SER120 SER121 ALA122 SER123 THR124 LYS125 GLY126 PRO127 SER128 VAL129 PHE130 PRO131 LEU132 ALA133 PRO134 SER135 SER136 GLY141 GLY142 THR143 ALA144 ALA145 LEU146 GLY147 CYS148 LEU149 VAL150 LYS151 ASP152 TYR153 PHE154 PRO155 GLU156 PRO157 VAL158 THR159 VAL160 SER161 TRP162 ASN163 SER164 GLY165 ALA166 LEU167 THR168 SER169 GLY170 VAL171 HIS172 THR173 PHE174 PRO175 ALA176 VAL177 LEU178 GLN179 SER180 SER181 GLY182 LEU183 TYR184 SER185 LEU186 SER187 SER188 VAL189 VAL190 THR191 VAL192 PRO193 SER194 SER195 SER196 LEU197 GLY198 THR199 GLN200 THR201 TYR202 ILE203 CYS204 ASN205 VAL206 ASN207 HIS208 LYS209 PRO210 SER211 ASN212 THR213 LYS214 VAL215 ASP216 LYS217 LYS218 VAL219 GLU220 PRO221 LYS222 SER223
Unit 5 VAL336 SER337 ALA338 TYR339 LEU340 SER341 ARG342 PRO343 SER344 PRO345 PHE346 ASP347 LEU348 PHE349 ILE350 ARG351 LYS352 SER353 PRO354 THR355 ILE356 THR357 CYS358 LEU359 VAL360 VAL361 ASP362 LEU363 ALA364 PRO365 SER366 LYS367 GLY368 THR369 VAL370 ASN371 LEU372 THR373 TRP374 SER375 ARG376 ALA377 SER378 GLY379 LYS380 PRO381 VAL382 ASN383 HIS384 SER385 THR386 ARG387 LYS388 GLU389 GLU390 LYS391 GLN392 ARG393 ASN394 GLY395 THR396 LEU397 THR398 VAL399 THR400 SER401 THR402 LEU403 PRO404 VAL405 GLY406 THR407 ARG408 ASP409 TRP410 ILE411 GLU412 GLY413 GLU414 THR415 TYR416 GLN417 CYS418 ARG419 VAL420 THR421 HIS422 PRO423 HIS424 LEU425 PRO426 ARG427 ALA428 LEU429 MET430 ARG431 SER432 THR433 THR434 LYS435 THR436 SER437 GLY438 PRO439 ARG440 ALA441 ALA442 PRO443 GLU444 VAL445 TYR446 ALA447 PHE448 ALA449 THR450 PRO451 GLU452 TRP453 PRO454 GLY455 SER456 ARG457 ASP458 LYS459 ARG460 THR461 LEU462 ALA463 CYS464 LEU465 ILE466 GLN467 ASN468 PHE469 MET470 PRO471 GLU472 ASP473 ILE474 SER475 VAL476 GLN477 TRP478 LEU479 HIS480 ASN481 GLU482 VAL483 GLN484 LEU485 PRO486 ASP487 ALA488 ARG489 HIS490 SER491 THR492 THR493 GLN494 PRO495 ARG496 LYS497 THR498 LYS499 GLY500 PHE503 PHE504 VAL505 PHE506 SER507 ARG508 LEU509 GLU510 VAL511 THR512 ARG513 ALA514 GLU515 TRP516 GLU517 GLN518 LYS519 ASP520 GLU521 PHE522 ILE523 CYS524 ARG525 ALA526 VAL527 HIS528 GLU529 ALA530 ALA531 SER532 PRO533 SER534 GLN535 THR536 VAL537 GLN538 ARG539 ALA540 VAL541 SER542 VAL543
Unit 6 GLY335 VAL336 SER337 ALA338 TYR339 LEU340 SER341 ARG342 PRO343 SER344 PRO345 PHE346 ASP347 LEU348 PHE349 ILE350 ARG351 LYS352 SER353 PRO354 THR355 ILE356 THR357 CYS358 LEU359 VAL360 VAL361 ASP362 LEU363 ALA364 PRO365 SER366 LYS367 GLY368 THR369 VAL370 ASN371 LEU372 THR373 TRP374 SER375 ARG376 ALA377 SER378 GLY379 LYS380 PRO381 VAL382 ASN383 HIS384 SER385 THR386 ARG387 LYS388 GLU389 GLU390 LYS391 GLN392 ARG393 ASN394 GLY395 THR396 LEU397 THR398 VAL399 THR400 SER401 THR402 LEU403 PRO404 VAL405 GLY406 THR407 ARG408 ASP409 TRP410 ILE411 GLU412 GLY413 GLU414 THR415 TYR416 GLN417 CYS418 ARG419 VAL420 THR421 HIS422 PRO423 PRO426 ARG427 ALA428 LEU429 MET430 ARG431 SER432 THR433 THR434 LYS435 THR436 SER437 GLY438 PRO439 ARG440 ALA441 ALA442 PRO443 GLU444 VAL445 TYR446 ALA447 PHE448 ALA449 THR450 PRO451 PRO454 GLY455 SER456 ARG457 ASP458 LYS459 ARG460 THR461 LEU462 ALA463 CYS464 LEU465 ILE466 GLN467 ASN468 PHE469 MET470 PRO471 GLU472 ASP473 ILE474 SER475 VAL476 GLN477 TRP478 LEU479 HIS480 ASN481 GLU482 VAL483 GLN484 LEU485 PRO486 ASP487 ALA488 ARG489 HIS490 SER491 THR492 THR493 GLN494 PRO495 ARG496 LYS497 THR498 LYS499 GLY500 SER501 GLY502 PHE503 PHE504 VAL505 PHE506 SER507 ARG508 LEU509 GLU510 VAL511 THR512 ARG513 ALA514 GLU515 TRP516 GLU517 GLN518 LYS519 ASP520 GLU521 PHE522 ILE523 CYS524 ARG525 ALA526 VAL527 HIS528 GLU529 ALA530 ALA531 SER532 PRO533 SER534 GLN535 THR536 VAL537 GLN538 ARG539 ALA540 VAL541 SER542 VAL543 ASN544 PRO545 GLY546
Unit 7 GLY335 VAL336 SER337 ALA338 TYR339 LEU340 SER341 ARG342 PRO343 SER344 PRO345 PHE346 ASP347 LEU348 PHE349 ILE350 ARG351 LYS352 SER353 PRO354 THR355 ILE356 THR357 CYS358 LEU359 VAL360 VAL361 ASP362 LEU363 ALA364 PRO365 SER366 LYS367 GLY368 THR369 VAL370 ASN371 LEU372 THR373 TRP374 SER375 ARG376 ALA377 SER378 GLY379 LYS380 PRO381 VAL382 ASN383 HIS384 SER385 THR386 ARG387 LYS388 GLU389 GLU390 LYS391 GLN392 ARG393 ASN394 GLY395 THR396 LEU397 THR398 VAL399 THR400 SER401 THR402 LEU403 PRO404 VAL405 GLY406 THR407 ARG408 ASP409 TRP410 ILE411 GLU412 GLY413 GLU414 THR415 TYR416 GLN417 CYS418 ARG419 VAL420 THR421 HIS422 PRO423 HIS424 LEU425 PRO426 ARG427 ALA428 LEU429 MET430 ARG431 SER432 THR433 THR434 LYS435 THR436 SER437 GLY438 PRO439 ARG440 ALA441 ALA442 PRO443 GLU444 VAL445 TYR446 ALA447 PHE448 ALA449 THR450 PRO451 GLU452 TRP453 PRO454 GLY455 SER456 ARG457 ASP458 LYS459 ARG460 THR461 LEU462 ALA463 CYS464 LEU465 ILE466 GLN467 ASN468 PHE469 MET470 PRO471 GLU472 ASP473 ILE474 SER475 VAL476 GLN477 TRP478 LEU479 HIS480 ASN481 GLU482 VAL483 GLN484 LEU485 PRO486 ASP487 ALA488 ARG489 HIS490 SER491 THR492 THR493 GLN494 PRO495 ARG496 LYS497 THR498 LYS499 GLY500 SER501 GLY502 PHE503 PHE504 VAL505 PHE506 SER507 ARG508 LEU509 GLU510 VAL511 THR512 ARG513 ALA514 GLU515 TRP516 GLU517 GLN518 LYS519 ASP520 GLU521 PHE522 ILE523 CYS524 ARG525 ALA526 VAL527 HIS528 GLU529 ALA530 ALA531 SER532 PRO533 SER534 GLN535 THR536 VAL537 GLN538 ARG539 ALA540 VAL541 SER542 VAL543 ASN544 PRO545
Unit 8 GLU1 VAL2 GLN3 LEU4 VAL5 GLN6 SER7 GLY8 ALA9 GLU10 VAL11 LYS12 LYS13 PRO14 GLY15 ALA16 THR17 VAL18 LYS19 ILE20 SER21 CYS22 LYS23 VAL24 TYR25 GLY26 TYR27 ILE28 PHE29 THR30 ASP31 TYR32 ASN33 ILE34 TYR35 TRP36 VAL37 ARG38 GLN39 ALA40 PRO41 GLY42 LYS43 GLY44 LEU45 GLU46 TRP47 MET48 GLY49 LEU50 ILE51 ASP52 PRO53 ASP54 ASN55 GLY56 GLU57 THR58 PHE59 TYR60 ALA61 GLU62 LYS63 PHE64 GLN65 GLY66 ARG67 ALA68 THR69 MET70 THR71 ALA72 ASP73 THR74 SER75 SER76 ASP77 ARG78 ALA79 TYR80 MET81 GLU82 LEU83 SER84 SER85 LEU86 ARG87 PHE88 GLU89 ASP90 THR91 ALA92 VAL93 TYR94 TYR95 CYS96 ALA97 THR98 VAL99 MET100 GLY101 GLY106 GLY107 TYR108 ASP109 TYR110 TRP111 GLY112 ARG113 GLY114 THR115 LEU116 VAL117 THR118 VAL119 SER120 SER121 ALA122 SER123 THR124 LYS125 GLY126 PRO127 SER128 VAL129 PHE130 PRO131 LEU132 ALA133 PRO134 SER135 GLY142 THR143 ALA144 ALA145 LEU146 GLY147 CYS148 LEU149 VAL150 LYS151 ASP152 TYR153 PHE154 PRO155 GLU156 PRO157 VAL158 THR159 VAL160 SER161 TRP162 ASN163 SER164 GLY165 ALA166 LEU167 THR168 SER169 GLY170 VAL171 HIS172 THR173 PHE174 PRO175 ALA176 VAL177 LEU178 GLN179 SER180 SER181 GLY182 LEU183 TYR184 SER185 LEU186 SER187 SER188 VAL189 VAL190 THR191 VAL192 PRO193 SER194 LEU197 GLY198 THR199 GLN200 THR201 TYR202 ILE203 CYS204 ASN205 VAL206 ASN207 HIS208 LYS209 PRO210 SER211 ASN212 THR213 LYS214 VAL215 ASP216 LYS217 LYS218 VAL219 GLU220
Unit 9 VAL3 LEU4 THR5 GLN6 PRO7 PRO8 SER9 VAL10 SER11 GLY12 ALA13 PRO14 GLY15 GLN16 ARG17 VAL18 THR19 ILE20 SER21 CYS22 THR23 GLY24 SER25 SER26 SER27 ASN28 ILE29 GLY30 ALA31 GLY32 TYR33 ASP34 VAL35 HIS36 TRP37 TYR38 GLN39 GLN40 LEU41 PRO42 GLY43 THR44 ALA45 PRO46 LYS47 LEU48 LEU49 ILE50 TYR51 ASP52 ASN53 PHE54 ASN55 ARG56 PRO57 SER58 GLY59 VAL60 PRO61 ASP62 ARG63 PHE64 SER65 GLY66 SER67 LYS68 SER69 GLY70 THR71 SER72 ALA73 SER74 LEU75 ALA76 ILE77 THR78 GLY79 LEU80 GLN81 ALA82 GLU83 ASP84 GLU85 ALA86 ASP87 TYR88 TYR89 CYS90 GLN91 SER92 TYR93 ASP94 SER95 PRO96 THR97 LEU98 THR99 SER100 PRO101 PHE102 GLY103 THR104 GLY105 THR106 LYS107 LEU108 THR109 VAL110 PRO114 LYS115 ALA116 ALA117 PRO118 SER119 VAL120 THR121 LEU122 PHE123 PRO124 PRO125 SER126 ALA135 THR136 LEU137 VAL138 CYS139 LEU140 ILE141 SER142 ASP143 ALA148 VAL149 THR150 VAL151 ALA152 TRP153 LYS154 ALA155 ASP156 SER157 SER158 PRO159 VAL160 LYS161 ALA162 GLY163 VAL164 GLU165 THR166 THR167 THR168 PRO169 SER170 LYS171 GLN172 ALA178 ALA179 SER180 SER181 TYR182 LEU183 SER184 LEU185 THR186 PRO187 GLU188 SER192 HIS193 ARG194 SER195 TYR196 SER197 CYS198 GLN199 VAL200 THR201 HIS202 GLU203 GLY204 SER205 THR206 VAL207 GLU208 LYS209 THR210 VAL211 ALA212 PRO213 THR214
Ligands
Unit 10 NAG1 NAG2 BMA3 MAN4 MAN5 MAN6
Unit 11 NAG1 NAG2 BMA3 BMA4 MAN5
Unit 12 NAG1 NAG2 BMA3 MAN4 MAN5 BMA6
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany