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Sequence, Chains, Asymmetric and Biological Units

Title THE STRUCTURE OF HEMAGGLUTININ FROM A H6N1 INFLUENZA VIRUS (A/CHICKEN/TAIWAN/A2837/2013) IN COMPLEX WITH AVIAN RECEPTO 3'SLNLN
Keywords HEMAGGLUTININ, IMMUNE SYSTEM
Experiment X-ray diffraction
Number of Models  1

   Database       ID code    StatusCoordinate files
        Header     Asymmetric unit     Biological unit  
PDB   4YY7     released     available     available     Quaternary Structure Server  
Asymmetric unit from PDB
 Unit     Type     Name   Chain ID   Residues   Atoms   Hetatoms 
1  Protein   HA1  A 325 2563 0
2  Protein   HA2  B 164 1321 0
3  Protein   HA1  C 325 2563 0
4  Protein   HA2  D 164 1321 0
5  Ligand    E 2 0 28
6  Ligand    F 3 0 46
7  Ligand    G 2 0 28
8  Ligand    H 3 0 46
9  Ligand   HA1  A 1 0 14
10  Ligand   HA2  B 1 0 14
11  Ligand   HA1  C 1 0 14
12  Ligand   HA2  D 1 0 14
total       992 7768 204
Proteins
Unit 1 ASP1 LYS2 ILE3 CYS4 ILE5 GLY6 TYR7 HIS8 ALA9 ASN10 ASN11 SER12 THR13 THR14 GLN15 VAL16 ASP17 THR18 LEU19 LEU20 GLU21 LYS22 ASN23 VAL24 THR25 VAL26 THR27 HIS28 SER29 VAL30 GLU31 LEU32 LEU33 GLU34 ASN35 GLN36 LYS37 GLU38 LYS39 ARG40 PHE41 CYS42 LYS43 ILE44 MET45 ASN46 LYS47 ALA48 PRO49 LEU50 ASP51 LEU52 LYS53 ASP54 CYS55 THR56 ILE57 GLU58 GLY59 TRP60 ILE61 LEU62 GLY63 ASN64 PRO65 LYS66 CYS67 ASP68 LEU69 LEU70 LEU71 GLY72 ASP73 GLN74 SER75 TRP76 SER77 TYR78 ILE79 VAL80 GLU81 ARG82 PRO83 ASN84 ALA85 GLN86 ASN87 GLY88 ILE89 CYS90 TYR91 PRO92 GLY93 VAL94 LEU95 ASN96 GLU97 LEU98 GLU99 GLU100 LEU101 LYS102 ALA103 PHE104 ILE105 GLY106 SER107 GLY108 GLU109 ARG110 VAL111 GLU112 ARG113 PHE114 GLU115 MET116 PHE117 PRO118 LYS119 SER120 THR121 TRP122 ALA123 GLY124 VAL125 ASP126 THR127 SER128 ARG129 GLY130 VAL131 THR132 ASN133 ALA134 CYS135 PRO136 SER137 TYR138 THR139 LEU140 ASP141 SER142 SER143 PHE144 TYR145 ARG146 ASN147 LEU148 VAL149 TRP150 LEU151 VAL152 LYS153 THR154 ASP155 SER156 ALA157 THR158 TYR159 PRO160 VAL161 ILE162 LYS163 GLY164 THR165 TYR166 ASN167 ASN168 THR169 GLY170 THR171 GLN172 PRO173 ILE174 LEU175 TYR176 PHE177 TRP178 GLY179 VAL180 HIS181 HIS182 PRO183 PRO184 ASP185 THR186 THR187 VAL188 GLN189 ASP190 ASN191 LEU192 TYR193 GLY194 SER195 GLY196 ASP197 LYS198 TYR199 VAL200 ARG201 MET202 GLY203 THR204 GLU205 SER206 MET207 ASN208 PHE209 ALA210 LYS211 SER212 PRO213 GLU214 ILE215 ALA216 ALA217 ARG218 PRO219 ALA220 VAL221 ASN222 GLY223 GLN224 ARG225 SER226 ARG227 ILE228 ASP229 TYR230 TYR231 TRP232 SER233 VAL234 LEU235 ARG236 PRO237 GLY238 GLU239 THR240 LEU241 ASN242 VAL243 GLU244 SER245 ASN246 GLY247 ASN248 LEU249 ILE250 ALA251 PRO252 TRP253 TYR254 ALA255 TYR256 LYS257 PHE258 VAL259 SER260 THR261 ASN262 LYS263 LYS264 GLY265 ALA266 VAL267 PHE268 LYS269 SER270 ASP271 LEU272 PRO273 ILE274 GLU275 ASN276 CYS277 ASP278 ALA279 THR280 CYS281 GLN282 THR283 ILE284 ALA285 GLY286 VAL287 LEU288 LYS289 THR290 ASN291 LYS292 THR293 PHE294 GLN295 ASN296 VAL297 SER298 PRO299 LEU300 TRP301 ILE302 GLY303 GLU304 CYS305 PRO306 LYS307 TYR308 VAL309 LYS310 SER311 GLU312 SER313 LEU314 ARG315 LEU316 ALA317 THR318 GLY319 LEU320 ARG321 ASN322 VAL323 PRO324 GLN325
Unit 2 GLY330 ILE331 PHE332 GLY333 ALA334 ILE335 ALA336 GLY337 PHE338 ILE339 GLU340 GLY341 GLY342 TRP343 THR344 GLY345 MET346 ILE347 ASP348 GLY349 TRP350 TYR351 GLY352 TYR353 HIS354 HIS355 GLU356 ASN357 SER358 GLN359 GLY360 SER361 GLY362 TYR363 ALA364 ALA365 ASP366 ARG367 GLU368 SER369 THR370 GLN371 LYS372 ALA373 ILE374 ASP375 GLY376 ILE377 THR378 ASN379 LYS380 VAL381 ASN382 SER383 ILE384 ILE385 ASN386 LYS387 MET388 ASN389 THR390 GLN391 PHE392 GLU393 ALA394 VAL395 ASP396 HIS397 GLU398 PHE399 SER400 ASN401 LEU402 GLU403 ARG404 ARG405 ILE406 GLY407 ASN408 LEU409 ASN410 LYS411 ARG412 MET413 GLU414 ASP415 GLY416 PHE417 LEU418 ASP419 VAL420 TRP421 THR422 TYR423 ASN424 ALA425 GLU426 LEU427 LEU428 VAL429 LEU430 LEU431 GLU432 ASN433 GLU434 ARG435 THR436 LEU437 ASP438 LEU439 HIS440 ASP441 ALA442 ASN443 VAL444 LYS445 ASN446 LEU447 TYR448 GLU449 LYS450 VAL451 LYS452 SER453 GLN454 LEU455 ARG456 ASP457 ASN458 ALA459 ASN460 ASP461 LEU462 GLY463 ASN464 GLY465 CYS466 PHE467 GLU468 PHE469 TRP470 HIS471 LYS472 CYS473 ASP474 ASN475 GLU476 CYS477 MET478 GLU479 SER480 VAL481 LYS482 ASN483 GLY484 THR485 TYR486 ASP487 TYR488 PRO489 LYS490 TYR491 GLN492 LYS493
Unit 3 ASP1 LYS2 ILE3 CYS4 ILE5 GLY6 TYR7 HIS8 ALA9 ASN10 ASN11 SER12 THR13 THR14 GLN15 VAL16 ASP17 THR18 LEU19 LEU20 GLU21 LYS22 ASN23 VAL24 THR25 VAL26 THR27 HIS28 SER29 VAL30 GLU31 LEU32 LEU33 GLU34 ASN35 GLN36 LYS37 GLU38 LYS39 ARG40 PHE41 CYS42 LYS43 ILE44 MET45 ASN46 LYS47 ALA48 PRO49 LEU50 ASP51 LEU52 LYS53 ASP54 CYS55 THR56 ILE57 GLU58 GLY59 TRP60 ILE61 LEU62 GLY63 ASN64 PRO65 LYS66 CYS67 ASP68 LEU69 LEU70 LEU71 GLY72 ASP73 GLN74 SER75 TRP76 SER77 TYR78 ILE79 VAL80 GLU81 ARG82 PRO83 ASN84 ALA85 GLN86 ASN87 GLY88 ILE89 CYS90 TYR91 PRO92 GLY93 VAL94 LEU95 ASN96 GLU97 LEU98 GLU99 GLU100 LEU101 LYS102 ALA103 PHE104 ILE105 GLY106 SER107 GLY108 GLU109 ARG110 VAL111 GLU112 ARG113 PHE114 GLU115 MET116 PHE117 PRO118 LYS119 SER120 THR121 TRP122 ALA123 GLY124 VAL125 ASP126 THR127 SER128 ARG129 GLY130 VAL131 THR132 ASN133 ALA134 CYS135 PRO136 SER137 TYR138 THR139 LEU140 ASP141 SER142 SER143 PHE144 TYR145 ARG146 ASN147 LEU148 VAL149 TRP150 LEU151 VAL152 LYS153 THR154 ASP155 SER156 ALA157 THR158 TYR159 PRO160 VAL161 ILE162 LYS163 GLY164 THR165 TYR166 ASN167 ASN168 THR169 GLY170 THR171 GLN172 PRO173 ILE174 LEU175 TYR176 PHE177 TRP178 GLY179 VAL180 HIS181 HIS182 PRO183 PRO184 ASP185 THR186 THR187 VAL188 GLN189 ASP190 ASN191 LEU192 TYR193 GLY194 SER195 GLY196 ASP197 LYS198 TYR199 VAL200 ARG201 MET202 GLY203 THR204 GLU205 SER206 MET207 ASN208 PHE209 ALA210 LYS211 SER212 PRO213 GLU214 ILE215 ALA216 ALA217 ARG218 PRO219 ALA220 VAL221 ASN222 GLY223 GLN224 ARG225 SER226 ARG227 ILE228 ASP229 TYR230 TYR231 TRP232 SER233 VAL234 LEU235 ARG236 PRO237 GLY238 GLU239 THR240 LEU241 ASN242 VAL243 GLU244 SER245 ASN246 GLY247 ASN248 LEU249 ILE250 ALA251 PRO252 TRP253 TYR254 ALA255 TYR256 LYS257 PHE258 VAL259 SER260 THR261 ASN262 LYS263 LYS264 GLY265 ALA266 VAL267 PHE268 LYS269 SER270 ASP271 LEU272 PRO273 ILE274 GLU275 ASN276 CYS277 ASP278 ALA279 THR280 CYS281 GLN282 THR283 ILE284 ALA285 GLY286 VAL287 LEU288 LYS289 THR290 ASN291 LYS292 THR293 PHE294 GLN295 ASN296 VAL297 SER298 PRO299 LEU300 TRP301 ILE302 GLY303 GLU304 CYS305 PRO306 LYS307 TYR308 VAL309 LYS310 SER311 GLU312 SER313 LEU314 ARG315 LEU316 ALA317 THR318 GLY319 LEU320 ARG321 ASN322 VAL323 PRO324 GLN325
Unit 4 GLY330 ILE331 PHE332 GLY333 ALA334 ILE335 ALA336 GLY337 PHE338 ILE339 GLU340 GLY341 GLY342 TRP343 THR344 GLY345 MET346 ILE347 ASP348 GLY349 TRP350 TYR351 GLY352 TYR353 HIS354 HIS355 GLU356 ASN357 SER358 GLN359 GLY360 SER361 GLY362 TYR363 ALA364 ALA365 ASP366 ARG367 GLU368 SER369 THR370 GLN371 LYS372 ALA373 ILE374 ASP375 GLY376 ILE377 THR378 ASN379 LYS380 VAL381 ASN382 SER383 ILE384 ILE385 ASN386 LYS387 MET388 ASN389 THR390 GLN391 PHE392 GLU393 ALA394 VAL395 ASP396 HIS397 GLU398 PHE399 SER400 ASN401 LEU402 GLU403 ARG404 ARG405 ILE406 GLY407 ASN408 LEU409 ASN410 LYS411 ARG412 MET413 GLU414 ASP415 GLY416 PHE417 LEU418 ASP419 VAL420 TRP421 THR422 TYR423 ASN424 ALA425 GLU426 LEU427 LEU428 VAL429 LEU430 LEU431 GLU432 ASN433 GLU434 ARG435 THR436 LEU437 ASP438 LEU439 HIS440 ASP441 ALA442 ASN443 VAL444 LYS445 ASN446 LEU447 TYR448 GLU449 LYS450 VAL451 LYS452 SER453 GLN454 LEU455 ARG456 ASP457 ASN458 ALA459 ASN460 ASP461 LEU462 GLY463 ASN464 GLY465 CYS466 PHE467 GLU468 PHE469 TRP470 HIS471 LYS472 CYS473 ASP474 ASN475 GLU476 CYS477 MET478 GLU479 SER480 VAL481 LYS482 ASN483 GLY484 THR485 TYR486 ASP487 TYR488 PRO489 LYS490 TYR491 GLN492 LYS493
Ligands
Unit 5 NAG1 NAG2
Unit 6 NAG1 GAL2 SIA3
Unit 7 NAG1 NAG2
Unit 8 NAG1 GAL2 SIA3
Unit 9 NAG401
Unit 10 NAG501
Unit 11 NAG601
Unit 12 NAG501
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Perl script:    PDBscan.pl  (15 Sep 2016)
Author:    Peter Slickers  (slickers@leibniz-fli.de),  IMB Jena,  Germany