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Sequence, Chains, Asymmetric and Biological Units

Title STRUCTURE OF THE ENZYME-PRODUCT COMPLEX RESULTING FROM TDG A GU MISMATCH IN THE PRESENCE OF EXCESS BASE
Keywords PROTEIN-DNA COMPLEX, DNA BINDING PROTEIN-DNA COMPLEX
Experiment X-ray diffraction
Number of Models  1


   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  

PDB   4Z47     released     available     available     Quaternary Structure Server  


Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   G/T MISMATCH-SPECIFIC THYMINE DNA GLYCOSYLASE  A 224 2106 12
2  Other macromolecule   DNA  C 28 574 0
3  Protein   DNA  D 224 2106 12
4  Ligand   G/T MISMATCH-SPECIFIC THYMINE DNA GLYCOSYLASE  A 4 0 16
5 Water     273 0 273
total       753 4786 313

Proteins
Unit 1 DA1 DG2 DC3 DT4 DG5 DT6 DC7 DC8 DA9 DT10 DC11 DG12 DC13 DT14 DC15 DA16 ORP17 DG18 DT19 DA20 DC21 DA22 DG23 DA24 DG25 DC26 DT27 DG28 PHE111 ASN112 GLY113 VAL114 SER115 GLU116 ALA117 GLU118 LEU119 LEU120 THR121 LYS122 THR123 LEU124 PRO125 ASP126 ILE127 LEU128 THR129 PHE130 ASN131 LEU132 ASP133 ILE134 VAL135 ILE136 ILE137 GLY138 ILE139 ASN140 PRO141 GLY142 LEU143 MET144 ALA145 ALA146 TYR147 LYS148 GLY149 HIS150 HIS151 TYR152 PRO153 GLY154 PRO155 GLY156 ASN157 HIS158 PHE159 TRP160 LYS161 CYS162 LEU163 PHE164 MET165 SER166 GLY167 LEU168 SER169 GLU170 VAL171 GLN172 LEU173 ASN174 HIS175 MET176 ASP177 ASP178 HIS179 THR180 LEU181 PRO182 GLY183 LYS184 TYR185 GLY186 ILE187 GLY188 PHE189 THR190 ASN191 MET192 VAL193 GLU194 ARG195 THR196 THR197 PRO198 GLY199 SER200 LYS201 ASP202 LEU203 SER204 SER205 LYS206 GLU207 PHE208 ARG209 GLU210 GLY211 GLY212 ARG213 ILE214 LEU215 VAL216 GLN217 LYS218 LEU219 GLN220 LYS221 TYR222 GLN223 PRO224 ARG225 ILE226 ALA227 VAL228 PHE229 ASN230 GLY231 LYS232 CYS233 ILE234 TYR235 GLU236 ILE237 PHE238 SER239 LYS240 GLU241 VAL242 PHE243 GLY244 VAL245 LYS246 VAL247 LYS248 ASN249 LEU250 GLU251 PHE252 GLY253 LEU254 GLN255 PRO256 HIS257 LYS258 ILE259 PRO260 ASP261 THR262 GLU263 THR264 LEU265 CYS266 TYR267 VAL268 MET269 PRO270 SER271 SER272 SER273 ALA274 ARG275 CYS276 ALA277 GLN278 PHE279 PRO280 ARG281 ALA282 GLN283 ASP284 LYS285 VAL286 HIS287 TYR288 TYR289 ILE290 LYS291 LEU292 LYS293 ASP294 LEU295 ARG296 ASP297 GLN298 LEU299 LYS300 GLY301 ILE302 GLU303 ARG304 ASN305 MET306
Unit 3 DA1 DG2 DC3 DT4 DG5 DT6 DC7 DC8 DA9 DT10 DC11 DG12 DC13 DT14 DC15 DA16 ORP17 DG18 DT19 DA20 DC21 DA22 DG23 DA24 DG25 DC26 DT27 DG28 PHE111 ASN112 GLY113 VAL114 SER115 GLU116 ALA117 GLU118 LEU119 LEU120 THR121 LYS122 THR123 LEU124 PRO125 ASP126 ILE127 LEU128 THR129 PHE130 ASN131 LEU132 ASP133 ILE134 VAL135 ILE136 ILE137 GLY138 ILE139 ASN140 PRO141 GLY142 LEU143 MET144 ALA145 ALA146 TYR147 LYS148 GLY149 HIS150 HIS151 TYR152 PRO153 GLY154 PRO155 GLY156 ASN157 HIS158 PHE159 TRP160 LYS161 CYS162 LEU163 PHE164 MET165 SER166 GLY167 LEU168 SER169 GLU170 VAL171 GLN172 LEU173 ASN174 HIS175 MET176 ASP177 ASP178 HIS179 THR180 LEU181 PRO182 GLY183 LYS184 TYR185 GLY186 ILE187 GLY188 PHE189 THR190 ASN191 MET192 VAL193 GLU194 ARG195 THR196 THR197 PRO198 GLY199 SER200 LYS201 ASP202 LEU203 SER204 SER205 LYS206 GLU207 PHE208 ARG209 GLU210 GLY211 GLY212 ARG213 ILE214 LEU215 VAL216 GLN217 LYS218 LEU219 GLN220 LYS221 TYR222 GLN223 PRO224 ARG225 ILE226 ALA227 VAL228 PHE229 ASN230 GLY231 LYS232 CYS233 ILE234 TYR235 GLU236 ILE237 PHE238 SER239 LYS240 GLU241 VAL242 PHE243 GLY244 VAL245 LYS246 VAL247 LYS248 ASN249 LEU250 GLU251 PHE252 GLY253 LEU254 GLN255 PRO256 HIS257 LYS258 ILE259 PRO260 ASP261 THR262 GLU263 THR264 LEU265 CYS266 TYR267 VAL268 MET269 PRO270 SER271 SER272 SER273 ALA274 ARG275 CYS276 ALA277 GLN278 PHE279 PRO280 ARG281 ALA282 GLN283 ASP284 LYS285 VAL286 HIS287 TYR288 TYR289 ILE290 LYS291 LEU292 LYS293 ASP294 LEU295 ARG296 ASP297 GLN298 LEU299 LYS300 GLY301 ILE302 GLU303 ARG304 ASN305 MET306

Other macromolecules
Unit 2 DC1 DA2 DG3 DC4 DT5 DC6 DT7 DG8 DT9 DA10 DC11 DG12 DT13 DG14 DA15 DG16 DC17 DG18 DA19 DT20 DG21 DG22 DA23 DC24 DA25 DG26 DC27 DT28

Ligands
Unit 4 EDO401 EDO402 EDO403 ACY404

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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany