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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF VARIOLA VIRUS VIRULENCE FACTOR F1L IN COMPLEX WITH HUMAN BAK BH3 DOMAIN
Keywords BCL-2, APOPTOSIS, POXVIRUS, BID
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5AJK     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   HOMOLOG OF VACCINIA VIRUS CDS F1L  A 148 2386 0
2  Protein   BCL-2 HOMOLOGOUS ANTAGONIST/KILLER  B 23 352 0
3  Protein   HOMOLOG OF VACCINIA VIRUS CDS F1L  C 139 2244 0
4  Protein   BCL-2 HOMOLOGOUS ANTAGONIST/KILLER  D 23 341 0
5  Protein   HOMOLOG OF VACCINIA VIRUS CDS F1L  E 141 2290 0
6  Protein   BCL-2 HOMOLOGOUS ANTAGONIST/KILLER  F 23 352 0
7  Protein   HOMOLOG OF VACCINIA VIRUS CDS F1L  G 137 2222 0
8  Protein   BCL-2 HOMOLOGOUS ANTAGONIST/KILLER  H 23 352 0
9  Protein   HOMOLOG OF VACCINIA VIRUS CDS F1L  I 137 2219 0
10  Protein   BCL-2 HOMOLOGOUS ANTAGONIST/KILLER  J 24 363 0
11  Protein   HOMOLOG OF VACCINIA VIRUS CDS F1L  K 138 2233 0
12  Protein   BCL-2 HOMOLOGOUS ANTAGONIST/KILLER  L 22 341 0
13  Ligand   HOMOLOG OF VACCINIA VIRUS CDS F1L  A 2 0 2
14  Ligand   HOMOLOG OF VACCINIA VIRUS CDS F1L  C 1 0 7
15  Ligand   HOMOLOG OF VACCINIA VIRUS CDS F1L  E 1 0 7
16  Ligand   HOMOLOG OF VACCINIA VIRUS CDS F1L  G 1 0 7
17 Water     98 0 98
total       1081 15695 121

Proteins
Unit 1 HIS46 ASN47 TYR48 VAL49 TYR50 PRO51 LEU52 PRO53 GLU54 SER63 THR64 ASN65 ILE66 LEU67 ASP68 TYR69 LEU70 SER71 THR72 GLU73 ARG74 ASP75 HIS76 VAL77 MET78 MET79 ALA80 VAL81 GLN82 TYR83 TYR84 MET85 SER86 LYS87 GLN88 ARG89 LEU90 ASP91 ASP92 LEU93 TYR94 ARG95 GLN96 LEU97 PRO98 THR99 LYS100 THR101 ARG102 SER103 TYR104 ILE105 ASP106 ILE107 ILE108 ASN109 MET110 TYR111 CYS112 ASP113 LYS114 VAL115 ASN116 ASN117 ASP118 TYR119 ASN120 ARG121 ASP122 MET123 ASN124 ILE125 MET126 TYR127 ASP128 MET129 ALA130 SER131 THR132 GLU133 SER134 PHE135 THR136 VAL137 TYR138 ASP139 ILE140 ASN141 ASN142 GLU143 VAL144 ASN145 THR146 ILE147 LEU148 MET149 ASP150 ASN151 LYS152 GLY153 LEU154 GLY155 VAL156 ARG157 LEU158 ALA159 THR160 ILE161 SER162 PHE163 ILE164 THR165 GLU166 LEU167 GLY168 LYS169 ARG170 CYS171 MET172 ASN173 PRO174 VAL175 GLU176 THR177 ILE178 LYS179 MET180 PHE181 THR182 LEU183 LEU184 SER185 HIS186 THR187 ILE188 CYS189 ASP190 ASP191 CYS192 PHE193 ILE194 ASP195 TYR196 ILE197 THR198 ASP199 ILE200 SER201
Unit 2 SER68 SER69 THR70 MET71 GLY72 GLN73 VAL74 GLY75 ARG76 GLN77 LEU78 ALA79 ILE80 ILE81 GLY82 ASP83 ASP84 ILE85 ASN86 ARG87 ARG88 TYR89 ASP90
Unit 3 SER63 THR64 ASN65 ILE66 LEU67 ASP68 TYR69 LEU70 SER71 THR72 GLU73 ARG74 ASP75 HIS76 VAL77 MET78 MET79 ALA80 VAL81 GLN82 TYR83 TYR84 MET85 SER86 LYS87 GLN88 ARG89 LEU90 ASP91 ASP92 LEU93 TYR94 ARG95 GLN96 LEU97 PRO98 THR99 LYS100 THR101 ARG102 SER103 TYR104 ILE105 ASP106 ILE107 ILE108 ASN109 MET110 TYR111 CYS112 ASP113 LYS114 VAL115 ASN116 ASN117 ASP118 TYR119 ASN120 ARG121 ASP122 MET123 ASN124 ILE125 MET126 TYR127 ASP128 MET129 ALA130 SER131 THR132 GLU133 SER134 PHE135 THR136 VAL137 TYR138 ASP139 ILE140 ASN141 ASN142 GLU143 VAL144 ASN145 THR146 ILE147 LEU148 MET149 ASP150 ASN151 LYS152 GLY153 LEU154 GLY155 VAL156 ARG157 LEU158 ALA159 THR160 ILE161 SER162 PHE163 ILE164 THR165 GLU166 LEU167 GLY168 LYS169 ARG170 CYS171 MET172 ASN173 PRO174 VAL175 GLU176 THR177 ILE178 LYS179 MET180 PHE181 THR182 LEU183 LEU184 SER185 HIS186 THR187 ILE188 CYS189 ASP190 ASP191 CYS192 PHE193 ILE194 ASP195 TYR196 ILE197 THR198 ASP199 ILE200 SER201
Unit 4 SER68 SER69 THR70 MET71 GLY72 GLN73 VAL74 GLY75 ARG76 GLN77 LEU78 ALA79 ILE80 ILE81 GLY82 ASP83 ASP84 ILE85 ASN86 ARG87 ARG88 TYR89 ASP90
Unit 5 ASN47 TYR48 VAL49 TYR50 PRO51 ILE66 LEU67 ASP68 TYR69 LEU70 SER71 THR72 GLU73 ARG74 ASP75 HIS76 VAL77 MET78 MET79 ALA80 VAL81 GLN82 TYR83 TYR84 MET85 SER86 LYS87 GLN88 ARG89 LEU90 ASP91 ASP92 LEU93 TYR94 ARG95 GLN96 LEU97 PRO98 THR99 LYS100 THR101 ARG102 SER103 TYR104 ILE105 ASP106 ILE107 ILE108 ASN109 MET110 TYR111 CYS112 ASP113 LYS114 VAL115 ASN116 ASN117 ASP118 TYR119 ASN120 ARG121 ASP122 MET123 ASN124 ILE125 MET126 TYR127 ASP128 MET129 ALA130 SER131 THR132 GLU133 SER134 PHE135 THR136 VAL137 TYR138 ASP139 ILE140 ASN141 ASN142 GLU143 VAL144 ASN145 THR146 ILE147 LEU148 MET149 ASP150 ASN151 LYS152 GLY153 LEU154 GLY155 VAL156 ARG157 LEU158 ALA159 THR160 ILE161 SER162 PHE163 ILE164 THR165 GLU166 LEU167 GLY168 LYS169 ARG170 CYS171 MET172 ASN173 PRO174 VAL175 GLU176 THR177 ILE178 LYS179 MET180 PHE181 THR182 LEU183 LEU184 SER185 HIS186 THR187 ILE188 CYS189 ASP190 ASP191 CYS192 PHE193 ILE194 ASP195 TYR196 ILE197 THR198 ASP199 ILE200 SER201
Unit 6 SER68 SER69 THR70 MET71 GLY72 GLN73 VAL74 GLY75 ARG76 GLN77 LEU78 ALA79 ILE80 ILE81 GLY82 ASP83 ASP84 ILE85 ASN86 ARG87 ARG88 TYR89 ASP90
Unit 7 THR64 ASN65 ILE66 LEU67 ASP68 TYR69 LEU70 SER71 THR72 GLU73 ARG74 ASP75 HIS76 VAL77 MET78 MET79 ALA80 VAL81 GLN82 TYR83 TYR84 MET85 SER86 LYS87 GLN88 ARG89 LEU90 ASP91 ASP92 LEU93 TYR94 ARG95 GLN96 LEU97 PRO98 THR99 LYS100 THR101 ARG102 SER103 TYR104 ILE105 ASP106 ILE107 ILE108 ASN109 MET110 TYR111 CYS112 ASP113 LYS114 VAL115 ASN116 ASN117 ASP118 TYR119 ASN120 ARG121 ASP122 MET123 ASN124 ILE125 MET126 TYR127 ASP128 MET129 ALA130 SER131 THR132 GLU133 SER134 PHE135 THR136 VAL137 TYR138 ASP139 ILE140 ASN141 ASN142 GLU143 VAL144 ASN145 THR146 ILE147 LEU148 MET149 ASP150 ASN151 LYS152 GLY153 LEU154 GLY155 VAL156 ARG157 LEU158 ALA159 THR160 ILE161 SER162 PHE163 ILE164 THR165 GLU166 LEU167 GLY168 LYS169 ARG170 CYS171 MET172 ASN173 PRO174 VAL175 GLU176 THR177 ILE178 LYS179 MET180 PHE181 THR182 LEU183 LEU184 SER185 HIS186 THR187 ILE188 CYS189 ASP190 ASP191 CYS192 PHE193 ILE194 ASP195 TYR196 ILE197 THR198 ASP199 ILE200
Unit 8 SER68 SER69 THR70 MET71 GLY72 GLN73 VAL74 GLY75 ARG76 GLN77 LEU78 ALA79 ILE80 ILE81 GLY82 ASP83 ASP84 ILE85 ASN86 ARG87 ARG88 TYR89 ASP90
Unit 9 ASN65 ILE66 LEU67 ASP68 TYR69 LEU70 SER71 THR72 GLU73 ARG74 ASP75 HIS76 VAL77 MET78 MET79 ALA80 VAL81 GLN82 TYR83 TYR84 MET85 SER86 LYS87 GLN88 ARG89 LEU90 ASP91 ASP92 LEU93 TYR94 ARG95 GLN96 LEU97 PRO98 THR99 LYS100 THR101 ARG102 SER103 TYR104 ILE105 ASP106 ILE107 ILE108 ASN109 MET110 TYR111 CYS112 ASP113 LYS114 VAL115 ASN116 ASN117 ASP118 TYR119 ASN120 ARG121 ASP122 MET123 ASN124 ILE125 MET126 TYR127 ASP128 MET129 ALA130 SER131 THR132 GLU133 SER134 PHE135 THR136 VAL137 TYR138 ASP139 ILE140 ASN141 ASN142 GLU143 VAL144 ASN145 THR146 ILE147 LEU148 MET149 ASP150 ASN151 LYS152 GLY153 LEU154 GLY155 VAL156 ARG157 LEU158 ALA159 THR160 ILE161 SER162 PHE163 ILE164 THR165 GLU166 LEU167 GLY168 LYS169 ARG170 CYS171 MET172 ASN173 PRO174 VAL175 GLU176 THR177 ILE178 LYS179 MET180 PHE181 THR182 LEU183 LEU184 SER185 HIS186 THR187 ILE188 CYS189 ASP190 ASP191 CYS192 PHE193 ILE194 ASP195 TYR196 ILE197 THR198 ASP199 ILE200 SER201
Unit 10 SER68 SER69 THR70 MET71 GLY72 GLN73 VAL74 GLY75 ARG76 GLN77 LEU78 ALA79 ILE80 ILE81 GLY82 ASP83 ASP84 ILE85 ASN86 ARG87 ARG88 TYR89 ASP90 SER91
Unit 11 THR64 ASN65 ILE66 LEU67 ASP68 TYR69 LEU70 SER71 THR72 GLU73 ARG74 ASP75 HIS76 VAL77 MET78 MET79 ALA80 VAL81 GLN82 TYR83 TYR84 MET85 SER86 LYS87 GLN88 ARG89 LEU90 ASP91 ASP92 LEU93 TYR94 ARG95 GLN96 LEU97 PRO98 THR99 LYS100 THR101 ARG102 SER103 TYR104 ILE105 ASP106 ILE107 ILE108 ASN109 MET110 TYR111 CYS112 ASP113 LYS114 VAL115 ASN116 ASN117 ASP118 TYR119 ASN120 ARG121 ASP122 MET123 ASN124 ILE125 MET126 TYR127 ASP128 MET129 ALA130 SER131 THR132 GLU133 SER134 PHE135 THR136 VAL137 TYR138 ASP139 ILE140 ASN141 ASN142 GLU143 VAL144 ASN145 THR146 ILE147 LEU148 MET149 ASP150 ASN151 LYS152 GLY153 LEU154 GLY155 VAL156 ARG157 LEU158 ALA159 THR160 ILE161 SER162 PHE163 ILE164 THR165 GLU166 LEU167 GLY168 LYS169 ARG170 CYS171 MET172 ASN173 PRO174 VAL175 GLU176 THR177 ILE178 LYS179 MET180 PHE181 THR182 LEU183 LEU184 SER185 HIS186 THR187 ILE188 CYS189 ASP190 ASP191 CYS192 PHE193 ILE194 ASP195 TYR196 ILE197 THR198 ASP199 ILE200 SER201
Unit 12 SER69 THR70 MET71 GLY72 GLN73 VAL74 GLY75 ARG76 GLN77 LEU78 ALA79 ILE80 ILE81 GLY82 ASP83 ASP84 ILE85 ASN86 ARG87 ARG88 TYR89 ASP90

Ligands
Unit 13 CL1202 CL1203
Unit 14 ACT1202
Unit 15 ACT1202
Unit 16 ACT1201

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany