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Sequence, Chains, Asymmetric and Biological Units

Title PAROMOMYCIN BOUND TO A LEISHMANIAL RIBOSOMAL A-SITE
Keywords A-SITE, RIBOSOME, PAROMOMYCIN, LEISHMANIA, RNA
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4ZC7     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  RNA    A 21 449 0
2  RNA    B 20 427 0
3  RNA    C 21 449 0
4  RNA    D 20 424 0
5  Ligand   RNA DUPLEX  A 1 0 31
6  Ligand   RNA DUPLEX  C 1 0 42
7 Water     3 0 4
total       87 1749 77

Nucleic acids
Unit 1 G3 C4 G5 U6 C7 G8 U9 U10 C11 C12 G13 G14 A15 A16 A17 A18 G19 U20 C21 G22 C23
Unit 2 G26 C27 G28 U29 C30 G31 U32 U33 C34 C35 G36 G37 A38 A39 A40 G42 U43 C44 G45 C46
Unit 3 G3 C4 G5 U6 C7 G8 U9 U10 C11 C12 G13 G14 A15 A16 A17 A18 G19 U20 C21 G22 C23
Unit 4 G26 C27 G28 U29 C30 G31 U32 U33 C34 C35 G36 G37 A38 A39 A40 G42 U43 C44 G45 C46

Ligands
Unit 5 PAR101
Unit 6 PAR101

Chirality of ribose and phosphate atoms

Check the naming of phosphate and ribose substituents. Recommended for phosphate oxygens and for ribose hydrogens in NMR structures.


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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany