4YVI - Sequence, Chains, Asymmetric and Biological Units

• Title: CRYSTAL STRUCTURE OF H. INFLUENZAE TRMD IN COMPLEX WITH SINE TRNA
• Keywords: MTASE, SPOUT, TRNA, TRANSFERASE-RNA COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4YVI	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	TRNA (GUANINE-N(1)-)-METHYLTRANSFERASE	A	239	1891	0
2	Protein	TRNA (GUANINE-N(1)-)-METHYLTRANSFERASE	B	249	1957	0
3	RNA		C	71	1519	0
4	Ligand	TRNA (GUANINE-N(1)-)-METHYLTRANSFERASE	A	1	0	27
5	Ligand	TRNA (GUANINE-N(1)-)-METHYLTRANSFERASE	B	1	0	27
total				561	5367	54

Proteins

Unit 1

HIS 0 MET 1 TRP 2 ILE 3 GLY 4 VAL 5 ILE 6 SER 7 LEU 8 PHE 9 PRO 10 GLU 11 MET 12 PHE 13 LYS 14 ALA 15 ILE 16 THR 17 GLU 18 PHE 19 GLY 20 VAL 21 THR 22 GLY 23 ARG 24 ALA 25 VAL 26 LYS 27 HIS 28 ASN 29 LEU 30 LEU 31 LYS 32 VAL 33 GLU 34 CYS 35 TRP 36 ASN 37 PRO 38 ARG 39 ASP 40 PHE 41 THR 42 PHE 43 ASP 44 LYS 45 HIS 46 LYS 47 THR 48 VAL 49 ASP 50 ASP 51 ARG 52 PRO 53 TYR 54 GLY 55 GLY 56 GLY 57 PRO 58 GLY 59 MET 60 LEU 61 MET 62 MET 63 VAL 64 GLN 65 PRO 66 LEU 67 ARG 68 ASP 69 ALA 70 ILE 71 HIS 72 THR 73 ALA 74 LYS 75 ALA 76 ALA 77 ALA 78 GLY 79 GLU 80 GLY 81 ALA 82 LYS 83 VAL 84 ILE 85 TYR 86 LEU 87 SER 88 PRO 89 GLN 90 GLY 91 ARG 92 LYS 93 LEU 94 ASP 95 GLN 96 GLY 97 GLY 98 VAL 99 THR 100 GLU 101 LEU 102 ALA 103 GLN 104 ASN 105 GLN 106 LYS 107 LEU 108 ILE 109 LEU 110 VAL 111 CYS 112 GLY 113 ARG 114 TYR 115 GLU 116 GLY 117 ILE 118 ASP 119 GLU 120 ARG 121 LEU 122 ILE 123 GLN 124 THR 125 GLU 126 ILE 127 ASP 128 GLU 129 GLU 130 TRP 131 SER 132 ILE 133 GLY 134 ASP 135 TYR 136 VAL 137 LEU 138 THR 139 GLY 140 GLY 141 GLU 142 LEU 143 PRO 144 ALA 145 MET 146 THR 147 LEU 148 ILE 149 ASP 150 ALA 151 VAL 152 ALA 153 ARG 154 PHE 155 ILE 156 PRO 157 GLY 158 VAL 159 LEU 160 ASP 169 SER 170 PHE 171 ALA 172 ASP 173 GLY 174 LEU 175 LEU 176 ASP 177 CYS 178 PRO 179 HIS 180 TYR 181 THR 182 ARG 183 PRO 184 GLU 185 VAL 186 LEU 187 GLU 188 GLY 189 LEU 190 THR 191 VAL 192 PRO 193 PRO 194 VAL 195 LEU 196 MET 197 SER 198 GLY 199 HIS 200 HIS 201 GLU 202 GLU 203 ILE 204 ARG 205 LYS 206 TRP 207 ARG 208 LEU 209 LYS 210 GLN 211 SER 212 LEU 213 GLN 214 ARG 215 THR 216 TRP 217 LEU 218 ARG 219 ARG 220 PRO 221 GLU 222 LEU 223 LEU 224 GLU 225 GLY 226 LEU 227 ALA 228 LEU 229 THR 230 ASP 231 GLU 232 GLN 233 ARG 234 LYS 235 LEU 236 LEU 237 LYS 238 GLU 239 ALA 240 GLN 241 ALA 242 GLU 243 HIS 244 ASN 245 SER 246

Unit 2

GLY -2 SER -1 HIS 0 MET 1 TRP 2 ILE 3 GLY 4 VAL 5 ILE 6 SER 7 LEU 8 PHE 9 PRO 10 GLU 11 MET 12 PHE 13 LYS 14 ALA 15 ILE 16 THR 17 GLU 18 PHE 19 GLY 20 VAL 21 THR 22 GLY 23 ARG 24 ALA 25 VAL 26 LYS 27 HIS 28 ASN 29 LEU 30 LEU 31 LYS 32 VAL 33 GLU 34 CYS 35 TRP 36 ASN 37 PRO 38 ARG 39 ASP 40 PHE 41 THR 42 PHE 43 ASP 44 LYS 45 HIS 46 LYS 47 THR 48 VAL 49 ASP 50 ASP 51 ARG 52 PRO 53 TYR 54 GLY 55 GLY 56 GLY 57 PRO 58 GLY 59 MET 60 LEU 61 MET 62 MET 63 VAL 64 GLN 65 PRO 66 LEU 67 ARG 68 ASP 69 ALA 70 ILE 71 HIS 72 THR 73 ALA 74 LYS 75 ALA 76 ALA 77 ALA 78 GLY 79 GLU 80 GLY 81 ALA 82 LYS 83 VAL 84 ILE 85 TYR 86 LEU 87 SER 88 PRO 89 GLN 90 GLY 91 ARG 92 LYS 93 LEU 94 ASP 95 GLN 96 GLY 97 GLY 98 VAL 99 THR 100 GLU 101 LEU 102 ALA 103 GLN 104 ASN 105 GLN 106 LYS 107 LEU 108 ILE 109 LEU 110 VAL 111 CYS 112 GLY 113 ARG 114 TYR 115 GLU 116 GLY 117 ILE 118 ASP 119 GLU 120 ARG 121 LEU 122 ILE 123 GLN 124 THR 125 GLU 126 ILE 127 ASP 128 GLU 129 GLU 130 TRP 131 SER 132 ILE 133 GLY 134 ASP 135 TYR 136 VAL 137 LEU 138 THR 139 GLY 140 GLY 141 GLU 142 LEU 143 PRO 144 ALA 145 MET 146 THR 147 LEU 148 ILE 149 ASP 150 ALA 151 VAL 152 ALA 153 ARG 154 PHE 155 ILE 156 PRO 157 GLY 158 VAL 159 LEU 160 GLY 161 LYS 162 GLN 163 ALA 164 SER 165 ALA 166 GLU 167 GLU 168 ASP 169 SER 170 PHE 171 ALA 172 ASP 173 GLY 174 LEU 175 LEU 176 ASP 177 CYS 178 PRO 179 HIS 180 TYR 181 THR 182 ARG 183 PRO 184 GLU 185 VAL 186 LEU 187 GLU 188 GLY 189 LEU 190 THR 191 VAL 192 PRO 193 PRO 194 VAL 195 LEU 196 MET 197 SER 198 GLY 199 HIS 200 HIS 201 GLU 202 GLU 203 ILE 204 ARG 205 LYS 206 TRP 207 ARG 208 LEU 209 LYS 210 GLN 211 SER 212 LEU 213 GLN 214 ARG 215 THR 216 TRP 217 LEU 218 ARG 219 ARG 220 PRO 221 GLU 222 LEU 223 LEU 224 GLU 225 GLY 226 LEU 227 ALA 228 LEU 229 THR 230 ASP 231 GLU 232 GLN 233 ARG 234 LYS 235 LEU 236 LEU 237 LYS 238 GLU 239 ALA 240 GLN 241 ALA 242 GLU 243 HIS 244 ASN 245 SER 246

Nucleic acids

Unit 3

U 1 G 2 G 3 G 4 A 5 G 6 G 7 U 8 C 9 G 10 U 11 C 12 U 13 A 14 A 15 C 16 G 18 G 19 U 20 A 21 G 22 G 23 A 24 C 25 G 26 G 27 C 28 G 29 G 30 A 31 C 32 U 33 C 34 U 35 G 36 G 37 A 38 U 39 C 40 C 41 G 42 C 43 U 44 G 45 G 46 U 48 G 49 G 50 A 51 G 52 G 53 U 54 U 55 C 56 G 57 A 58 G 59 U 60 C 61 C 62 U 63 C 64 C 65 C 66 C 67 U 68 C 69 C 70 C 71 A 72 G 73

Ligands

Unit 4	SFG 301
Unit 5	SFG 301