4YV9 - Sequence, Chains, Asymmetric and Biological Units

• Title: X-RAY CRYSTAL STRUCTURE OF STREPTOCOCCUS DYSGALACTIAE SHP PH RECEPTOR RGG2
• Keywords: DNA BINDING, PHEROMONE BINDING, REPEAT DOMAIN, QUORUM SENSIN BINDING PROTEIN-INHIBITOR COMPLEX
• Experiment: X-ray diffraction
• Number of Models: 1

Database	ID code	Status	Coordinate files
			Header	Asymmetric unit	Biological unit
PDB	4YV9	released	available	available	Quaternary Structure Server

Asymmetric unit from PDB

Unit	Type	Name	Chain ID	Residues	Atoms	Hetatoms
1	Protein	TRANSCRIPTIONAL REGULATOR	A	261	2154	24
2	Protein	TRANSCRIPTIONAL REGULATOR	B	270	2228	24
3	Protein	TRANSCRIPTIONAL REGULATOR	C	268	2215	24
4	Protein	TRANSCRIPTIONAL REGULATOR	D	264	2184	24
5	Protein	CYCLOSPORIN A	E	11	12	73
6	Protein	CYCLOSPORIN A	F	11	12	73
7	Protein	CYCLOSPORIN A	G	11	12	73
8	Protein	CYCLOSPORIN A	H	11	12	73
9	Ligand	TRANSCRIPTIONAL REGULATOR	A	4	0	20
10	Ligand	TRANSCRIPTIONAL REGULATOR	B	2	0	10
11	Ligand	TRANSCRIPTIONAL REGULATOR	C	3	0	15
12	Ligand	TRANSCRIPTIONAL REGULATOR	D	4	0	20
13	Water			589	0	589
total				1709	8829	1042

Proteins

Unit 1	LEU 5 GLY 6 LYS 7 THR 8 LEU 9 ARG 10 ARG 11 LEU 12 ARG 13 GLN 14 GLY 15 LYS 16 GLN 17 VAL 18 SER 19 ILE 20 SER 21 SER 22 LEU 23 LEU 28 SER 29 LYS 30 SER 31 GLN 32 ILE 33 SER 34 ARG 35 PHE 36 GLU 37 ARG 38 GLY 39 GLU 40 SER 41 GLU 42 ILE 43 SER 44 CYS 45 SER 46 ARG 47 LEU 48 LEU 49 ASN 50 LEU 51 LEU 52 ASP 53 LYS 54 LEU 55 ASN 56 ILE 57 THR 58 ILE 59 ASP 60 GLU 61 PHE 62 VAL 63 SER 64 THR 65 THR 71 HIS 72 PHE 73 PHE 74 THR 75 LEU 76 LEU 77 SER 78 ARG 79 VAL 80 ARG 81 LYS 82 TYR 83 TYR 84 ALA 85 GLU 86 LYS 87 ASN 88 VAL 89 ALA 90 LYS 91 LEU 92 LEU 93 LYS 94 LEU 95 LEU 96 GLU 97 ASP 98 TYR 99 ALA 100 HIS 101 LYS 102 ASP 103 TYR 104 GLU 105 SER 106 THR 107 MSE 108 ILE 109 LYS 110 ALA 111 ILE 112 LEU 113 SER 114 SER 115 ILE 116 GLU 117 PRO 118 THR 119 VAL 120 GLU 121 PRO 122 SER 123 GLU 124 GLU 125 GLU 126 VAL 127 THR 128 ARG 129 LEU 130 THR 131 ASP 132 TYR 133 LEU 134 PHE 135 SER 136 VAL 137 GLU 138 GLN 139 TRP 140 GLY 141 TYR 142 TYR 143 GLU 144 ILE 145 ILE 146 LEU 147 LEU 148 GLY 149 ASN 150 CYS 151 SER 152 ARG 153 PHE 154 ILE 155 ASN 156 TYR 157 ASN 158 THR 159 LEU 160 PHE 161 LEU 162 LEU 163 THR 164 LYS 165 GLU 166 MSE 167 VAL 168 THR 169 SER 170 PHE 171 ALA 172 TYR 173 SER 174 GLU 175 GLN 176 ASN 177 LYS 178 THR 179 ASN 180 LYS 181 THR 182 LEU 183 VAL 184 THR 185 GLN 186 LEU 187 SER 188 ILE 189 ASN 190 CYS 191 LEU 192 ILE 193 ILE 194 SER 195 ILE 196 ASP 197 TYR 198 SER 199 TYR 200 PHE 201 ASP 202 HIS 203 SER 204 HIS 205 TYR 206 LEU 207 ILE 208 GLU 209 LYS 210 ILE 211 GLU 212 PHE 213 LEU 214 LEU 215 ARG 216 ASP 217 GLU 218 LEU 219 ASN 220 PHE 221 TYR 222 GLU 223 LYS 224 THR 225 VAL 226 PHE 227 LEU 228 TYR 229 VAL 230 HIS 231 GLY 232 TYR 233 TYR 234 LYS 235 LEU 236 LYS 237 GLN 238 GLY 239 GLN 240 VAL 241 SER 242 GLY 243 LYS 244 ASP 245 ASP 246 MSE 247 ARG 248 GLN 249 ALA 250 LEU 251 GLN 252 ILE 253 PHE 254 LYS 255 TYR 256 LEU 257 GLY 258 GLU 259 ASP 260 ALA 261 LEU 262 TYR 263 TYR 264 SER 265 TYR 266 LYS 267 GLU 268 HIS 269 TYR 270 ARG 271 LYS 272 GLU 273 VAL 274
Unit 2	LEU 5 GLY 6 LYS 7 THR 8 LEU 9 ARG 10 ARG 11 LEU 12 ARG 13 GLN 14 GLY 15 LYS 16 GLN 17 VAL 18 SER 19 ILE 20 SER 21 SER 22 LEU 23 ALA 24 ASP 25 GLU 26 HIS 27 LEU 28 SER 29 LYS 30 SER 31 GLN 32 ILE 33 SER 34 ARG 35 PHE 36 GLU 37 ARG 38 GLY 39 GLU 40 SER 41 GLU 42 ILE 43 SER 44 CYS 45 SER 46 ARG 47 LEU 48 LEU 49 ASN 50 LEU 51 LEU 52 ASP 53 LYS 54 LEU 55 ASN 56 ILE 57 THR 58 ILE 59 ASP 60 GLU 61 PHE 62 VAL 63 SER 64 THR 65 HIS 66 SER 67 LYS 68 THR 69 HIS 70 THR 71 HIS 72 PHE 73 PHE 74 THR 75 LEU 76 LEU 77 SER 78 ARG 79 VAL 80 ARG 81 LYS 82 TYR 83 TYR 84 ALA 85 GLU 86 LYS 87 ASN 88 VAL 89 ALA 90 LYS 91 LEU 92 LEU 93 LYS 94 LEU 95 LEU 96 GLU 97 ASP 98 TYR 99 ALA 100 HIS 101 LYS 102 ASP 103 TYR 104 GLU 105 SER 106 THR 107 MSE 108 ILE 109 LYS 110 ALA 111 ILE 112 LEU 113 SER 114 SER 115 ILE 116 GLU 117 PRO 118 THR 119 VAL 120 GLU 121 PRO 122 SER 123 GLU 124 GLU 125 GLU 126 VAL 127 THR 128 ARG 129 LEU 130 THR 131 ASP 132 TYR 133 LEU 134 PHE 135 SER 136 VAL 137 GLU 138 GLN 139 TRP 140 GLY 141 TYR 142 TYR 143 GLU 144 ILE 145 ILE 146 LEU 147 LEU 148 GLY 149 ASN 150 CYS 151 SER 152 ARG 153 PHE 154 ILE 155 ASN 156 TYR 157 ASN 158 THR 159 LEU 160 PHE 161 LEU 162 LEU 163 THR 164 LYS 165 GLU 166 MSE 167 VAL 168 THR 169 SER 170 PHE 171 ALA 172 TYR 173 SER 174 GLU 175 GLN 176 ASN 177 LYS 178 THR 179 ASN 180 LYS 181 THR 182 LEU 183 VAL 184 THR 185 GLN 186 LEU 187 SER 188 ILE 189 ASN 190 CYS 191 LEU 192 ILE 193 ILE 194 SER 195 ILE 196 ASP 197 TYR 198 SER 199 TYR 200 PHE 201 ASP 202 HIS 203 SER 204 HIS 205 TYR 206 LEU 207 ILE 208 GLU 209 LYS 210 ILE 211 GLU 212 PHE 213 LEU 214 LEU 215 ARG 216 ASP 217 GLU 218 LEU 219 ASN 220 PHE 221 TYR 222 GLU 223 LYS 224 THR 225 VAL 226 PHE 227 LEU 228 TYR 229 VAL 230 HIS 231 GLY 232 TYR 233 TYR 234 LYS 235 LEU 236 LYS 237 GLN 238 GLY 239 GLN 240 VAL 241 SER 242 GLY 243 LYS 244 ASP 245 ASP 246 MSE 247 ARG 248 GLN 249 ALA 250 LEU 251 GLN 252 ILE 253 PHE 254 LYS 255 TYR 256 LEU 257 GLY 258 GLU 259 ASP 260 ALA 261 LEU 262 TYR 263 TYR 264 SER 265 TYR 266 LYS 267 GLU 268 HIS 269 TYR 270 ARG 271 LYS 272 GLU 273 VAL 274
Unit 3	GLU 4 LEU 5 GLY 6 LYS 7 THR 8 LEU 9 ARG 10 ARG 11 LEU 12 ARG 13 GLN 14 GLY 15 LYS 16 GLN 17 VAL 18 SER 19 ILE 20 SER 21 SER 22 LEU 23 ALA 24 ASP 25 GLU 26 HIS 27 LEU 28 SER 29 LYS 30 SER 31 GLN 32 ILE 33 SER 34 ARG 35 PHE 36 GLU 37 ARG 38 GLY 39 GLU 40 SER 41 GLU 42 ILE 43 SER 44 CYS 45 SER 46 ARG 47 LEU 48 LEU 49 ASN 50 LEU 51 LEU 52 ASP 53 LYS 54 LEU 55 ASN 56 ILE 57 THR 58 ILE 59 ASP 60 GLU 61 PHE 62 VAL 63 SER 64 THR 65 HIS 66 HIS 70 THR 71 HIS 72 PHE 73 PHE 74 THR 75 LEU 76 LEU 77 SER 78 ARG 79 VAL 80 ARG 81 LYS 82 TYR 83 TYR 84 ALA 85 GLU 86 LYS 87 ASN 88 VAL 89 ALA 90 LYS 91 LEU 92 LEU 93 LYS 94 LEU 95 LEU 96 GLU 97 ASP 98 TYR 99 ALA 100 HIS 101 LYS 102 ASP 103 TYR 104 GLU 105 SER 106 THR 107 MSE 108 ILE 109 LYS 110 ALA 111 ILE 112 LEU 113 SER 114 SER 115 ILE 116 GLU 117 PRO 118 THR 119 VAL 120 GLU 121 PRO 122 SER 123 GLU 124 GLU 125 GLU 126 VAL 127 THR 128 ARG 129 LEU 130 THR 131 ASP 132 TYR 133 LEU 134 PHE 135 SER 136 VAL 137 GLU 138 GLN 139 TRP 140 GLY 141 TYR 142 TYR 143 GLU 144 ILE 145 ILE 146 LEU 147 LEU 148 GLY 149 ASN 150 CYS 151 SER 152 ARG 153 PHE 154 ILE 155 ASN 156 TYR 157 ASN 158 THR 159 LEU 160 PHE 161 LEU 162 LEU 163 THR 164 LYS 165 GLU 166 MSE 167 VAL 168 THR 169 SER 170 PHE 171 ALA 172 TYR 173 SER 174 GLU 175 GLN 176 ASN 177 LYS 178 THR 179 ASN 180 LYS 181 THR 182 LEU 183 VAL 184 THR 185 GLN 186 LEU 187 SER 188 ILE 189 ASN 190 CYS 191 LEU 192 ILE 193 ILE 194 SER 195 ILE 196 ASP 197 TYR 198 SER 199 TYR 200 PHE 201 ASP 202 HIS 203 SER 204 HIS 205 TYR 206 LEU 207 ILE 208 GLU 209 LYS 210 ILE 211 GLU 212 PHE 213 LEU 214 LEU 215 ARG 216 ASP 217 GLU 218 LEU 219 ASN 220 PHE 221 TYR 222 GLU 223 LYS 224 THR 225 VAL 226 PHE 227 LEU 228 TYR 229 VAL 230 HIS 231 GLY 232 TYR 233 TYR 234 LYS 235 LEU 236 LYS 237 GLN 238 GLY 239 GLN 240 VAL 241 SER 242 GLY 243 LYS 244 ASP 245 ASP 246 MSE 247 ARG 248 GLN 249 ALA 250 LEU 251 GLN 252 ILE 253 PHE 254 LYS 255 TYR 256 LEU 257 GLY 258 GLU 259 ASP 260 ALA 261 LEU 262 TYR 263 TYR 264 SER 265 TYR 266 LYS 267 GLU 268 HIS 269 TYR 270 ARG 271 LYS 272 GLU 273 VAL 274
Unit 4	GLU 4 LEU 5 GLY 6 LYS 7 THR 8 LEU 9 ARG 10 ARG 11 LEU 12 ARG 13 GLN 14 GLY 15 LYS 16 GLN 17 VAL 18 SER 19 ILE 20 SER 21 SER 22 LEU 23 ALA 24 ASP 25 GLU 26 HIS 27 LEU 28 SER 29 LYS 30 SER 31 GLN 32 ILE 33 SER 34 ARG 35 PHE 36 GLU 37 ARG 38 GLY 39 GLU 40 SER 41 GLU 42 ILE 43 SER 44 CYS 45 SER 46 ARG 47 LEU 48 LEU 49 ASN 50 LEU 51 LEU 52 ASP 53 LYS 54 LEU 55 ASN 56 ILE 57 THR 58 ILE 59 ASP 60 GLU 61 PHE 62 VAL 63 SER 64 THR 65 HIS 66 SER 67 THR 71 HIS 72 PHE 73 PHE 74 THR 75 LEU 76 LEU 77 SER 78 ARG 79 VAL 80 ARG 81 LYS 82 TYR 83 TYR 84 ALA 85 GLU 86 LYS 87 ASN 88 VAL 89 ALA 90 LYS 91 LEU 92 LEU 93 LYS 94 LEU 95 LEU 96 GLU 97 ASP 98 TYR 99 ALA 100 HIS 101 LYS 102 ASP 103 TYR 104 GLU 105 SER 106 THR 107 MSE 108 ILE 109 LYS 110 ALA 111 ILE 112 LEU 113 SER 114 SER 115 ILE 116 GLU 117 PRO 118 THR 119 VAL 120 GLU 121 PRO 122 SER 123 GLU 124 GLU 125 GLU 126 VAL 127 THR 128 ARG 129 LEU 130 THR 131 ASP 132 TYR 133 LEU 134 PHE 135 SER 136 VAL 137 GLU 138 GLN 139 TRP 140 GLY 141 TYR 142 TYR 143 GLU 144 ILE 145 ILE 146 LEU 147 LEU 148 GLY 149 ASN 150 CYS 151 SER 152 ARG 153 PHE 154 ILE 155 ASN 156 TYR 157 ASN 158 THR 159 LEU 160 PHE 161 LEU 162 LEU 163 THR 164 LYS 165 GLU 166 MSE 167 VAL 168 THR 169 SER 170 PHE 171 ALA 172 TYR 173 SER 174 GLU 175 GLN 176 ASN 177 LYS 178 THR 179 ASN 180 LYS 181 THR 182 LEU 183 VAL 184 THR 185 GLN 186 LEU 187 SER 188 ILE 189 ASN 190 CYS 191 LEU 192 ILE 193 ILE 194 SER 195 ILE 196 ASP 197 TYR 198 SER 199 TYR 200 PHE 201 ASP 202 HIS 203 SER 204 HIS 205 TYR 206 LEU 207 ILE 208 GLU 209 LYS 210 ILE 211 GLU 212 PHE 213 LEU 214 LEU 215 ARG 216 ASP 217 GLU 218 LEU 219 ASN 220 PHE 221 TYR 222 GLU 223 LYS 224 THR 225 VAL 226 PHE 227 LEU 228 TYR 229 VAL 230 HIS 231 GLY 232 TYR 233 TYR 234 LYS 235 LEU 236 LYS 237 GLN 238 SER 242 GLY 243 LYS 244 ASP 245 ASP 246 MSE 247 ARG 248 GLN 249 ALA 250 LEU 251 GLN 252 ILE 253 PHE 254 LYS 255 TYR 256 LEU 257 GLY 258 GLU 259 ASP 260 ALA 261 LEU 262 TYR 263 TYR 264 SER 265 TYR 266 LYS 267 GLU 268 HIS 269 TYR 270 ARG 271 LYS 272 GLU 273
Unit 5	DAL 1 MLE 2 MLE 3 MVA 4 BMT 5 ABA 6 SAR 7 MLE 8 VAL 9 MLE 10 ALA 11
Unit 6	DAL 1 MLE 2 MLE 3 MVA 4 BMT 5 ABA 6 SAR 7 MLE 8 VAL 9 MLE 10 ALA 11
Unit 7	DAL 1 MLE 2 MLE 3 MVA 4 BMT 5 ABA 6 SAR 7 MLE 8 VAL 9 MLE 10 ALA 11
Unit 8	DAL 1 MLE 2 MLE 3 MVA 4 BMT 5 ABA 6 SAR 7 MLE 8 VAL 9 MLE 10 ALA 11

Ligands

Unit 9	SO4 301 SO4 302 SO4 303 SO4 304
Unit 10	SO4 301 SO4 302
Unit 11	SO4 301 SO4 302 SO4 303
Unit 12	SO4 301 SO4 302 SO4 303 SO4 304