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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURAL BASIS FOR INHIBITION OF HUMAN AUTOTAXIN BY FOUR N COMPOUNDS
Keywords AUTOTAXIN, ENPP2, INHIBITOR, HYDROLASE-HYDROLASE INHIBITOR C
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4ZG6     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE MEMBER 2  A 754 5970 0
2  Protein   ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE MEMBER 2  B 756 5987 0
3  Ligand    C 3 0 39
4  Ligand    D 3 0 39
5  Ligand   ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE MEMBER 2  A 14 0 63
6  Ligand   ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE MEMBER 2  B 12 0 57
7 Water     614 0 614
total       2156 11957 812
Proteins
Unit 1 GLY57 SER58 CYS59 LYS60 GLY61 ARG62 CYS63 PHE64 GLU65 LEU66 CYS74 ARG75 CYS76 ASP77 ASN78 LEU79 CYS80 LYS81 SER82 TYR83 THR84 SER85 CYS86 CYS87 HIS88 ASP89 PHE90 ASP91 GLU92 LEU93 CYS94 LEU95 LYS96 THR97 ALA98 ARG99 GLY100 TRP101 GLU102 CYS103 THR104 LYS105 ASP106 ARG107 CYS108 GLY109 GLU110 VAL111 ARG112 ASN113 GLU114 GLU115 ASN116 ALA117 CYS118 HIS119 CYS120 SER121 GLU122 ASP123 CYS124 LEU125 ALA126 ARG127 GLY128 ASP129 CYS130 CYS131 THR132 ASN133 TYR134 GLN135 VAL136 VAL137 CYS138 LYS139 GLY140 GLU141 SER142 HIS143 TRP144 VAL145 ASP146 ASP147 ASP148 CYS149 GLU150 GLU151 ILE152 LYS153 ALA154 ALA155 GLU156 CYS157 PRO158 ALA159 GLY160 PHE161 VAL162 ARG163 PRO164 PRO165 LEU166 ILE167 ILE168 PHE169 SER170 VAL171 ASP172 GLY173 PHE174 ARG175 ALA176 SER177 TYR178 MET179 LYS180 LYS181 GLY182 SER183 LYS184 VAL185 MET186 PRO187 ASN188 ILE189 GLU190 LYS191 LEU192 ARG193 SER194 CYS195 GLY196 THR197 HIS198 SER199 PRO200 TYR201 MET202 ARG203 PRO204 VAL205 TYR206 PRO207 THR208 LYS209 THR210 PHE211 PRO212 ASN213 LEU214 TYR215 THR216 LEU217 ALA218 THR219 GLY220 LEU221 TYR222 PRO223 GLU224 SER225 HIS226 GLY227 ILE228 VAL229 GLY230 ASN231 SER232 MET233 TYR234 ASP235 PRO236 VAL237 PHE238 ASP239 ALA240 THR241 PHE242 HIS243 LEU244 ARG245 GLY246 ARG247 GLU248 LYS249 PHE250 ASN251 HIS252 ARG253 TRP254 TRP255 GLY256 GLY257 GLN258 PRO259 LEU260 TRP261 ILE262 THR263 ALA264 THR265 LYS266 GLN267 GLY268 VAL269 LYS270 ALA271 GLY272 THR273 PHE274 PHE275 TRP276 SER277 VAL278 VAL279 ILE280 PRO281 HIS282 GLU283 ARG284 ARG285 ILE286 LEU287 THR288 ILE289 LEU290 GLN291 TRP292 LEU293 THR294 LEU295 PRO296 ASP297 HIS298 GLU299 ARG300 PRO301 SER302 VAL303 TYR304 ALA305 PHE306 TYR307 SER308 GLU309 GLN310 PRO311 ASP312 PHE313 SER314 GLY315 HIS316 LYS317 TYR318 GLY319 PRO320 PHE321 GLY322 PRO323 GLU324 MET325 THR326 ASN327 PRO328 LEU329 ARG330 GLU331 ILE332 ASP333 LYS334 ILE335 VAL336 GLY337 GLN338 LEU339 MET340 ASP341 GLY342 LEU343 LYS344 GLN345 LEU346 LYS347 LEU348 HIS349 ARG350 CYS351 VAL352 ASN353 VAL354 ILE355 PHE356 VAL357 GLY358 ASP359 HIS360 GLY361 MET362 GLU363 ASP364 VAL365 THR366 CYS367 ASP368 ARG369 THR370 GLU371 PHE372 LEU373 SER374 ASN375 TYR376 LEU377 THR378 ASN379 VAL380 ASP381 ASP382 ILE383 THR384 LEU385 VAL386 PRO387 GLY388 THR389 LEU390 GLY391 ARG392 ILE393 ARG394 SER395 LYS396 PHE397 SER398 ASN399 ASN400 ALA401 LYS402 TYR403 ASP404 PRO405 LYS406 ALA407 ILE408 ILE409 ALA410 ALA411 LEU412 THR413 CYS414 LYS415 LYS416 PRO417 ASP418 GLN419 HIS420 PHE421 LYS422 PRO423 TYR424 LEU425 LYS426 GLN427 HIS428 LEU429 PRO430 LYS431 ARG432 LEU433 HIS434 TYR435 ALA436 ASN437 ASN438 ARG439 ARG440 ILE441 GLU442 ASP443 ILE444 HIS445 LEU446 LEU447 VAL448 GLU449 ARG450 ARG451 TRP452 HIS453 VAL454 ALA455 ARG456 LYS457 PRO458 PHE470 PHE471 GLN472 GLY473 ASP474 HIS475 GLY476 PHE477 ASP478 ASN479 LYS480 VAL481 ASN482 SER483 MET484 GLN485 THR486 VAL487 PHE488 VAL489 GLY490 TYR491 GLY492 SER493 THR494 PHE495 LYS496 TYR497 LYS498 THR499 LYS500 VAL501 PRO502 PRO503 PHE504 GLU505 ASN506 ILE507 GLU508 LEU509 TYR510 ASN511 VAL512 MET513 CYS514 ASP515 LEU516 LEU517 GLY518 LEU519 LYS520 PRO521 ALA522 PRO523 ASN524 ASN525 GLY526 THR527 HIS528 GLY529 SER530 LEU531 ASN532 HIS533 LEU534 LEU535 ARG536 THR537 ASN538 THR539 PHE540 ARG541 PRO542 THR543 MET544 PRO545 GLU546 GLU547 VAL548 THR549 ARG550 PRO551 ASN552 TYR553 PRO554 GLY555 ILE556 MET557 TYR558 LEU559 GLN560 SER561 ASP562 PHE563 ASP564 LEU565 GLY566 THR592 GLU593 GLU594 ARG595 HIS596 LEU597 LEU598 TYR599 GLY600 ARG601 PRO602 ALA603 VAL604 LEU605 TYR606 ARG607 THR608 ARG609 TYR610 ASP611 ILE612 LEU613 TYR614 HIS615 THR616 ASP617 PHE618 GLU619 SER620 GLY621 TYR622 SER623 GLU624 ILE625 PHE626 LEU627 MET628 PRO629 LEU630 TRP631 THR632 SER633 TYR634 THR635 VAL636 SER637 LYS638 GLN639 ALA640 GLU641 VAL642 SER643 SER651 CYS652 VAL653 ARG654 PRO655 ASP656 VAL657 ARG658 VAL659 SER660 PRO661 SER662 PHE663 SER664 GLN665 ASN666 CYS667 LEU668 ALA669 TYR670 LYS671 ASN672 ASP673 LYS674 GLN675 MET676 SER677 TYR678 GLY679 PHE680 LEU681 PHE682 PRO683 PRO684 TYR685 LEU686 SER687 SER688 SER689 PRO690 GLU691 ALA692 LYS693 TYR694 ASP695 ALA696 PHE697 LEU698 VAL699 THR700 ASN701 MET702 VAL703 PRO704 MET705 TYR706 PRO707 ALA708 PHE709 LYS710 ARG711 VAL712 TRP713 ASN714 TYR715 PHE716 GLN717 ARG718 VAL719 LEU720 VAL721 LYS722 LYS723 TYR724 ALA725 SER726 GLU727 ARG728 ASN729 GLY730 VAL731 ASN732 VAL733 ILE734 SER735 GLY736 PRO737 ILE738 PHE739 ASP740 TYR741 ASP742 TYR743 ASP744 GLY745 LEU746 HIS747 ASP748 THR749 GLU750 ASP751 LYS752 ILE753 LYS754 GLN755 TYR756 VAL757 GLU758 GLY759 SER760 SER761 ILE762 PRO763 VAL764 PRO765 THR766 HIS767 TYR768 TYR769 SER770 ILE771 ILE772 THR773 SER774 CYS775 LEU776 ASP777 PHE778 THR779 GLN780 PRO781 ALA782 ASP783 LYS784 CYS785 ASP786 GLY787 PRO788 LEU789 SER790 VAL791 SER792 SER793 PHE794 ILE795 LEU796 PRO797 HIS798 ARG799 PRO800 ASP801 ASN802 GLU803 GLU804 SER805 CYS806 ASN807 SER808 SER809 GLU810 ASP811 GLU812 SER813 LYS814 TRP815 VAL816 GLU817 GLU818 LEU819 MET820 LYS821 MET822 HIS823 THR824 ALA825 ARG826 VAL827 ARG828 ASP829 ILE830 GLU831 HIS832 LEU833 THR834 SER835 LEU836 ASP837 PHE838 PHE839 ARG840 LYS841 THR842 SER843 ARG844 SER845 TYR846 PRO847 GLU848 ILE849 LEU850 THR851 LEU852 LYS853 THR854 TYR855 LEU856 HIS857 THR858 TYR859 GLU860
Unit 2 GLY57 SER58 CYS59 LYS60 GLY61 ARG62 CYS63 PHE64 GLU65 LEU66 CYS74 ARG75 CYS76 ASP77 ASN78 LEU79 CYS80 LYS81 SER82 TYR83 THR84 SER85 CYS86 CYS87 HIS88 ASP89 PHE90 ASP91 GLU92 LEU93 CYS94 LEU95 LYS96 THR97 ALA98 ARG99 GLY100 TRP101 GLU102 CYS103 THR104 LYS105 ASP106 ARG107 CYS108 GLY109 GLU110 VAL111 ARG112 ASN113 GLU114 GLU115 ASN116 ALA117 CYS118 HIS119 CYS120 SER121 GLU122 ASP123 CYS124 LEU125 ALA126 ARG127 GLY128 ASP129 CYS130 CYS131 THR132 ASN133 TYR134 GLN135 VAL136 VAL137 CYS138 LYS139 GLY140 GLU141 SER142 HIS143 TRP144 VAL145 ASP146 ASP147 ASP148 CYS149 GLU150 GLU151 ILE152 LYS153 ALA154 ALA155 GLU156 CYS157 PRO158 ALA159 GLY160 PHE161 VAL162 ARG163 PRO164 PRO165 LEU166 ILE167 ILE168 PHE169 SER170 VAL171 ASP172 GLY173 PHE174 ARG175 ALA176 SER177 TYR178 MET179 LYS180 LYS181 GLY182 SER183 LYS184 VAL185 MET186 PRO187 ASN188 ILE189 GLU190 LYS191 LEU192 ARG193 SER194 CYS195 GLY196 THR197 HIS198 SER199 PRO200 TYR201 MET202 ARG203 PRO204 VAL205 TYR206 PRO207 THR208 LYS209 THR210 PHE211 PRO212 ASN213 LEU214 TYR215 THR216 LEU217 ALA218 THR219 GLY220 LEU221 TYR222 PRO223 GLU224 SER225 HIS226 GLY227 ILE228 VAL229 GLY230 ASN231 SER232 MET233 TYR234 ASP235 PRO236 VAL237 PHE238 ASP239 ALA240 THR241 PHE242 HIS243 LEU244 ARG245 GLY246 ARG247 GLU248 LYS249 PHE250 ASN251 HIS252 ARG253 TRP254 TRP255 GLY256 GLY257 GLN258 PRO259 LEU260 TRP261 ILE262 THR263 ALA264 THR265 LYS266 GLN267 GLY268 VAL269 LYS270 ALA271 GLY272 THR273 PHE274 PHE275 TRP276 SER277 VAL278 VAL279 ILE280 PRO281 HIS282 GLU283 ARG284 ARG285 ILE286 LEU287 THR288 ILE289 LEU290 GLN291 TRP292 LEU293 THR294 LEU295 PRO296 ASP297 HIS298 GLU299 ARG300 PRO301 SER302 VAL303 TYR304 ALA305 PHE306 TYR307 SER308 GLU309 GLN310 PRO311 ASP312 PHE313 SER314 GLY315 HIS316 LYS317 TYR318 GLY319 PRO320 PHE321 GLY322 PRO323 GLU324 MET325 THR326 ASN327 PRO328 LEU329 ARG330 GLU331 ILE332 ASP333 LYS334 ILE335 VAL336 GLY337 GLN338 LEU339 MET340 ASP341 GLY342 LEU343 LYS344 GLN345 LEU346 LYS347 LEU348 HIS349 ARG350 CYS351 VAL352 ASN353 VAL354 ILE355 PHE356 VAL357 GLY358 ASP359 HIS360 GLY361 MET362 GLU363 ASP364 VAL365 THR366 CYS367 ASP368 ARG369 THR370 GLU371 PHE372 LEU373 SER374 ASN375 TYR376 LEU377 THR378 ASN379 VAL380 ASP381 ASP382 ILE383 THR384 LEU385 VAL386 PRO387 GLY388 THR389 LEU390 GLY391 ARG392 ILE393 ARG394 SER395 LYS396 PHE397 SER398 ASN399 ASN400 ALA401 LYS402 TYR403 ASP404 PRO405 LYS406 ALA407 ILE408 ILE409 ALA410 ALA411 LEU412 THR413 CYS414 LYS415 LYS416 PRO417 ASP418 GLN419 HIS420 PHE421 LYS422 PRO423 TYR424 LEU425 LYS426 GLN427 HIS428 LEU429 PRO430 LYS431 ARG432 LEU433 HIS434 TYR435 ALA436 ASN437 ASN438 ARG439 ARG440 ILE441 GLU442 ASP443 ILE444 HIS445 LEU446 LEU447 VAL448 GLU449 ARG450 ARG451 TRP452 HIS453 VAL454 ALA455 ARG456 LYS457 PRO458 PHE470 PHE471 GLN472 GLY473 ASP474 HIS475 GLY476 PHE477 ASP478 ASN479 LYS480 VAL481 ASN482 SER483 MET484 GLN485 THR486 VAL487 PHE488 VAL489 GLY490 TYR491 GLY492 SER493 THR494 PHE495 LYS496 TYR497 LYS498 THR499 LYS500 VAL501 PRO502 PRO503 PHE504 GLU505 ASN506 ILE507 GLU508 LEU509 TYR510 ASN511 VAL512 MET513 CYS514 ASP515 LEU516 LEU517 GLY518 LEU519 LYS520 PRO521 ALA522 PRO523 ASN524 ASN525 GLY526 THR527 HIS528 GLY529 SER530 LEU531 ASN532 HIS533 LEU534 LEU535 ARG536 THR537 ASN538 THR539 PHE540 ARG541 PRO542 THR543 MET544 PRO545 GLU546 GLU547 VAL548 THR549 ARG550 PRO551 ASN552 TYR553 PRO554 GLY555 ILE556 MET557 TYR558 LEU559 GLN560 SER561 ASP562 PHE563 ASP564 LEU565 GLY566 CYS567 SER591 THR592 GLU593 GLU594 ARG595 HIS596 LEU597 LEU598 TYR599 GLY600 ARG601 PRO602 ALA603 VAL604 LEU605 TYR606 ARG607 THR608 ARG609 TYR610 ASP611 ILE612 LEU613 TYR614 HIS615 THR616 ASP617 PHE618 GLU619 SER620 GLY621 TYR622 SER623 GLU624 ILE625 PHE626 LEU627 MET628 PRO629 LEU630 TRP631 THR632 SER633 TYR634 THR635 VAL636 SER637 LYS638 GLN639 ALA640 GLU641 VAL642 SER643 SER651 CYS652 VAL653 ARG654 PRO655 ASP656 VAL657 ARG658 VAL659 SER660 PRO661 SER662 PHE663 SER664 GLN665 ASN666 CYS667 LEU668 ALA669 TYR670 LYS671 ASN672 ASP673 LYS674 GLN675 MET676 SER677 TYR678 GLY679 PHE680 LEU681 PHE682 PRO683 PRO684 TYR685 LEU686 SER687 SER688 SER689 PRO690 GLU691 ALA692 LYS693 TYR694 ASP695 ALA696 PHE697 LEU698 VAL699 THR700 ASN701 MET702 VAL703 PRO704 MET705 TYR706 PRO707 ALA708 PHE709 LYS710 ARG711 VAL712 TRP713 ASN714 TYR715 PHE716 GLN717 ARG718 VAL719 LEU720 VAL721 LYS722 LYS723 TYR724 ALA725 SER726 GLU727 ARG728 ASN729 GLY730 VAL731 ASN732 VAL733 ILE734 SER735 GLY736 PRO737 ILE738 PHE739 ASP740 TYR741 ASP742 TYR743 ASP744 GLY745 LEU746 HIS747 ASP748 THR749 GLU750 ASP751 LYS752 ILE753 LYS754 GLN755 TYR756 VAL757 GLU758 GLY759 SER760 SER761 ILE762 PRO763 VAL764 PRO765 THR766 HIS767 TYR768 TYR769 SER770 ILE771 ILE772 THR773 SER774 CYS775 LEU776 ASP777 PHE778 THR779 GLN780 PRO781 ALA782 ASP783 LYS784 CYS785 ASP786 GLY787 PRO788 LEU789 SER790 VAL791 SER792 SER793 PHE794 ILE795 LEU796 PRO797 HIS798 ARG799 PRO800 ASP801 ASN802 GLU803 GLU804 SER805 CYS806 ASN807 SER808 SER809 GLU810 ASP811 GLU812 SER813 LYS814 TRP815 VAL816 GLU817 GLU818 LEU819 MET820 LYS821 MET822 HIS823 THR824 ALA825 ARG826 VAL827 ARG828 ASP829 ILE830 GLU831 HIS832 LEU833 THR834 SER835 LEU836 ASP837 PHE838 PHE839 ARG840 LYS841 THR842 SER843 ARG844 SER845 TYR846 PRO847 GLU848 ILE849 LEU850 THR851 LEU852 LYS853 THR854 TYR855 LEU856 HIS857 THR858 TYR859 GLU860
Ligands
Unit 3 NAG1 NAG2 BMA3
Unit 4 NAG1 NAG2 BMA3
Unit 5 ZN904 ZN905 CA906 NA907 NA908 GOL909 4NY910 SCN911 SCN912 SCN913 SCN914 SCN915 SCN916 SCN917
Unit 6 ZN904 ZN905 NA906 CA907 NA908 GOL909 4NY910 SCN911 SCN912 SCN913 SCN914 SCN915
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany