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Sequence, Chains, Asymmetric and Biological Units

Title CRYSTAL STRUCTURE OF FLUOROGEN-ACTIVATING DESIGNED ANKYRIN R PROTEIN (DARPIN) DIMER IN COMPLEX WITH MALACHITE GREEN
Keywords FLUORESCENT PROTEIN, HOMODIMER, DESIGNED ANKYRIN REPEAT PROT (DARPIN), FLUOROGEN-ACTIVATION, MALACHITE GREEN
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   5AAO     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   FAD3210  A 156 1201 0
2  Protein   FAD3210  B 154 1186 0
3  Protein   FAD3210  C 156 1203 0
4  Protein   FAD3210  D 154 1186 0
5  Protein   FAD3210  E 157 1209 0
6  Protein   FAD3210  F 154 1186 0
7  Protein   FAD3210  G 156 1203 0
8  Protein   FAD3210  H 154 1186 0
9  Protein   FAD3210  I 157 1209 0
10  Protein   FAD3210  J 157 1209 0
11  Protein   FAD3210  K 154 1186 0
12  Protein   FAD3210  L 155 1195 0
13  Ligand   FAD3210  A 1 0 27
14  Ligand   FAD3210  C 1 0 27
15  Ligand   FAD3210  E 1 0 27
16  Ligand   FAD3210  G 1 0 27
17  Ligand   FAD3210  J 1 0 27
18  Ligand   FAD3210  K 1 0 27
19 Water     339 0 339
total       2209 14359 501

Proteins
Unit 1 SER12 ASP13 LEU14 GLY15 LYS16 LYS17 LEU18 LEU19 GLU20 ALA21 ALA22 ARG23 ALA24 GLY25 GLN26 ASP27 ASP28 GLU29 VAL30 ARG31 ILE32 LEU33 MET34 ALA35 ASN36 GLY37 ALA38 ASP39 VAL40 ASN41 ALA42 LYS43 ASP44 SER45 ARG46 GLY47 LYS48 THR49 PRO50 LEU51 HIS52 LEU53 ALA54 ALA55 ASP56 TYR57 GLY58 TYR59 LEU60 GLU61 VAL62 ALA63 GLU64 VAL65 LEU66 LEU67 LYS68 HIS69 GLY70 ALA71 ASP72 VAL73 ASN74 ALA75 HIS76 ASP77 VAL78 TYR79 GLY80 ASP81 THR82 PRO83 LEU84 HIS85 LEU86 THR87 ALA88 THR89 TRP90 GLY91 HIS92 LEU93 GLU94 ILE95 VAL96 GLU97 VAL98 LEU99 LEU100 LYS101 ASN102 GLY103 ALA104 ASP105 ALA106 ASN107 ALA108 ILE109 ASP110 PHE111 PHE112 GLY113 TRP114 THR115 PRO116 LEU117 HIS118 LEU119 ALA120 ALA121 TYR122 PHE123 GLY124 HIS125 LEU126 GLU127 ILE128 VAL129 GLU130 VAL131 LEU132 LEU133 LYS134 TYR135 GLY136 ALA137 ASP138 VAL139 ASN140 ALA141 GLN142 ASP143 LYS144 PHE145 GLY146 LYS147 THR148 VAL149 PHE150 ASP151 ILE152 SER153 VAL154 TYR155 ASN156 GLY157 ASP158 GLU159 ASP160 LEU161 ALA162 GLU163 ILE164 LEU165 GLN166 LYS167
Unit 2 ASP13 LEU14 GLY15 LYS16 LYS17 LEU18 LEU19 GLU20 ALA21 ALA22 ARG23 ALA24 GLY25 GLN26 ASP27 ASP28 GLU29 VAL30 ARG31 ILE32 LEU33 MET34 ALA35 ASN36 GLY37 ALA38 ASP39 VAL40 ASN41 ALA42 LYS43 ASP44 SER45 ARG46 GLY47 LYS48 THR49 PRO50 LEU51 HIS52 LEU53 ALA54 ALA55 ASP56 TYR57 GLY58 TYR59 LEU60 GLU61 VAL62 ALA63 GLU64 VAL65 LEU66 LEU67 LYS68 HIS69 GLY70 ALA71 ASP72 VAL73 ASN74 ALA75 HIS76 ASP77 VAL78 TYR79 GLY80 ASP81 THR82 PRO83 LEU84 HIS85 LEU86 THR87 ALA88 THR89 TRP90 GLY91 HIS92 LEU93 GLU94 ILE95 VAL96 GLU97 VAL98 LEU99 LEU100 LYS101 ASN102 GLY103 ALA104 ASP105 ALA106 ASN107 ALA108 ILE109 ASP110 PHE111 PHE112 GLY113 TRP114 THR115 PRO116 LEU117 HIS118 LEU119 ALA120 ALA121 TYR122 PHE123 GLY124 HIS125 LEU126 GLU127 ILE128 VAL129 GLU130 VAL131 LEU132 LEU133 LYS134 TYR135 GLY136 ALA137 ASP138 VAL139 ASN140 ALA141 GLN142 ASP143 LYS144 PHE145 GLY146 LYS147 THR148 VAL149 PHE150 ASP151 ILE152 SER153 VAL154 TYR155 ASN156 GLY157 ASP158 GLU159 ASP160 LEU161 ALA162 GLU163 ILE164 LEU165 GLN166
Unit 3 ASP13 LEU14 GLY15 LYS16 LYS17 LEU18 LEU19 GLU20 ALA21 ALA22 ARG23 ALA24 GLY25 GLN26 ASP27 ASP28 GLU29 VAL30 ARG31 ILE32 LEU33 MET34 ALA35 ASN36 GLY37 ALA38 ASP39 VAL40 ASN41 ALA42 LYS43 ASP44 SER45 ARG46 GLY47 LYS48 THR49 PRO50 LEU51 HIS52 LEU53 ALA54 ALA55 ASP56 TYR57 GLY58 TYR59 LEU60 GLU61 VAL62 ALA63 GLU64 VAL65 LEU66 LEU67 LYS68 HIS69 GLY70 ALA71 ASP72 VAL73 ASN74 ALA75 HIS76 ASP77 VAL78 TYR79 GLY80 ASP81 THR82 PRO83 LEU84 HIS85 LEU86 THR87 ALA88 THR89 TRP90 GLY91 HIS92 LEU93 GLU94 ILE95 VAL96 GLU97 VAL98 LEU99 LEU100 LYS101 ASN102 GLY103 ALA104 ASP105 ALA106 ASN107 ALA108 ILE109 ASP110 PHE111 PHE112 GLY113 TRP114 THR115 PRO116 LEU117 HIS118 LEU119 ALA120 ALA121 TYR122 PHE123 GLY124 HIS125 LEU126 GLU127 ILE128 VAL129 GLU130 VAL131 LEU132 LEU133 LYS134 TYR135 GLY136 ALA137 ASP138 VAL139 ASN140 ALA141 GLN142 ASP143 LYS144 PHE145 GLY146 LYS147 THR148 VAL149 PHE150 ASP151 ILE152 SER153 VAL154 TYR155 ASN156 GLY157 ASP158 GLU159 ASP160 LEU161 ALA162 GLU163 ILE164 LEU165 GLN166 LYS167 LEU168
Unit 4 ASP13 LEU14 GLY15 LYS16 LYS17 LEU18 LEU19 GLU20 ALA21 ALA22 ARG23 ALA24 GLY25 GLN26 ASP27 ASP28 GLU29 VAL30 ARG31 ILE32 LEU33 MET34 ALA35 ASN36 GLY37 ALA38 ASP39 VAL40 ASN41 ALA42 LYS43 ASP44 SER45 ARG46 GLY47 LYS48 THR49 PRO50 LEU51 HIS52 LEU53 ALA54 ALA55 ASP56 TYR57 GLY58 TYR59 LEU60 GLU61 VAL62 ALA63 GLU64 VAL65 LEU66 LEU67 LYS68 HIS69 GLY70 ALA71 ASP72 VAL73 ASN74 ALA75 HIS76 ASP77 VAL78 TYR79 GLY80 ASP81 THR82 PRO83 LEU84 HIS85 LEU86 THR87 ALA88 THR89 TRP90 GLY91 HIS92 LEU93 GLU94 ILE95 VAL96 GLU97 VAL98 LEU99 LEU100 LYS101 ASN102 GLY103 ALA104 ASP105 ALA106 ASN107 ALA108 ILE109 ASP110 PHE111 PHE112 GLY113 TRP114 THR115 PRO116 LEU117 HIS118 LEU119 ALA120 ALA121 TYR122 PHE123 GLY124 HIS125 LEU126 GLU127 ILE128 VAL129 GLU130 VAL131 LEU132 LEU133 LYS134 TYR135 GLY136 ALA137 ASP138 VAL139 ASN140 ALA141 GLN142 ASP143 LYS144 PHE145 GLY146 LYS147 THR148 VAL149 PHE150 ASP151 ILE152 SER153 VAL154 TYR155 ASN156 GLY157 ASP158 GLU159 ASP160 LEU161 ALA162 GLU163 ILE164 LEU165 GLN166
Unit 5 SER12 ASP13 LEU14 GLY15 LYS16 LYS17 LEU18 LEU19 GLU20 ALA21 ALA22 ARG23 ALA24 GLY25 GLN26 ASP27 ASP28 GLU29 VAL30 ARG31 ILE32 LEU33 MET34 ALA35 ASN36 GLY37 ALA38 ASP39 VAL40 ASN41 ALA42 LYS43 ASP44 SER45 ARG46 GLY47 LYS48 THR49 PRO50 LEU51 HIS52 LEU53 ALA54 ALA55 ASP56 TYR57 GLY58 TYR59 LEU60 GLU61 VAL62 ALA63 GLU64 VAL65 LEU66 LEU67 LYS68 HIS69 GLY70 ALA71 ASP72 VAL73 ASN74 ALA75 HIS76 ASP77 VAL78 TYR79 GLY80 ASP81 THR82 PRO83 LEU84 HIS85 LEU86 THR87 ALA88 THR89 TRP90 GLY91 HIS92 LEU93 GLU94 ILE95 VAL96 GLU97 VAL98 LEU99 LEU100 LYS101 ASN102 GLY103 ALA104 ASP105 ALA106 ASN107 ALA108 ILE109 ASP110 PHE111 PHE112 GLY113 TRP114 THR115 PRO116 LEU117 HIS118 LEU119 ALA120 ALA121 TYR122 PHE123 GLY124 HIS125 LEU126 GLU127 ILE128 VAL129 GLU130 VAL131 LEU132 LEU133 LYS134 TYR135 GLY136 ALA137 ASP138 VAL139 ASN140 ALA141 GLN142 ASP143 LYS144 PHE145 GLY146 LYS147 THR148 VAL149 PHE150 ASP151 ILE152 SER153 VAL154 TYR155 ASN156 GLY157 ASP158 GLU159 ASP160 LEU161 ALA162 GLU163 ILE164 LEU165 GLN166 LYS167 LEU168
Unit 6 ASP13 LEU14 GLY15 LYS16 LYS17 LEU18 LEU19 GLU20 ALA21 ALA22 ARG23 ALA24 GLY25 GLN26 ASP27 ASP28 GLU29 VAL30 ARG31 ILE32 LEU33 MET34 ALA35 ASN36 GLY37 ALA38 ASP39 VAL40 ASN41 ALA42 LYS43 ASP44 SER45 ARG46 GLY47 LYS48 THR49 PRO50 LEU51 HIS52 LEU53 ALA54 ALA55 ASP56 TYR57 GLY58 TYR59 LEU60 GLU61 VAL62 ALA63 GLU64 VAL65 LEU66 LEU67 LYS68 HIS69 GLY70 ALA71 ASP72 VAL73 ASN74 ALA75 HIS76 ASP77 VAL78 TYR79 GLY80 ASP81 THR82 PRO83 LEU84 HIS85 LEU86 THR87 ALA88 THR89 TRP90 GLY91 HIS92 LEU93 GLU94 ILE95 VAL96 GLU97 VAL98 LEU99 LEU100 LYS101 ASN102 GLY103 ALA104 ASP105 ALA106 ASN107 ALA108 ILE109 ASP110 PHE111 PHE112 GLY113 TRP114 THR115 PRO116 LEU117 HIS118 LEU119 ALA120 ALA121 TYR122 PHE123 GLY124 HIS125 LEU126 GLU127 ILE128 VAL129 GLU130 VAL131 LEU132 LEU133 LYS134 TYR135 GLY136 ALA137 ASP138 VAL139 ASN140 ALA141 GLN142 ASP143 LYS144 PHE145 GLY146 LYS147 THR148 VAL149 PHE150 ASP151 ILE152 SER153 VAL154 TYR155 ASN156 GLY157 ASP158 GLU159 ASP160 LEU161 ALA162 GLU163 ILE164 LEU165 GLN166
Unit 7 ASP13 LEU14 GLY15 LYS16 LYS17 LEU18 LEU19 GLU20 ALA21 ALA22 ARG23 ALA24 GLY25 GLN26 ASP27 ASP28 GLU29 VAL30 ARG31 ILE32 LEU33 MET34 ALA35 ASN36 GLY37 ALA38 ASP39 VAL40 ASN41 ALA42 LYS43 ASP44 SER45 ARG46 GLY47 LYS48 THR49 PRO50 LEU51 HIS52 LEU53 ALA54 ALA55 ASP56 TYR57 GLY58 TYR59 LEU60 GLU61 VAL62 ALA63 GLU64 VAL65 LEU66 LEU67 LYS68 HIS69 GLY70 ALA71 ASP72 VAL73 ASN74 ALA75 HIS76 ASP77 VAL78 TYR79 GLY80 ASP81 THR82 PRO83 LEU84 HIS85 LEU86 THR87 ALA88 THR89 TRP90 GLY91 HIS92 LEU93 GLU94 ILE95 VAL96 GLU97 VAL98 LEU99 LEU100 LYS101 ASN102 GLY103 ALA104 ASP105 ALA106 ASN107 ALA108 ILE109 ASP110 PHE111 PHE112 GLY113 TRP114 THR115 PRO116 LEU117 HIS118 LEU119 ALA120 ALA121 TYR122 PHE123 GLY124 HIS125 LEU126 GLU127 ILE128 VAL129 GLU130 VAL131 LEU132 LEU133 LYS134 TYR135 GLY136 ALA137 ASP138 VAL139 ASN140 ALA141 GLN142 ASP143 LYS144 PHE145 GLY146 LYS147 THR148 VAL149 PHE150 ASP151 ILE152 SER153 VAL154 TYR155 ASN156 GLY157 ASP158 GLU159 ASP160 LEU161 ALA162 GLU163 ILE164 LEU165 GLN166 LYS167 LEU168
Unit 8 ASP13 LEU14 GLY15 LYS16 LYS17 LEU18 LEU19 GLU20 ALA21 ALA22 ARG23 ALA24 GLY25 GLN26 ASP27 ASP28 GLU29 VAL30 ARG31 ILE32 LEU33 MET34 ALA35 ASN36 GLY37 ALA38 ASP39 VAL40 ASN41 ALA42 LYS43 ASP44 SER45 ARG46 GLY47 LYS48 THR49 PRO50 LEU51 HIS52 LEU53 ALA54 ALA55 ASP56 TYR57 GLY58 TYR59 LEU60 GLU61 VAL62 ALA63 GLU64 VAL65 LEU66 LEU67 LYS68 HIS69 GLY70 ALA71 ASP72 VAL73 ASN74 ALA75 HIS76 ASP77 VAL78 TYR79 GLY80 ASP81 THR82 PRO83 LEU84 HIS85 LEU86 THR87 ALA88 THR89 TRP90 GLY91 HIS92 LEU93 GLU94 ILE95 VAL96 GLU97 VAL98 LEU99 LEU100 LYS101 ASN102 GLY103 ALA104 ASP105 ALA106 ASN107 ALA108 ILE109 ASP110 PHE111 PHE112 GLY113 TRP114 THR115 PRO116 LEU117 HIS118 LEU119 ALA120 ALA121 TYR122 PHE123 GLY124 HIS125 LEU126 GLU127 ILE128 VAL129 GLU130 VAL131 LEU132 LEU133 LYS134 TYR135 GLY136 ALA137 ASP138 VAL139 ASN140 ALA141 GLN142 ASP143 LYS144 PHE145 GLY146 LYS147 THR148 VAL149 PHE150 ASP151 ILE152 SER153 VAL154 TYR155 ASN156 GLY157 ASP158 GLU159 ASP160 LEU161 ALA162 GLU163 ILE164 LEU165 GLN166
Unit 9 SER12 ASP13 LEU14 GLY15 LYS16 LYS17 LEU18 LEU19 GLU20 ALA21 ALA22 ARG23 ALA24 GLY25 GLN26 ASP27 ASP28 GLU29 VAL30 ARG31 ILE32 LEU33 MET34 ALA35 ASN36 GLY37 ALA38 ASP39 VAL40 ASN41 ALA42 LYS43 ASP44 SER45 ARG46 GLY47 LYS48 THR49 PRO50 LEU51 HIS52 LEU53 ALA54 ALA55 ASP56 TYR57 GLY58 TYR59 LEU60 GLU61 VAL62 ALA63 GLU64 VAL65 LEU66 LEU67 LYS68 HIS69 GLY70 ALA71 ASP72 VAL73 ASN74 ALA75 HIS76 ASP77 VAL78 TYR79 GLY80 ASP81 THR82 PRO83 LEU84 HIS85 LEU86 THR87 ALA88 THR89 TRP90 GLY91 HIS92 LEU93 GLU94 ILE95 VAL96 GLU97 VAL98 LEU99 LEU100 LYS101 ASN102 GLY103 ALA104 ASP105 ALA106 ASN107 ALA108 ILE109 ASP110 PHE111 PHE112 GLY113 TRP114 THR115 PRO116 LEU117 HIS118 LEU119 ALA120 ALA121 TYR122 PHE123 GLY124 HIS125 LEU126 GLU127 ILE128 VAL129 GLU130 VAL131 LEU132 LEU133 LYS134 TYR135 GLY136 ALA137 ASP138 VAL139 ASN140 ALA141 GLN142 ASP143 LYS144 PHE145 GLY146 LYS147 THR148 VAL149 PHE150 ASP151 ILE152 SER153 VAL154 TYR155 ASN156 GLY157 ASP158 GLU159 ASP160 LEU161 ALA162 GLU163 ILE164 LEU165 GLN166 LYS167 LEU168
Unit 10 SER12 ASP13 LEU14 GLY15 LYS16 LYS17 LEU18 LEU19 GLU20 ALA21 ALA22 ARG23 ALA24 GLY25 GLN26 ASP27 ASP28 GLU29 VAL30 ARG31 ILE32 LEU33 MET34 ALA35 ASN36 GLY37 ALA38 ASP39 VAL40 ASN41 ALA42 LYS43 ASP44 SER45 ARG46 GLY47 LYS48 THR49 PRO50 LEU51 HIS52 LEU53 ALA54 ALA55 ASP56 TYR57 GLY58 TYR59 LEU60 GLU61 VAL62 ALA63 GLU64 VAL65 LEU66 LEU67 LYS68 HIS69 GLY70 ALA71 ASP72 VAL73 ASN74 ALA75 HIS76 ASP77 VAL78 TYR79 GLY80 ASP81 THR82 PRO83 LEU84 HIS85 LEU86 THR87 ALA88 THR89 TRP90 GLY91 HIS92 LEU93 GLU94 ILE95 VAL96 GLU97 VAL98 LEU99 LEU100 LYS101 ASN102 GLY103 ALA104 ASP105 ALA106 ASN107 ALA108 ILE109 ASP110 PHE111 PHE112 GLY113 TRP114 THR115 PRO116 LEU117 HIS118 LEU119 ALA120 ALA121 TYR122 PHE123 GLY124 HIS125 LEU126 GLU127 ILE128 VAL129 GLU130 VAL131 LEU132 LEU133 LYS134 TYR135 GLY136 ALA137 ASP138 VAL139 ASN140 ALA141 GLN142 ASP143 LYS144 PHE145 GLY146 LYS147 THR148 VAL149 PHE150 ASP151 ILE152 SER153 VAL154 TYR155 ASN156 GLY157 ASP158 GLU159 ASP160 LEU161 ALA162 GLU163 ILE164 LEU165 GLN166 LYS167 LEU168
Unit 11 ASP13 LEU14 GLY15 LYS16 LYS17 LEU18 LEU19 GLU20 ALA21 ALA22 ARG23 ALA24 GLY25 GLN26 ASP27 ASP28 GLU29 VAL30 ARG31 ILE32 LEU33 MET34 ALA35 ASN36 GLY37 ALA38 ASP39 VAL40 ASN41 ALA42 LYS43 ASP44 SER45 ARG46 GLY47 LYS48 THR49 PRO50 LEU51 HIS52 LEU53 ALA54 ALA55 ASP56 TYR57 GLY58 TYR59 LEU60 GLU61 VAL62 ALA63 GLU64 VAL65 LEU66 LEU67 LYS68 HIS69 GLY70 ALA71 ASP72 VAL73 ASN74 ALA75 HIS76 ASP77 VAL78 TYR79 GLY80 ASP81 THR82 PRO83 LEU84 HIS85 LEU86 THR87 ALA88 THR89 TRP90 GLY91 HIS92 LEU93 GLU94 ILE95 VAL96 GLU97 VAL98 LEU99 LEU100 LYS101 ASN102 GLY103 ALA104 ASP105 ALA106 ASN107 ALA108 ILE109 ASP110 PHE111 PHE112 GLY113 TRP114 THR115 PRO116 LEU117 HIS118 LEU119 ALA120 ALA121 TYR122 PHE123 GLY124 HIS125 LEU126 GLU127 ILE128 VAL129 GLU130 VAL131 LEU132 LEU133 LYS134 TYR135 GLY136 ALA137 ASP138 VAL139 ASN140 ALA141 GLN142 ASP143 LYS144 PHE145 GLY146 LYS147 THR148 VAL149 PHE150 ASP151 ILE152 SER153 VAL154 TYR155 ASN156 GLY157 ASP158 GLU159 ASP160 LEU161 ALA162 GLU163 ILE164 LEU165 GLN166
Unit 12 ASP13 LEU14 GLY15 LYS16 LYS17 LEU18 LEU19 GLU20 ALA21 ALA22 ARG23 ALA24 GLY25 GLN26 ASP27 ASP28 GLU29 VAL30 ARG31 ILE32 LEU33 MET34 ALA35 ASN36 GLY37 ALA38 ASP39 VAL40 ASN41 ALA42 LYS43 ASP44 SER45 ARG46 GLY47 LYS48 THR49 PRO50 LEU51 HIS52 LEU53 ALA54 ALA55 ASP56 TYR57 GLY58 TYR59 LEU60 GLU61 VAL62 ALA63 GLU64 VAL65 LEU66 LEU67 LYS68 HIS69 GLY70 ALA71 ASP72 VAL73 ASN74 ALA75 HIS76 ASP77 VAL78 TYR79 GLY80 ASP81 THR82 PRO83 LEU84 HIS85 LEU86 THR87 ALA88 THR89 TRP90 GLY91 HIS92 LEU93 GLU94 ILE95 VAL96 GLU97 VAL98 LEU99 LEU100 LYS101 ASN102 GLY103 ALA104 ASP105 ALA106 ASN107 ALA108 ILE109 ASP110 PHE111 PHE112 GLY113 TRP114 THR115 PRO116 LEU117 HIS118 LEU119 ALA120 ALA121 TYR122 PHE123 GLY124 HIS125 LEU126 GLU127 ILE128 VAL129 GLU130 VAL131 LEU132 LEU133 LYS134 TYR135 GLY136 ALA137 ASP138 VAL139 ASN140 ALA141 GLN142 ASP143 LYS144 PHE145 GLY146 LYS147 THR148 VAL149 PHE150 ASP151 ILE152 SER153 VAL154 TYR155 ASN156 GLY157 ASP158 GLU159 ASP160 LEU161 ALA162 GLU163 ILE164 LEU165 GLN166 LYS167

Ligands
Unit 13 6FE1168
Unit 14 6FE1169
Unit 15 6FE1169
Unit 16 6FE1169
Unit 17 6FE1169
Unit 18 6FE1167

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany