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Sequence, Chains, Asymmetric and Biological Units

Title MECHANISM OF EIF6 RELEASE FROM THE NASCENT 60S RIBOSOMAL SUB
Keywords TRANSLATION, RIBOSOMOPATHY, EFL1, GTPASE, RIBOSOME BIOGENESI
Experiment ELECTRON MICROSCOPY
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5AN9     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   60S RIBOSOMAL PROTEIN L3  A 398 3176 0
2  Protein   60S RIBOSOMAL PROTEIN L9  B 188 1491 0
3  Protein   60S ACIDIC RIBOSOMAL PROTEIN P0  C 205 1571 0
4  Protein   60S RIBOSOMAL PROTEIN L12  D 166 1245 0
5  Protein   60S RIBOSOMAL PROTEIN L23  E 136 1017 0
6  Protein   60S RIBOSOMAL PROTEIN L10  F 217 1721 0
7  Protein   60S RIBOSOMAL PROTEIN L24  G 69 586 0
8  Protein   UBIQUITIN-60S RIBOSOMAL PROTEIN L40  H 52 427 0
9  Protein   EUKARYOTIC TRANSLATION INITIATION FACTOR 6  I 224 1686 0
10  Protein   RIBOSOME MATURATION PROTEIN SBDS  J 250 2015 0
11  RNA    N 1162 24758 0
total       3067 39693 0

Proteins
Unit 1 MET1 SER2 HIS3 ARG4 LYS5 PHE6 GLU7 ALA8 PRO9 ARG10 HIS11 GLY12 ASN13 LEU14 GLY15 PHE16 ARG17 PRO18 ARG19 LYS20 ARG21 ALA22 ALA23 ARG24 HIS25 GLN26 GLY27 LYS28 VAL29 LYS30 SER31 PHE32 PRO33 LYS34 ASP35 ASP36 ARG37 THR38 GLN39 LYS40 VAL41 HIS42 LEU43 THR44 ALA45 PHE46 MET47 GLY48 TYR49 LYS50 ALA51 GLY52 MET53 THR54 HIS55 VAL56 VAL57 ARG58 ASP59 LEU60 GLU61 LYS62 PRO63 GLY64 SER65 LYS66 MET67 HIS68 LYS69 LYS70 GLU71 ILE72 VAL73 GLU74 ALA75 VAL76 THR77 ILE78 ILE79 GLU80 CYS81 PRO82 PRO83 MET84 TYR85 ILE86 VAL87 GLY88 LEU89 VAL90 GLY91 TYR92 VAL93 GLU94 THR95 ALA96 GLN97 GLY98 LEU99 LYS100 THR101 TYR102 LYS103 THR104 VAL105 TRP106 ALA107 GLN108 HIS109 LEU110 SER111 ASP112 ASN113 PHE114 ARG115 ARG116 ARG117 LEU118 TYR119 LYS120 ASN121 TRP122 TYR123 LYS124 SER125 LYS126 SER127 LYS128 LYS129 ALA130 PHE131 THR132 LYS133 TYR134 VAL135 LYS136 GLN137 TYR138 GLU139 THR140 GLU141 GLU142 GLY143 LYS144 LYS145 SER146 ILE147 GLU148 ALA149 SER150 LEU151 GLN152 ALA153 ILE154 LYS155 LYS156 ARG157 CYS158 SER159 VAL160 VAL161 ARG162 VAL163 ILE164 ALA165 HIS166 THR167 GLN168 VAL169 HIS170 LYS171 LEU172 LYS173 LEU174 THR175 GLN176 LYS177 LYS178 ALA179 HIS180 VAL181 LEU182 GLU183 ILE184 GLN185 VAL186 ASN187 GLY188 GLY189 SER190 ILE191 VAL192 GLU193 LYS194 VAL195 ASN196 PHE197 ALA198 VAL199 ALA200 ASN201 PHE202 GLU203 LYS204 THR205 VAL206 ASN207 VAL208 THR209 GLY210 VAL211 PHE212 ALA213 GLU214 ASN215 GLU216 LEU217 ILE218 ASP219 VAL220 ILE221 GLY222 VAL223 THR224 LYS225 GLY226 LYS227 GLY228 PHE229 ASN230 GLY231 VAL232 ILE233 LYS234 ARG235 TRP236 GLY237 VAL238 ARG239 LYS240 LEU241 PRO242 ARG243 LYS244 THR245 HIS246 LYS247 GLY248 LEU249 ARG250 LYS251 VAL252 ALA253 CYS254 ILE255 GLY256 ALA257 TRP258 HIS259 PRO260 SER261 ARG262 VAL263 SER264 THR265 THR266 VAL267 PRO268 ARG269 ALA270 GLY271 GLN272 LEU273 GLY274 TYR275 HIS276 HIS277 ARG278 VAL279 GLU280 ARG281 ASN282 LYS283 LYS284 ILE285 TYR286 ARG287 ILE288 GLY289 GLN290 ALA291 GLN292 PRO293 GLU294 ASP295 GLY296 LYS297 GLN298 ILE299 SER300 THR301 GLY302 LYS303 THR304 GLU305 PHE306 ASP307 LEU308 THR309 GLU310 LYS311 THR312 ILE313 ASN314 PRO315 MET316 GLY317 GLY318 PHE319 ALA320 HIS321 TYR322 GLY323 MET324 VAL325 LYS326 HIS327 GLU328 PHE329 LEU330 MET331 LEU332 LYS333 GLY334 CYS335 VAL336 ALA337 GLY338 PRO339 ARG340 LYS341 ARG342 ALA343 LEU344 THR345 LEU346 ARG347 LYS348 SER349 ILE350 THR351 THR352 GLN353 THR354 GLY355 ARG356 ALA357 ALA358 LEU359 GLU360 LYS361 ILE362 THR363 LEU364 LYS365 PHE366 ILE367 ASP368 THR369 SER370 SER371 LYS372 PHE373 GLY374 HIS375 GLY376 LEU377 HIS378 GLN379 THR380 ALA381 GLU382 ASP383 LYS384 THR385 LYS386 TYR387 PHE388 GLY389 VAL390 LYS391 LYS392 SER393 ARG394 SER395 THR396 LYS397 ALA398
Unit 2 MET1 LYS2 VAL3 ILE4 ASN5 SER6 SER7 ARG8 LYS9 VAL10 GLN11 ILE12 PRO13 GLU14 ASN15 VAL16 THR17 VAL18 ASP19 VAL20 LYS21 GLY22 ARG23 SER24 VAL25 LYS26 VAL27 THR28 GLY29 PRO30 ARG31 GLY32 THR33 LEU34 SER35 LYS36 SER37 PHE38 ASP39 HIS40 ALA41 SER42 VAL43 ASP44 ILE45 ASN46 LEU47 VAL48 GLY49 LYS50 LYS51 GLU52 LEU53 THR54 VAL55 ASP56 LEU57 TRP58 PHE59 GLY60 ASN61 ARG62 LYS63 GLN64 ILE65 ALA66 CYS67 ILE68 LYS69 THR70 ILE71 THR72 SER73 ILE74 ILE75 GLU76 ASN77 MET78 ILE79 THR80 GLY81 VAL82 THR83 LYS84 GLY85 TYR86 GLU87 TYR88 LYS89 MET90 ARG91 PHE92 VAL93 TYR94 ALA95 HIS96 PHE97 PRO98 ILE99 ASN100 VAL101 ALA102 VAL103 THR104 ASP105 GLY106 GLY107 ARG108 VAL109 VAL110 GLU111 ILE112 ARG113 ASN114 PHE115 PHE116 GLY117 GLU118 LYS119 ILE120 VAL121 ARG122 ARG123 ILE124 GLU125 LEU126 LEU127 ASP128 GLY129 ILE130 THR131 CYS132 TYR133 ARG134 ASN135 GLU136 LYS137 ALA138 LYS139 ASP140 GLU141 ILE142 VAL143 LEU144 THR145 GLY146 ASN147 SER148 LEU149 GLU150 LEU151 LEU152 SER153 GLN154 SER155 CYS156 ALA157 THR158 ILE159 GLN160 LEU161 ARG162 SER163 ALA164 ILE165 LYS166 TYR167 LYS168 ASP169 VAL170 ARG171 LYS172 PHE173 LEU174 ASP175 GLY176 ILE177 TYR178 VAL179 SER180 GLU181 ARG182 ASN183 VAL184 LEU185 GLU186 SER187 ASN188
Unit 3 MET1 SER2 GLY3 ALA4 GLY5 SER6 LYS7 ARG8 LYS9 ASN10 VAL11 PHE12 ILE13 GLU14 LYS15 ALA16 THR17 LYS18 LEU19 PHE20 THR21 THR22 TYR23 ASP24 LYS25 MET26 ILE27 VAL28 ALA29 GLU30 ALA31 ASP32 PHE33 VAL34 GLY35 SER36 SER37 GLN38 LEU39 GLN40 LYS41 ILE42 ARG43 LYS44 SER45 ILE46 ARG47 GLY48 ILE49 GLY50 ALA51 VAL52 LEU53 MET54 GLY55 LYS56 LYS57 THR58 MET59 ILE60 ARG61 LYS62 VAL63 ILE64 ARG65 ASP66 LEU67 ALA68 ASP69 SER70 LYS71 PRO72 GLU73 LEU74 ASP75 ALA76 LEU77 ASN78 THR79 TYR80 LEU81 LYS82 GLN83 ASN84 THR85 CYS86 ILE87 ILE88 PHE89 CYS90 LYS91 ASP92 ASN93 ILE94 ALA95 GLU96 VAL97 LYS98 ARG99 VAL100 ILE101 ASN102 THR103 GLN104 ARG105 VAL106 GLY107 ALA108 PRO109 ALA110 LYS111 ALA112 GLY113 VAL114 PHE115 ALA116 PRO117 ASN118 ASP119 VAL120 ILE121 ILE122 PRO123 ALA124 GLY125 PRO126 THR127 GLY128 MET129 GLU130 PRO131 THR132 GLN133 THR134 SER135 PHE136 LEU137 GLN138 ASP139 LEU140 LYS141 ILE142 ALA143 THR144 LYS145 ILE146 ASN147 ARG148 GLY149 GLN150 ILE151 ASP152 ILE153 VAL154 ASN155 GLU156 VAL157 HIS158 ILE159 ILE160 LYS161 THR162 GLY163 GLN164 LYS165 VAL166 GLY167 ALA168 SER169 GLU170 ALA171 THR172 LEU173 LEU174 GLN175 LYS176 LEU177 ASN178 ILE179 LYS180 PRO181 PHE182 THR183 TYR184 GLY185 LEU186 GLU187 PRO188 LYS189 ILE190 ILE191 TYR192 ASP193 ALA194 GLY195 ALA196 CYS197 TYR198 SER199 PRO200 SER201 ILE202 SER203 GLU204 GLU205
Unit 4 MET1 PRO2 PRO3 LYS4 VAL5 ASP6 PRO7 SER8 GLU9 LYS10 VAL11 GLU12 VAL13 PHE14 LEU15 ARG16 VAL17 CYS18 GLY19 GLY20 GLU21 ALA22 GLY23 ALA24 MET25 SER26 THR27 LEU28 ALA29 PRO30 LYS31 LEU32 GLY33 PRO34 LEU35 GLY36 VAL37 SER38 PRO39 LYS40 LYS41 VAL42 GLY43 ASP44 ASP45 ILE46 ALA47 LYS48 ALA49 THR50 GLN51 PRO52 TRP53 LYS54 GLY55 MET56 LYS57 VAL58 SER59 VAL60 LYS61 LEU62 THR63 ILE64 GLN65 ASN66 ARG67 ILE68 ALA69 VAL70 PRO71 GLU72 VAL73 LEU74 PRO75 SER76 ALA77 SER78 ALA79 LEU80 VAL81 ILE82 LYS83 ALA84 LEU85 LYS86 GLU87 PRO88 PRO89 ARG90 ASP91 ARG92 LYS93 LYS94 GLU95 LYS96 ASN97 ILE98 LYS99 HIS100 ASN101 GLY102 ASN103 ILE104 PRO105 LEU106 GLU107 GLU108 ILE109 CYS110 LYS111 ILE112 ALA113 LYS114 THR115 MET116 ARG117 PHE118 LYS119 SER120 LEU121 ALA122 VAL123 ASP124 PHE125 LYS126 GLY127 SER128 VAL129 LEU130 GLU131 ILE132 LEU133 GLY134 THR135 ALA136 HIS137 SER138 VAL139 GLY140 CYS141 LYS142 VAL143 ASN144 GLY145 LYS146 SER147 PRO148 ARG149 ASP150 ILE151 GLN152 ALA153 GLY154 ILE155 GLN156 SER157 GLY158 GLU159 ILE160 GLU161 VAL162 VAL163 GLU164 PRO165 LYS166
Unit 5 MET1 SER2 LYS3 ALA4 GLN5 ALA6 VAL7 GLY8 SER9 ASN10 TYR11 ARG12 VAL13 SER14 LEU15 GLY16 LEU17 PRO18 VAL19 GLY20 ALA21 VAL22 MET23 ASN24 SER25 ALA26 ASP27 ASN28 SER29 GLY30 ALA31 LYS32 ASN33 LEU34 TYR35 VAL36 ILE37 ALA38 VAL39 LYS40 GLY41 ILE42 LYS43 GLY44 ARG45 LEU46 ASN47 ARG48 LEU49 PRO50 SER51 ALA52 GLY53 VAL54 GLY55 ASP56 MET57 VAL58 MET59 ALA60 THR61 VAL62 LYS63 LYS64 GLY65 LYS66 PRO67 GLU68 LEU69 ARG70 LYS71 LYS72 VAL73 CYS74 THR75 GLY76 LEU77 VAL78 VAL79 ARG80 GLN81 ARG82 LYS83 HIS84 TRP85 LYS86 ARG87 LYS88 ASP89 GLY90 VAL91 TYR92 ILE93 TYR94 PHE95 GLU96 ASP97 ASN98 ALA99 GLY100 VAL101 MET102 CYS103 ASN104 PRO105 LYS106 GLY107 GLU108 VAL109 LYS110 GLY111 ASN112 ILE113 LEU114 GLY115 PRO116 VAL117 ALA118 LYS119 GLU120 CYS121 SER122 ASP123 LEU124 TRP125 PRO126 LYS127 VAL128 ALA129 THR130 ASN131 ALA132 GLY133 THR134 ILE135 VAL136
Unit 6 MET1 GLY2 ARG3 ARG4 PRO5 ALA6 ARG7 CYS8 TYR9 ARG10 TYR11 CYS12 LYS13 ASN14 LYS15 PRO16 TYR17 ILE18 LYS19 SER20 ARG21 TYR22 CYS23 ARG24 GLY25 VAL26 PRO27 ASP28 ALA29 LYS30 ILE31 ARG32 ILE33 PHE34 ASP35 LEU36 GLY37 ARG38 LYS39 LYS40 ALA41 SER42 THR43 ASP44 GLU45 PHE46 PRO47 LEU48 CYS49 VAL50 HIS51 LEU52 ILE53 SER54 LEU55 GLU56 LYS57 GLU58 GLN59 LEU60 SER61 SER62 GLU63 ALA64 ILE65 GLU66 ALA67 GLY68 ARG69 ILE70 SER71 CYS72 ASN73 LYS74 TYR75 ILE76 SER77 LYS78 THR79 GLY80 GLY81 LYS82 ASP83 SER84 PHE85 HIS86 MET87 ARG88 VAL89 ARG90 VAL91 HIS92 PRO93 TRP94 HIS95 VAL96 LEU97 ARG98 ILE99 ASN100 LYS101 MET102 LEU103 SER104 CYS105 ALA106 GLY107 ALA108 ASP109 ARG110 LEU111 GLN112 THR113 GLY114 MET115 ARG116 GLY117 ALA118 PHE119 GLY120 LYS121 PRO122 MET123 GLY124 THR125 VAL126 ALA127 ARG128 VAL129 ASN130 ILE131 GLY132 GLN133 ILE134 ILE135 PHE136 SER137 ILE138 ARG139 THR140 ARG141 ASP142 ASN143 MET144 LEU145 ALA146 ASN147 VAL148 VAL149 GLU150 ALA151 LEU152 ARG153 ARG154 SER155 SER156 TYR157 LYS158 PHE159 PRO160 GLY161 ARG162 GLN163 LYS164 ILE165 VAL166 VAL167 SER168 LYS169 LYS170 TRP171 GLY172 PHE173 THR174 ALA175 TYR176 ASN177 ARG178 GLU179 ALA180 TYR181 GLN182 LYS183 LEU184 LYS185 ALA186 ASP187 GLY188 ARG189 LEU190 MET191 ASN192 ASP193 GLY194 ALA195 ASN196 VAL197 LYS198 VAL199 ILE200 THR201 ASN202 HIS203 GLY204 THR205 LEU206 ALA207 GLN208 TYR209 ALA210 LYS211 ASP212 ILE213 ALA214 ALA215 ALA216 ASN217
Unit 7 MET1 LYS2 THR3 SER4 LEU5 CYS6 ASN7 TYR8 SER9 GLU10 PHE11 LYS12 ILE13 TYR14 PRO15 ALA16 ARG17 GLY18 MET19 LYS20 PHE21 VAL22 ARG23 GLY24 ASP25 SER26 LYS27 VAL28 PHE29 HIS30 PHE31 ILE32 ASN33 THR34 LYS35 VAL36 GLU37 SER38 LEU39 PHE40 PHE41 ARG42 LYS43 ILE44 ASN45 PRO46 ARG47 ASP48 ILE49 ARG50 TRP51 SER52 MET53 VAL54 TYR55 ARG56 ARG57 ILE58 TYR59 LYS60 ASN61 THR62 THR63 THR64 ASP65 VAL66 SER67 ALA68 LYS69
Unit 8 ILE1 GLU2 PRO3 SER4 LEU5 VAL6 ILE7 LEU8 ALA9 ARG10 LYS11 TYR12 LYS13 CYS14 ASP15 LYS16 MET17 ILE18 CYS19 ARG20 LYS21 CYS22 TYR23 ALA24 ARG25 LEU26 HIS27 PRO28 ARG29 ALA30 VAL31 ASN32 CYS33 ARG34 LYS35 LYS36 LYS37 CYS38 GLY39 HIS40 SER41 ASN42 ASN43 LEU44 ARG45 PRO46 LYS47 LYS48 LYS49 LEU50 LEU51 LYS52
Unit 9 MET1 ALA2 THR3 ARG4 LEU5 GLN6 TYR7 GLU8 ASN9 SER10 CYS11 ASP12 VAL13 GLY14 VAL15 PHE16 LEU17 LYS18 LEU19 THR20 ASN21 LYS22 TYR23 CYS24 LEU25 VAL26 GLY27 GLN28 CYS29 GLY30 SER31 LYS32 GLN33 PHE34 LEU35 HIS36 THR37 VAL38 GLU39 ASN40 ARG41 LEU42 ALA43 ASP44 HIS45 ILE46 PRO47 VAL48 VAL49 GLU50 THR51 SER52 ILE53 ALA54 GLY55 THR56 ARG57 ILE58 VAL59 GLY60 ARG61 LEU62 SER63 ALA64 GLY65 ASN66 LYS67 ASN68 GLY69 LEU70 LEU71 LEU72 PRO73 ASN74 THR75 CYS76 THR77 ASP78 GLN79 GLU80 LEU81 GLN82 GLN83 ILE84 ARG85 ASN86 SER87 LEU88 PRO89 ASP90 ASP91 VAL92 VAL93 VAL94 GLN95 ARG96 ILE97 GLU98 GLU99 LYS100 PHE101 SER102 ALA103 LEU104 GLY105 ASN106 CYS107 ILE108 ALA109 THR110 ASN111 ASP112 TYR113 VAL114 ALA115 LEU116 VAL117 HIS118 PRO119 ASP120 ILE121 ASP122 ARG123 GLU124 THR125 GLU126 GLU127 ILE128 ILE129 ALA130 ASP131 VAL132 LEU133 GLY134 VAL135 GLU136 VAL137 PHE138 ARG139 GLN140 THR141 VAL142 SER143 GLY144 ASN145 VAL146 LEU147 VAL148 GLY149 THR150 TYR151 CYS152 ALA153 LEU154 THR155 ASN156 GLN157 GLY158 ALA159 LEU160 VAL161 HIS162 PRO163 MET164 THR165 SER166 ILE167 ALA168 ASP169 GLN170 ASP171 GLU172 LEU173 SER174 SER175 LEU176 LEU177 GLN178 VAL179 PRO180 LEU181 VAL182 ALA183 GLY184 THR185 VAL186 ASN187 ARG188 GLY189 ASN190 GLU191 CYS192 VAL193 ALA194 ALA195 GLY196 CYS197 VAL198 VAL199 ASN200 ASP201 TRP202 THR203 ALA204 ILE205 VAL206 GLY207 ALA208 ASP209 THR210 THR211 ALA212 THR213 GLU214 ILE215 SER216 VAL217 ILE218 GLU219 SER220 ILE221 PHE222 ALA223 LEU224
Unit 10 MET1 SER2 ILE3 PHE4 THR5 PRO6 THR7 ASN8 GLN9 ILE10 ARG11 LEU12 THR13 ASN14 VAL15 ALA16 VAL17 VAL18 ARG19 MET20 LYS21 ARG22 ALA23 GLY24 LYS25 ARG26 PHE27 GLU28 ILE29 ALA30 CYS31 TYR32 LYS33 ASN34 LYS35 VAL36 VAL37 GLY38 TRP39 ARG40 SER41 GLY42 VAL43 GLU44 LYS45 ASP46 LEU47 ASP48 GLU49 VAL50 LEU51 GLN52 THR53 HIS54 SER55 VAL56 PHE57 VAL58 ASN59 VAL60 SER61 LYS62 GLY63 GLN64 VAL65 ALA66 LYS67 LYS68 GLU69 ASP70 LEU71 ILE72 SER73 ALA74 PHE75 GLY76 THR77 ASP78 ASP79 GLN80 THR81 GLU82 ILE83 CYS84 LYS85 GLN86 ILE87 LEU88 THR89 LYS90 GLY91 GLU92 VAL93 GLN94 VAL95 SER96 ASP97 LYS98 GLU99 ARG100 HIS101 THR102 GLN103 LEU104 GLU105 GLN106 MET107 PHE108 ARG109 ASP110 ILE111 ALA112 THR113 ILE114 VAL115 ALA116 ASP117 LYS118 CYS119 VAL120 ASN121 PRO122 GLU123 THR124 LYS125 ARG126 PRO127 TYR128 THR129 VAL130 ILE131 LEU132 ILE133 GLU134 ARG135 ALA136 MET137 LYS138 ASP139 ILE140 HIS141 TYR142 SER143 VAL144 LYS145 THR146 ASN147 LYS148 SER149 THR150 LYS151 GLN152 GLN153 ALA154 LEU155 GLU156 VAL157 ILE158 LYS159 GLN160 LEU161 LYS162 GLU163 LYS164 MET165 LYS166 ILE167 GLU168 ARG169 ALA170 HIS171 MET172 ARG173 LEU174 ARG175 PHE176 ILE177 LEU178 PRO179 VAL180 ASN181 GLU182 GLY183 LYS184 LYS185 LEU186 LYS187 GLU188 LYS189 LEU190 LYS191 PRO192 LEU193 ILE194 LYS195 VAL196 ILE197 GLU198 SER199 GLU200 ASP201 TYR202 GLY203 GLN204 GLN205 LEU206 GLU207 ILE208 VAL209 CYS210 LEU211 ILE212 ASP213 PRO214 GLY215 CYS216 PHE217 ARG218 GLU219 ILE220 ASP221 GLU222 LEU223 ILE224 LYS225 LYS226 GLU227 THR228 LYS229 GLY230 LYS231 GLY232 SER233 LEU234 GLU235 VAL236 LEU237 ASN238 LEU239 LYS240 ASP241 VAL242 GLU243 GLU244 GLY245 ASP246 GLU247 LYS248 PHE249 GLU250

Nucleic acids
Unit 11 A1221 U1222 U1223 A1224 G1225 C1226 A1227 G1228 U1229 U1230 U1231 C1232 G1233 G1234 G1235 G1236 G1237 C1238 G1239 U1240 A1241 A1242 U1243 G1244 C1245 U1246 C1247 U1248 C1249 A1250 G1251 C1252 U1253 G1254 A1255 U1256 U1257 C1258 U1259 C1260 A1261 A1262 A1263 C1264 U1265 C1266 U1267 G1268 A1269 A1270 C1356 A1357 U1358 U1359 U1360 U1361 U1362 G1363 G1364 U1365 A1366 A1367 G1368 C1369 A1370 G1371 A1372 A1373 C1374 U1375 G1376 G1377 C1378 G1379 A1380 U1381 G1382 U1383 G1384 G1385 G1386 U1387 U1388 G1389 A1390 A1391 C1392 C1393 A1394 A1395 A1396 U1397 A1398 U1399 U1400 G1401 G1402 G1403 A1404 U1405 A1406 A1407 G1408 A1409 C1410 G1411 U1412 C1413 U1414 A1415 A1416 C1417 A1418 U1419 U1420 C1421 A1422 C1423 U1424 A1425 A1426 U1427 A1428 G1429 A1430 U1431 A1432 C1433 C1434 A1435 C1436 A1437 A1438 A1439 A1440 G1441 G1442 U1443 G1444 U1445 U1446 A1447 G1448 U1449 U1450 C1451 A1452 U1453 U1454 A1455 A1456 G1457 A1458 C1459 A1460 G1461 C1462 A1463 G1464 G1465 A1466 C1467 G1468 G1469 U1470 G1471 G1472 C1473 C1474 A1475 U1476 G1477 G1478 A1479 A1480 G1481 U1482 C1483 G1484 G1485 U1486 A1487 U1488 C1489 C1490 G1491 C1492 U1493 A1494 A1495 G1496 G1497 A1498 G1499 U1500 G1501 U1502 G1503 U1504 A1505 A1506 C1507 A1508 A1509 C1510 U1511 C1512 A1513 C1514 C1515 U1516 G1517 C1518 C1519 A1520 A1521 A1522 U1523 G1524 G1525 A1526 C1527 U1528 A1529 G1530 C1531 C1532 C1533 U1534 G1535 A1536 A1537 A1538 A1539 U1540 G1541 G1542 A1543 U1544 G1545 A1546 C1547 G1548 C1549 U1550 A1551 G1552 C1553 A1554 G1555 U1556 G1557 G1558 A1559 U1560 G1561 G1562 U1563 C1564 G1565 A1566 U1567 G1568 C1569 C1570 C1571 A1572 A1573 U1574 C1575 G1576 U1577 U1578 A1579 A1580 A1581 A1582 G1583 A1584 A1585 G1586 U1587 G1588 A1589 U1590 A1591 A1592 U1593 A1594 C1595 U1596 U1597 U1598 U1599 A1600 A1601 C1602 A2392 A2393 U2394 C2395 C2396 A2397 A2398 C2399 U2400 G2401 U2402 U2403 U2404 A2405 A2406 U2407 U2408 A2409 A2410 A2411 A2412 C2413 A2414 A2415 A2416 G2417 C2418 A2419 U2420 U2421 G2422 C2423 G2424 A2425 U2426 A2427 A2428 G2429 C2430 U2431 U2432 A2433 A2434 A2435 A2436 G2437 C2438 U2439 U2440 U2441 U2442 G2443 A2444 C2445 G2446 C2447 A2448 A2449 U2450 G2451 U2452 G2453 A2454 U2455 U2456 U2457 C2458 U2459 G2460 C2461 C2462 C2463 A2464 G2465 U2466 G2467 C2468 U2469 C2470 U2471 G2472 A2473 A2474 U2475 G2476 U2477 C2478 A2479 A2480 A2481 G2482 U2483 G2484 A2485 A2486 G2487 A2488 G2489 A2490 U2491 U2492 C2493 A2494 A2495 C2496 C2497 U2498 A2499 G2500 C2501 A2502 C2503 G2504 G2505 G2506 U2507 A2508 A2509 A2510 C2511 G2512 G2513 C2514 G2515 G2516 G2517 A2518 G2519 U2520 A2521 A2522 C2523 U2524 A2525 U2526 G2527 A2528 C2529 U2530 C2531 U2532 C2533 U2534 U2535 A2536 A2537 G2538 G2539 U2540 A2541 G2542 C2543 C2544 A2545 A2546 A2547 U2548 G2549 C2550 C2551 U2552 C2553 G2554 U2555 C2556 A2557 U2558 C2559 U2560 A2561 A2562 U2563 U2564 A2565 G2566 U2567 G2568 A2569 C2570 G2571 C2572 G2573 C2574 A2575 U2576 G2577 A2578 A2579 U2580 G2581 G2582 A2583 U2584 C2585 A2586 A2587 U2588 G2589 A2590 G2591 A2592 U2593 U2594 C2595 C2596 C2597 A2598 C2599 U2600 G2601 U2602 C2603 C2604 C2605 U2606 A2607 A2608 C2609 U2610 A2611 C2612 U2613 A2614 U2615 A2616 C2617 A2618 G2619 C2620 G2621 A2622 A2623 A2624 C2625 C2626 A2627 C2628 U2629 G2630 C2631 A2632 A2633 G2634 G2635 G2636 G2637 A2638 A2639 C2640 G2641 G2642 G2643 C2644 C2645 U2646 U2647 G2648 C2649 A2650 A2651 A2652 A2653 A2654 C2655 A2656 G2657 C2658 G2659 G2660 G2661 G2662 A2663 A2664 A2665 G2666 A2667 A2668 G2669 A2670 C2671 C2672 C2673 U2674 G2675 U2676 U2677 G2678 A2679 G2680 C2681 U2682 U2683 G2684 A2685 C2686 U2687 C2688 U2689 A2690 G2691 U2692 C2693 U2694 G2695 A2696 U2697 A2698 U2699 U2700 A2925 A2926 C2927 A2928 G2929 U2930 U2931 U2932 C2933 A2934 G2935 G2936 U2937 G2938 G2939 G2940 G2941 A2942 G2943 U2944 U2945 U2946 G2947 G2948 C2949 U2950 G2951 G2952 G2953 G2954 C2955 G2956 G2957 C2958 A2959 C2960 A2961 U2962 U2963 U2964 G2965 U2966 U2967 A2968 A2969 A2970 A2971 G2972 A2973 U2974 A2975 A2976 C2977 G2978 C2979 A2980 A2981 G2982 U2983 G2984 U2985 C2986 C2987 A2988 A2989 A2990 G2991 G2992 C2993 A2994 G2995 G2996 C2997 U2998 C2999 A3000 G3001 U3002 G3003 A3004 G3005 A3006 A3007 C3008 A3009 G3010 A3011 A3012 A3013 U3014 C3015 U3016 C3017 A3018 C3019 G3020 U3021 A3022 G3023 A3024 G3025 U3026 A3027 A3028 A3029 A3030 G3031 G3032 G3033 C3034 A3035 A3036 A3037 A3038 G3039 C3040 C3041 U3042 G3043 C3044 U3045 U3046 G3047 A3048 U3049 U3050 C3051 U3052 G3053 A3054 U3055 U3056 U3057 U3058 C3059 A3060 G3061 U3062 A3063 C3064 U3065 A3066 A3067 U3068 C3069 G3070 G3071 A3072 A3073 C3074 U3075 G3076 G3077 G3078 A3079 A3080 A3081 C3082 C3083 A3084 G3085 G3086 G3087 C3088 C3089 U3090 A3091 U3092 C3093 G3094 A3095 U3096 C3097 C3098 U3099 U3100 U3101 A3102 U3103 G3104 U3105 G3106 C3107 U3108 U3109 A3110 A3111 A3112 U3113 C3114 U3115 U3116 A3117 A3118 C3119 C3120 C3121 U3122 A3123 G3124 A3125 G3126 G3127 U3128 G3129 U3130 C3131 A3132 G3133 A3134 A3135 A3136 A3137 G3138 U3139 U3140 A3141 C3142 C3143 A3144 C3145 A3146 G3147 G3148 G3149 A3150 U3151 A3152 A3153 C3154 U3155 G3156 G3157 C3158 U3159 U3160 G3161 U3162 G3163 G3164 C3165 A3166 G3167 C3168 C3169 A3170 A3171 G3172 C3173 G3174 C3175 U3176 C3177 A3178 U3179 A3180 G3181 C3182 G3183 A3184 C3185 G3186 C3187 U3188 G3189 C3190 U3191 U3192 U3193 U3194 U3195 G3196 A3197 U3198 C3199 C3200 U3201 U3202 C3203 G3204 A3205 U3206 G3207 U3208 C3209 G3210 G3211 C3212 U3213 C3214 U3215 U3216 C3217 U3218 U3219 A3220 U3221 C3222 A3223 U3224 U3225 G3226 U3227 G3228 A3229 A3230 G3231 C3232 A3233 G3234 A3235 A3236 U3237 U3238 C3239 A3240 C3241 A3242 A3243 A3244 G3245 U3246 G3247 U3248 U3249 G3250 G3251 A3252 U3253 U3254 G3255 U3256 U3257 C3258 A3259 C3260 C3261 C3262 A3263 C3264 U3265 A3266 A3267 C3268 A3269 A3270 G3271 G3272 A3273 A3274 C3275 G3276 U3277 G3278 A3279 G3280 C3281 U3282 G3283 G3284 G3285 U3286 U3287 U3288 A3289 G3290 A3291 C3292 C3293 G3294 U3295 C3296 G3297 U3298 G3299 A3300 G3301 A3302 C3303 A3304 G3305 G3306 U3307 U3308 A3309 G3310 U3311 U3312 U3313 U3314 A3315 C3316 C3317 C3318 U3319 A3320 C3321 U3322 G3323 U3324 U3325 G3326 U3327 C3328 A3329 A3330 U3331 U3332 G3333 U3334 U3335 U3336 G3337 C3338 G3339 U3340 A3341 A3342 U3343 A3344 G3345 U3346 A3347 G3348 C3349 A3350 U3351 G3352 A3353 U3354 U3355 U3356 A3357 G3358 U3359 A3360 C3361 G3362 A3363 G3364 A3365 G3366 G3367 A3368 A3369 C3370 U3371 G3372 U3373 C3374 A3375 U3376 G3377 C3378 C3379 G3380 G3381 A3382 U3383 C3384 A3385 C3386 U3387 G3388 G3389 U3390 C3391 U3392 G3393 U3394 A3395 G3396 G3397 U3398 U3399 U3400 A3401 U3402 U3403 U3404 G3405 A3406 C3407 A3408 A3409 A3410 A3411 U3412 A3413 G3414 U3415 G3416 A3417 C3418 C3419 U3420 G3421 C3422 C3423 G3424 C3425 U3426 A3427 C3428 C3429 A3430 U3431 C3432 C3433 G3434 U3435 U3436 G3437 G3438 A3439 U3440 A3441 A3442 U3443 G3444 G3445 C3446 U3447 G3448 A3449 A3450 C3451 G3452 C3453 C3454 U3455 C3456 U3457 A3458 A3459 G3460 U3461 C3462 A3463 G3464 A3465 A3466 U3467 C3468 C3469 A3470 U3471 U3472 C3473 U3474 A3475 G3476 A3477 A3478 A3479 C3480

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany