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Title | NON-HELICAL DNA TRIPLEX FORMS A UNIQUE APTAMER SCAFFOLD FOR AFFINITY RECOGNITION OF NERVE GROWTH FACTOR | |
Keywords | COMPLEX, APTAMER, IMMUNE SYSTEM-DNA COMPLEX | |
Experiment | X-ray diffraction | |
Number of Models | 1 |
Database | ID code | Status | Coordinate files | ||
Header | Asymmetric unit | Biological unit | |||
PDB | 4ZBN | released | available | available | Quaternary Structure Server |
Unit | Type | Name | Chain ID | Residues | Atoms | Hetatoms |
---|---|---|---|---|---|---|
1 | Other macromolecule | DNA (28-MER) | D | 28 | 399 | 261 |
2 | Other macromolecule | DNA (28-MER) | E | 28 | 399 | 261 |
3 | Protein | BETA-NERVE GROWTH FACTOR | A | 97 | 749 | 0 |
4 | Protein | BETA-NERVE GROWTH FACTOR | B | 99 | 757 | 0 |
5 | Ligand | DNA (28-MER) | D | 1 | 0 | 15 |
6 | Water | 21 | 0 | 21 | ||
total | 274 | 2304 | 558 |
Unit 3 | GLU11 PHE12 SER13 VAL14 CYS15 ASP16 SER17 VAL18 SER19 VAL20 TRP21 VAL22 GLY23 ASP24 LYS25 THR26 THR27 ALA28 THR29 ASP30 ILE31 LYS32 GLY33 LYS34 GLU35 VAL36 MET37 VAL38 LEU39 GLY40 GLU41 VAL42 ASN43 ILE44 SER47 VAL48 PHE49 LYS50 GLN51 TYR52 PHE53 PHE54 GLU55 THR56 LYS57 CYS58 ARG59 ASP60 SER66 GLY67 CYS68 ARG69 GLY70 ILE71 ASP72 SER73 LYS74 HIS75 TRP76 ASN77 SER78 TYR79 CYS80 THR81 THR82 THR83 HIS84 THR85 PHE86 VAL87 LYS88 ALA89 LEU90 THR91 MET92 ASP93 GLY94 LYS95 GLN96 ALA97 ALA98 TRP99 ARG100 PHE101 ILE102 ARG103 ILE104 ASP105 THR106 ALA107 CYS108 VAL109 CYS110 VAL111 LEU112 SER113 ARG114 |
Unit 4 | HIS4 PRO5 ILE6 PHE7 HIS8 ARG9 GLY10 GLU11 PHE12 SER13 VAL14 CYS15 ASP16 SER17 VAL18 SER19 VAL20 TRP21 VAL22 GLY23 ASP24 LYS25 THR26 THR27 ALA28 THR29 ASP30 ILE31 LYS32 GLY33 LYS34 GLU35 VAL36 MET37 VAL38 LEU39 GLY40 GLU41 VAL42 ASN43 SER47 VAL48 PHE49 LYS50 GLN51 TYR52 PHE53 PHE54 GLU55 THR56 LYS57 CYS58 ARG59 ASP60 SER66 GLY67 CYS68 ARG69 GLY70 ILE71 ASP72 SER73 LYS74 HIS75 TRP76 ASN77 SER78 TYR79 CYS80 THR81 THR82 THR83 HIS84 THR85 PHE86 VAL87 LYS88 ALA89 LEU90 THR91 MET92 ALA97 ALA98 TRP99 ARG100 PHE101 ILE102 ARG103 ILE104 ASP105 THR106 ALA107 CYS108 VAL109 CYS110 VAL111 LEU112 SER113 ARG114 |
Unit 1 | DC1 DA2 DUZ3 DG4 DA5 DG6 DG7 DA8 DC9 DUZ10 DUZ11 DG12 DG13 DG14 DG15 DUZ16 DUZ17 DUZ18 DA19 DG20 DC21 DC22 DG23 DUZ24 DUZ25 DG26 DUZ27 DG28 |
Unit 2 | DC1 DA2 DUZ3 DG4 DA5 DG6 DG7 DA8 DC9 DUZ10 DUZ11 DG12 DG13 DG14 DG15 DUZ16 DUZ17 DUZ18 DA19 DG20 DC21 DC22 DG23 DUZ24 DUZ25 DG26 DUZ27 DG28 |
Unit 5 | EPE101 |
Perl script: | PDBscan.pl (15 Sep 2016) |
Author: | Peter Slickers (slickers@leibniz-fli.de), IMB Jena, Germany |